Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ACJ74_RS10505 | Genome accession | NZ_CP011915 |
| Coordinates | 2093603..2094664 (+) | Length | 353 a.a. |
| NCBI ID | WP_000963143.1 | Uniprot ID | A0AAV3H3S5 |
| Organism | Escherichia coli strain PSUO2 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2086592..2128306 | 2093603..2094664 | within | 0 |
Gene organization within MGE regions
Location: 2086592..2128306
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ74_RS10460 (ACJ74_10120) | gutQ | 2086592..2087557 (-) | 966 | WP_001287423.1 | arabinose-5-phosphate isomerase GutQ | - |
| ACJ74_RS10465 (ACJ74_10125) | srlR | 2087550..2088323 (-) | 774 | WP_000804544.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| ACJ74_RS10470 (ACJ74_10130) | gutM | 2088390..2088749 (-) | 360 | WP_000252912.1 | transcriptional regulator GutM | - |
| ACJ74_RS10475 (ACJ74_10135) | srlD | 2088855..2089634 (-) | 780 | WP_001077354.1 | sorbitol-6-phosphate dehydrogenase | - |
| ACJ74_RS10480 (ACJ74_10140) | srlB | 2089638..2090009 (-) | 372 | WP_000216207.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| ACJ74_RS10485 (ACJ74_10145) | srlE | 2090020..2090979 (-) | 960 | WP_000196936.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| ACJ74_RS10490 (ACJ74_10150) | srlA | 2090976..2091539 (-) | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| ACJ74_RS10495 (ACJ74_10155) | mltB | 2091796..2092881 (+) | 1086 | WP_000476837.1 | lytic murein transglycosylase B | - |
| ACJ74_RS10500 (ACJ74_10160) | pncC | 2093026..2093523 (+) | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| ACJ74_RS10505 (ACJ74_10165) | recA | 2093603..2094664 (+) | 1062 | WP_000963143.1 | recombinase RecA | Machinery gene |
| ACJ74_RS10510 (ACJ74_10170) | recX | 2094733..2095233 (+) | 501 | WP_000140506.1 | recombination regulator RecX | - |
| ACJ74_RS10515 (ACJ74_10180) | alaS | 2095362..2097992 (+) | 2631 | WP_000047203.1 | alanine--tRNA ligase | - |
| ACJ74_RS10520 (ACJ74_10185) | csrA | 2098227..2098412 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| ACJ74_RS10550 (ACJ74_10215) | yqaB | 2099601..2100167 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| ACJ74_RS10555 (ACJ74_10220) | yqaA | 2100164..2100592 (+) | 429 | WP_001287462.1 | YqaA family protein | - |
| ACJ74_RS10560 (ACJ74_10225) | gshA | 2100665..2102221 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| ACJ74_RS10565 (ACJ74_10230) | luxS | 2102371..2102886 (+) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | - |
| ACJ74_RS10570 (ACJ74_10235) | - | 2102937..2104049 (-) | 1113 | WP_000638134.1 | ATP-binding protein | - |
| ACJ74_RS10575 (ACJ74_10240) | - | 2104046..2104753 (-) | 708 | WP_001097131.1 | RNA ligase family protein | - |
| ACJ74_RS10580 (ACJ74_10245) | emrB | 2105011..2106549 (-) | 1539 | WP_001296316.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| ACJ74_RS10585 (ACJ74_10250) | emrA | 2106566..2107738 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| ACJ74_RS10590 (ACJ74_10255) | emrR | 2107865..2108395 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| ACJ74_RS10595 (ACJ74_10260) | ygaH | 2108486..2108821 (-) | 336 | WP_000119749.1 | L-valine transporter subunit YgaH | - |
| ACJ74_RS10600 (ACJ74_10265) | ygaZ | 2108811..2109548 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
| ACJ74_RS10605 (ACJ74_10270) | - | 2109672..2110856 (-) | 1185 | WP_000165688.1 | MFS transporter | - |
| ACJ74_RS10610 (ACJ74_10275) | proX | 2111048..2112040 (-) | 993 | WP_001216530.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| ACJ74_RS10615 (ACJ74_10280) | proW | 2112097..2113161 (-) | 1065 | WP_000774978.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| ACJ74_RS10620 (ACJ74_10285) | proV | 2113154..2114356 (-) | 1203 | WP_000985490.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| ACJ74_RS10630 (ACJ74_10290) | nrdF | 2114713..2115672 (-) | 960 | WP_000777936.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| ACJ74_RS10635 (ACJ74_10295) | nrdE | 2115682..2117826 (-) | 2145 | WP_000246583.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| ACJ74_RS10640 (ACJ74_10300) | nrdI | 2117799..2118209 (-) | 411 | WP_000080951.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| ACJ74_RS10645 (ACJ74_10305) | nrdH | 2118206..2118451 (-) | 246 | WP_001223230.1 | glutaredoxin-like protein NrdH | - |
| ACJ74_RS10650 (ACJ74_10310) | - | 2118659..2119090 (-) | 432 | WP_000209793.1 | carboxymuconolactone decarboxylase family protein | - |
| ACJ74_RS10655 (ACJ74_10315) | - | 2119178..2120512 (+) | 1335 | WP_001138429.1 | PLP-dependent aminotransferase family protein | - |
| ACJ74_RS10660 (ACJ74_10320) | ygaM | 2120569..2120898 (-) | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| ACJ74_RS10665 (ACJ74_10325) | ygaC | 2121050..2121394 (+) | 345 | WP_000281320.1 | DUF2002 family protein | - |
| ACJ74_RS10670 (ACJ74_10330) | alaE | 2121431..2121880 (-) | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| ACJ74_RS10675 (ACJ74_10335) | stpA | 2122547..2122951 (+) | 405 | WP_000115381.1 | DNA-binding protein StpA | - |
| ACJ74_RS10680 (ACJ74_10340) | ygaP | 2122998..2123522 (-) | 525 | WP_001229462.1 | thiosulfate sulfurtransferase YgaP | - |
| ACJ74_RS10685 (ACJ74_10345) | ygaV | 2123532..2123831 (-) | 300 | WP_000137284.1 | ArsR/SmtB family transcription factor | - |
| ACJ74_RS10690 (ACJ74_10350) | yqaE | 2124014..2124172 (+) | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| ACJ74_RS10695 (ACJ74_10355) | kbp | 2124256..2124705 (+) | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| ACJ74_RS10700 (ACJ74_10360) | csiR | 2124706..2125368 (-) | 663 | WP_000156817.1 | DNA-binding transcriptional regulator CsiR | - |
| ACJ74_RS10705 (ACJ74_10365) | gabP | 2125389..2126789 (-) | 1401 | WP_001298180.1 | GABA permease | - |
| ACJ74_RS10710 (ACJ74_10370) | gabT | 2127026..2128306 (-) | 1281 | WP_000097653.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
Sequence
Protein
Download Length: 353 a.a. Molecular weight: 37973.37 Da Isoelectric Point: 4.8171
>NTDB_id=149286 ACJ74_RS10505 WP_000963143.1 2093603..2094664(+) (recA) [Escherichia coli strain PSUO2]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF
Nucleotide
Download Length: 1062 bp
>NTDB_id=149286 ACJ74_RS10505 WP_000963143.1 2093603..2094664(+) (recA) [Escherichia coli strain PSUO2]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCAGAATCTTCCGGTAAAACCACGCTGACGTTGCAGGTG
ATCGCCGCAGCGCAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTCGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGG
CGCGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTTATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCGACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGGCGTAGC
AGAAACTAACGAAGATTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCAGAATCTTCCGGTAAAACCACGCTGACGTTGCAGGTG
ATCGCCGCAGCGCAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTCGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGG
CGCGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTTATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCGACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGGCGTAGC
AGAAACTAACGAAGATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.