Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | CMUC_RS01355 | Genome accession | NZ_CP012542 |
| Coordinates | 257377..258435 (+) | Length | 352 a.a. |
| NCBI ID | WP_171993343.1 | Uniprot ID | A0A6G5QEH1 |
| Organism | Campylobacter mucosalis CCUG 21559 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 256837..299168 | 257377..258435 | within | 0 |
Gene organization within MGE regions
Location: 256837..299168
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CMUC_RS01350 (CMUC_0264) | - | 256837..257283 (+) | 447 | WP_171993342.1 | hypothetical protein | - |
| CMUC_RS01355 (CMUC_0265) | recA | 257377..258435 (+) | 1059 | WP_171993343.1 | recombinase RecA | Machinery gene |
| CMUC_RS01360 (CMUC_0266) | eno | 258432..259676 (+) | 1245 | WP_171993344.1 | phosphopyruvate hydratase | - |
| CMUC_RS01365 (CMUC_0267) | - | 259673..259957 (+) | 285 | WP_171993345.1 | septum formation initiator | - |
| CMUC_RS01370 (CMUC_0268) | - | 259954..260772 (+) | 819 | WP_171993346.1 | AMIN domain-containing protein | - |
| CMUC_RS01380 (CMUC_0270) | - | 261112..262287 (+) | 1176 | WP_171993347.1 | tyrosine-type recombinase/integrase | - |
| CMUC_RS01385 | - | 262284..262403 (-) | 120 | WP_171993348.1 | YopX family protein | - |
| CMUC_RS01390 (CMUC_0271) | - | 262384..262596 (-) | 213 | WP_171993349.1 | hypothetical protein | - |
| CMUC_RS01395 (CMUC_0272) | - | 262610..262915 (-) | 306 | WP_171993350.1 | hypothetical protein | - |
| CMUC_RS01400 (CMUC_0273) | - | 262937..263185 (-) | 249 | WP_171993351.1 | hypothetical protein | - |
| CMUC_RS01405 (CMUC_0274) | - | 263182..263586 (-) | 405 | WP_171993352.1 | YopX family protein | - |
| CMUC_RS01410 (CMUC_0275) | - | 263583..264038 (-) | 456 | WP_171993353.1 | hypothetical protein | - |
| CMUC_RS01415 (CMUC_0276) | - | 264124..264729 (-) | 606 | WP_171993354.1 | DNA cytosine methyltransferase | - |
| CMUC_RS01420 (CMUC_0277) | - | 264731..265531 (-) | 801 | WP_169753625.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| CMUC_RS01425 (CMUC_0278) | - | 265639..265848 (-) | 210 | WP_171993355.1 | hypothetical protein | - |
| CMUC_RS01430 (CMUC_0279) | - | 266405..266578 (-) | 174 | WP_171993356.1 | hypothetical protein | - |
| CMUC_RS01435 (CMUC_0280) | - | 266995..267207 (+) | 213 | WP_171993357.1 | ribbon-helix-helix protein, CopG family | - |
| CMUC_RS01440 (CMUC_0281) | - | 267200..267487 (+) | 288 | WP_171993358.1 | type II toxin-antitoxin system RelE family toxin | - |
| CMUC_RS01445 (CMUC_0282) | - | 267535..268293 (-) | 759 | WP_169753646.1 | DUF1829 domain-containing protein | - |
| CMUC_RS01450 (CMUC_0283) | - | 268293..268793 (-) | 501 | WP_169753645.1 | DUF6978 family protein | - |
| CMUC_RS01455 (CMUC_0284) | - | 268855..269526 (-) | 672 | WP_171993359.1 | LexA family transcriptional regulator | - |
| CMUC_RS01460 (CMUC_0287) | - | 270067..270249 (-) | 183 | WP_169753638.1 | hypothetical protein | - |
| CMUC_RS01465 (CMUC_0288) | - | 270454..270636 (+) | 183 | WP_171993360.1 | hypothetical protein | - |
| CMUC_RS01470 (CMUC_0289) | - | 270734..271000 (+) | 267 | WP_171993361.1 | hypothetical protein | - |
| CMUC_RS01475 (CMUC_0290) | - | 271015..271407 (+) | 393 | WP_171993362.1 | hypothetical protein | - |
| CMUC_RS01480 (CMUC_0291) | - | 271404..271772 (+) | 369 | WP_171993363.1 | hypothetical protein | - |
| CMUC_RS01485 (CMUC_0292) | - | 271754..272359 (+) | 606 | WP_171993364.1 | hypothetical protein | - |
| CMUC_RS01490 (CMUC_0293) | - | 272356..272571 (+) | 216 | WP_169753640.1 | hypothetical protein | - |
| CMUC_RS01495 (CMUC_0294) | - | 272568..272921 (+) | 354 | WP_171993365.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CMUC_RS01500 (CMUC_0295) | - | 272992..273381 (+) | 390 | WP_171993366.1 | hypothetical protein | - |
| CMUC_RS01505 (CMUC_0296) | - | 273378..274667 (+) | 1290 | WP_171993367.1 | terminase large subunit domain-containing protein | - |
| CMUC_RS01510 (CMUC_0297) | - | 274756..275034 (+) | 279 | WP_169753553.1 | resolvase | - |
| CMUC_RS01515 (CMUC_0298) | - | 275021..275287 (+) | 267 | WP_171993368.1 | hypothetical protein | - |
| CMUC_RS01520 (CMUC_0299) | - | 275288..276883 (+) | 1596 | WP_171993369.1 | portal protein | - |
| CMUC_RS01525 (CMUC_0300) | - | 276855..277046 (+) | 192 | WP_169753550.1 | hypothetical protein | - |
| CMUC_RS01530 (CMUC_0301) | - | 277039..277704 (+) | 666 | WP_171993370.1 | HIT family hydrolase | - |
| CMUC_RS01535 (CMUC_0302) | - | 277731..278048 (+) | 318 | WP_169753548.1 | hypothetical protein | - |
| CMUC_RS01540 (CMUC_0303) | - | 278048..279043 (+) | 996 | WP_171993371.1 | hypothetical protein | - |
| CMUC_RS01545 (CMUC_0304) | - | 279054..283007 (+) | 3954 | WP_171993372.1 | hypothetical protein | - |
| CMUC_RS01550 (CMUC_0305) | - | 283104..284087 (+) | 984 | WP_034967268.1 | SU10 major capsid protein | - |
| CMUC_RS01555 (CMUC_0306) | - | 284089..284478 (+) | 390 | WP_171993373.1 | hypothetical protein | - |
| CMUC_RS10275 | - | 284468..284593 (+) | 126 | WP_257791972.1 | hypothetical protein | - |
| CMUC_RS01560 (CMUC_0307) | - | 284583..286691 (+) | 2109 | WP_171993374.1 | RCC1-like domain-containing protein | - |
| CMUC_RS01565 (CMUC_0308) | - | 286705..287109 (+) | 405 | WP_171993375.1 | hypothetical protein | - |
| CMUC_RS01570 (CMUC_0309) | - | 287118..287447 (+) | 330 | WP_169753543.1 | DUF1353 domain-containing protein | - |
| CMUC_RS01575 (CMUC_0310) | - | 287450..287830 (+) | 381 | WP_171993376.1 | hypothetical protein | - |
| CMUC_RS01580 (CMUC_0311) | - | 287827..288051 (+) | 225 | WP_171993377.1 | hypothetical protein | - |
| CMUC_RS01585 (CMUC_0312) | - | 288044..288241 (+) | 198 | WP_169753650.1 | hypothetical protein | - |
| CMUC_RS01590 (CMUC_0313) | - | 288195..288524 (+) | 330 | WP_169753649.1 | hypothetical protein | - |
| CMUC_RS01595 (CMUC_0314) | - | 288763..289173 (+) | 411 | WP_171993378.1 | DUF5675 family protein | - |
| CMUC_RS01600 (CMUC_0315) | - | 289173..289412 (+) | 240 | WP_171993379.1 | hypothetical protein | - |
| CMUC_RS01605 (CMUC_0316) | - | 289402..290064 (+) | 663 | WP_169753618.1 | hypothetical protein | - |
| CMUC_RS01610 (CMUC_0317) | - | 290068..291249 (+) | 1182 | WP_171993380.1 | hypothetical protein | - |
| CMUC_RS01620 (CMUC_0319) | purN | 291536..292111 (-) | 576 | WP_171993381.1 | phosphoribosylglycinamide formyltransferase | - |
| CMUC_RS01625 (CMUC_0320) | - | 292093..293475 (-) | 1383 | WP_171993382.1 | NAD(P)H-hydrate epimerase | - |
| CMUC_RS01630 (CMUC_0321) | - | 293475..294989 (-) | 1515 | WP_171993383.1 | YifB family Mg chelatase-like AAA ATPase | - |
| CMUC_RS01635 (CMUC_0322) | def | 294986..295534 (-) | 549 | WP_169777696.1 | peptide deformylase | - |
| CMUC_RS01640 (CMUC_0323) | - | 295531..296553 (-) | 1023 | WP_171993384.1 | GGDEF domain-containing protein | - |
| CMUC_RS01645 (CMUC_0324) | clpP | 296564..297154 (-) | 591 | WP_034968337.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | - |
| CMUC_RS01650 (CMUC_0325) | tig | 297154..298482 (-) | 1329 | WP_171993385.1 | trigger factor | - |
| CMUC_RS01655 (CMUC_0326) | folE | 298596..299168 (+) | 573 | WP_034968715.1 | GTP cyclohydrolase I FolE | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37913.22 Da Isoelectric Point: 5.3320
>NTDB_id=155037 CMUC_RS01355 WP_171993343.1 257377..258435(+) (recA) [Campylobacter mucosalis CCUG 21559]
MDAEKQKALDLALKQITKDFGKGAMIKLGDKQVEPIDSIPTGSIGLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIA
EAQKAGGTCAFIDAEHALDVKYAKNLGVDTDNLYVAQPDFGEQALDMVETIARSGAIDVIVIDSVAALTPKSEIEGDMGD
QHVGLQARLMSQALRKLTGIVHKMGTMVIFINQIRMKIGQTGYGTPETTTGGNALKFYSSVRIDVRRVATLKQNEESIGN
RVKVKVVKNKVAPPFRVAEFDVMFGEGISKEGEIIDYGVKLDIVDKSGAWFSYKANKLGQGRENAKAYLKEHKDVADEII
SAIQNSIGSSNLLSGGKDDEDNEDKSKKGDDE
MDAEKQKALDLALKQITKDFGKGAMIKLGDKQVEPIDSIPTGSIGLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIA
EAQKAGGTCAFIDAEHALDVKYAKNLGVDTDNLYVAQPDFGEQALDMVETIARSGAIDVIVIDSVAALTPKSEIEGDMGD
QHVGLQARLMSQALRKLTGIVHKMGTMVIFINQIRMKIGQTGYGTPETTTGGNALKFYSSVRIDVRRVATLKQNEESIGN
RVKVKVVKNKVAPPFRVAEFDVMFGEGISKEGEIIDYGVKLDIVDKSGAWFSYKANKLGQGRENAKAYLKEHKDVADEII
SAIQNSIGSSNLLSGGKDDEDNEDKSKKGDDE
Nucleotide
Download Length: 1059 bp
>NTDB_id=155037 CMUC_RS01355 WP_171993343.1 257377..258435(+) (recA) [Campylobacter mucosalis CCUG 21559]
ATGGACGCAGAAAAACAAAAAGCCCTTGATTTGGCTTTAAAACAGATCACAAAGGACTTTGGCAAAGGCGCGATGATAAA
GCTTGGCGATAAGCAAGTTGAGCCTATAGATAGCATACCTACAGGCTCGATAGGGCTTGATTTAGCACTTGGGATAGGCG
GTGTGCCAAAGGGTCGTATCATTGAAATTTATGGACCAGAAAGCTCTGGTAAAACAACTCTGACACTTCACATAATCGCA
GAAGCCCAAAAAGCTGGTGGAACGTGTGCTTTTATAGACGCAGAACACGCTTTGGACGTTAAGTATGCTAAGAATTTAGG
TGTTGATACGGATAACCTTTATGTTGCACAACCAGACTTTGGCGAACAAGCACTTGATATGGTTGAAACTATCGCTAGAA
GTGGAGCTATCGATGTTATCGTTATAGATAGCGTCGCAGCCCTTACTCCAAAGAGCGAGATAGAGGGCGATATGGGTGAT
CAGCACGTTGGACTTCAGGCAAGACTTATGAGCCAGGCACTTAGAAAACTAACTGGTATCGTGCATAAAATGGGCACAAT
GGTTATTTTCATAAACCAAATTCGTATGAAAATAGGACAAACAGGATATGGCACACCAGAAACCACCACCGGCGGAAATG
CACTTAAATTTTACTCATCTGTTCGTATAGATGTTCGCCGTGTGGCAACGCTAAAACAAAATGAAGAGAGCATAGGAAAC
CGCGTAAAAGTCAAGGTCGTAAAAAACAAGGTCGCGCCACCATTTAGAGTTGCTGAGTTTGATGTAATGTTTGGCGAGGG
AATTAGTAAAGAGGGCGAGATTATCGATTATGGCGTGAAACTCGATATAGTCGATAAAAGCGGTGCTTGGTTTAGCTATA
AGGCAAATAAACTCGGACAAGGTCGTGAAAATGCAAAAGCCTACTTAAAAGAGCATAAAGACGTGGCTGACGAGATAATC
TCTGCAATACAAAATTCAATAGGCTCAAGCAATCTTTTAAGCGGTGGCAAAGATGATGAGGATAATGAGGACAAAAGCAA
AAAAGGAGATGACGAATGA
ATGGACGCAGAAAAACAAAAAGCCCTTGATTTGGCTTTAAAACAGATCACAAAGGACTTTGGCAAAGGCGCGATGATAAA
GCTTGGCGATAAGCAAGTTGAGCCTATAGATAGCATACCTACAGGCTCGATAGGGCTTGATTTAGCACTTGGGATAGGCG
GTGTGCCAAAGGGTCGTATCATTGAAATTTATGGACCAGAAAGCTCTGGTAAAACAACTCTGACACTTCACATAATCGCA
GAAGCCCAAAAAGCTGGTGGAACGTGTGCTTTTATAGACGCAGAACACGCTTTGGACGTTAAGTATGCTAAGAATTTAGG
TGTTGATACGGATAACCTTTATGTTGCACAACCAGACTTTGGCGAACAAGCACTTGATATGGTTGAAACTATCGCTAGAA
GTGGAGCTATCGATGTTATCGTTATAGATAGCGTCGCAGCCCTTACTCCAAAGAGCGAGATAGAGGGCGATATGGGTGAT
CAGCACGTTGGACTTCAGGCAAGACTTATGAGCCAGGCACTTAGAAAACTAACTGGTATCGTGCATAAAATGGGCACAAT
GGTTATTTTCATAAACCAAATTCGTATGAAAATAGGACAAACAGGATATGGCACACCAGAAACCACCACCGGCGGAAATG
CACTTAAATTTTACTCATCTGTTCGTATAGATGTTCGCCGTGTGGCAACGCTAAAACAAAATGAAGAGAGCATAGGAAAC
CGCGTAAAAGTCAAGGTCGTAAAAAACAAGGTCGCGCCACCATTTAGAGTTGCTGAGTTTGATGTAATGTTTGGCGAGGG
AATTAGTAAAGAGGGCGAGATTATCGATTATGGCGTGAAACTCGATATAGTCGATAAAAGCGGTGCTTGGTTTAGCTATA
AGGCAAATAAACTCGGACAAGGTCGTGAAAATGCAAAAGCCTACTTAAAAGAGCATAAAGACGTGGCTGACGAGATAATC
TCTGCAATACAAAATTCAATAGGCTCAAGCAATCTTTTAAGCGGTGGCAAAGATGATGAGGATAATGAGGACAAAAGCAA
AAAAGGAGATGACGAATGA
Similar proteins
Only experimentally validated proteins are listed.