Detailed information NTG0154996

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MS6198_RS22305
• Genome accession: NZ_CP015834
• Coordinates: 4537191..4538216 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS6198
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4532191..4543216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MS6198_RS22275 (MS6198_45340)	zapB	4532275..4532520 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
MS6198_RS22280 (MS6198_45350)	rraA	4532605..4533090 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MS6198_RS22285 (MS6198_45360)	menA	4533183..4534109 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MS6198_RS22290 (MS6198_45380)	hslU	4534176..4535507 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MS6198_RS22295 (MS6198_45390)	hslV	4535517..4536047 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MS6198_RS22300 (MS6198_45400)	ftsN	4536140..4537099 (-)	960	WP_000068834.1	cell division protein FtsN	-
MS6198_RS22305 (MS6198_45410)	cytR	4537191..4538216 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MS6198_RS22310 (MS6198_45420)	priA	4538372..4540570 (-)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
MS6198_RS22315 (MS6198_45430)	rpmE	4540773..4540985 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=154996 MS6198_RS22305 WP_000644904.1 4537191..4538216(-) (cytR) [Escherichia coli strain MS6198]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=154996 MS6198_RS22305 WP_000644904.1 4537191..4538216(-) (cytR) [Escherichia coli strain MS6198]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628