Detailed information NTG0148893

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: L103DPR2_RS01350
• Genome accession: NZ_CP011834
• Coordinates: 307787..308815 (+)
• Length: 342 a.a.
• NCBI ID: WP_108256611.1
• Uniprot ID: -
• Organism: Limnohabitans sp. 103DPR2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 302787..313815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L103DPR2_RS01320 (L103DPR2_00261)	-	303136..303903 (+)	768	WP_055359402.1	biotin--[acetyl-CoA-carboxylase] ligase	-
L103DPR2_RS01325 (L103DPR2_00262)	-	303909..304082 (+)	174	WP_156339836.1	hypothetical protein	-
L103DPR2_RS01330 (L103DPR2_00263)	-	304079..304735 (+)	657	WP_055359404.1	glutathione S-transferase family protein	-
L103DPR2_RS01335 (L103DPR2_00264)	-	304775..306295 (-)	1521	WP_055359405.1	sensor histidine kinase N-terminal domain-containing protein	-
L103DPR2_RS01340 (L103DPR2_00265)	-	306329..307003 (-)	675	WP_055359406.1	response regulator transcription factor	-
L103DPR2_RS01345 (L103DPR2_00266)	-	307128..307646 (-)	519	WP_055359407.1	MarR family winged helix-turn-helix transcriptional regulator	-
L103DPR2_RS01350 (L103DPR2_00267)	recA	307787..308815 (+)	1029	WP_108256611.1	recombinase RecA	Machinery gene
L103DPR2_RS01355 (L103DPR2_00268)	recX	308850..309323 (+)	474	WP_055359409.1	recombination regulator RecX	-
L103DPR2_RS01360 (L103DPR2_00269)	argC	309340..310266 (-)	927	WP_055359410.1	N-acetyl-gamma-glutamyl-phosphate reductase	-
L103DPR2_RS01365 (L103DPR2_00270)	sucC	310437..311600 (+)	1164	WP_055359411.1	ADP-forming succinate--CoA ligase subunit beta	-
L103DPR2_RS01370 (L103DPR2_00271)	sucD	311605..312498 (+)	894	WP_055359412.1	succinate--CoA ligase subunit alpha	-
L103DPR2_RS01375 (L103DPR2_00272)	-	312620..313318 (+)	699	WP_055359413.1	TerC family protein	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 36649.06 Da
• Isoelectric Point: 4.8476

>NTDB_id=148893 L103DPR2_RS01350 WP_108256611.1 307787..308815(+) (recA) [Limnohabitans sp. 103DPR2]
MSDQNSDKTKALQAALAQIEKQFGKGTIMRLGEGEVIEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTL
QVIAEMQKIGGQCAFVDAEHALDIQYAQKLGVNLQDLLISQPDTGEQALEIVDSLVRSGAVDLVVIDSVAALTPKAELEG
DMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGTIKRGDDS
IGNETKVKVVKNKVAPPFKTAEFDILFGEGISRQGEIIDMGVEAKIIDKSGAWYAYNGEKIGQGRDNAREFLRENAELAA
EIENKVRESLGIPLLAEAVAAA

Nucleotide

• Length: 1029 bp

>NTDB_id=148893 L103DPR2_RS01350 WP_108256611.1 307787..308815(+) (recA) [Limnohabitans sp. 103DPR2]
ATGAGCGACCAAAACAGCGACAAAACCAAAGCCCTGCAAGCAGCCCTGGCCCAAATCGAAAAACAATTTGGCAAAGGCAC
CATCATGCGTCTGGGCGAGGGTGAAGTCATCGAAGACATCCAAGTCGTCTCAACGGGTTCTTTGGGGCTCGACATTGCCT
TGGGCGTAGGCGGTTTGCCCCGCGGCCGCGTGGTTGAAATATACGGCCCAGAGTCTTCTGGCAAAACCACCCTCACCTTG
CAAGTGATTGCCGAGATGCAAAAAATCGGCGGTCAGTGCGCCTTCGTCGACGCCGAACATGCTTTGGACATTCAGTACGC
TCAAAAGCTTGGCGTCAACCTGCAAGACCTGCTCATTAGCCAGCCCGACACCGGCGAGCAAGCCCTTGAAATTGTCGACA
GCCTGGTTCGCTCCGGCGCCGTCGACTTGGTCGTCATCGACTCCGTGGCCGCACTCACCCCCAAGGCCGAACTCGAAGGC
GACATGGGCGACTCTTTGCCCGGCCTCCAAGCCCGCCTCATGAGCCAAGCCCTGCGCAAGCTCACCGCCACCATCAAGAA
AACCAATTGCATGGTCATCTTCATCAACCAAATCCGCATGAAGATTGGCGTCATGTTCGGCTCGCCCGAAACCACCACCG
GTGGCAACGCGCTCAAGTTCTACGCTTCTGTGCGCTTGGACATCCGCCGCACCGGCACCATCAAACGAGGTGACGACTCG
ATCGGCAACGAAACCAAAGTCAAGGTGGTTAAAAACAAAGTGGCTCCGCCCTTTAAAACCGCTGAGTTCGACATTCTGTT
CGGTGAAGGCATCAGCCGCCAAGGCGAAATCATCGACATGGGTGTCGAGGCCAAAATCATCGACAAGTCAGGCGCTTGGT
ATGCCTACAACGGCGAAAAAATTGGCCAAGGCCGCGACAACGCCCGTGAGTTCCTGCGTGAAAACGCCGAACTGGCTGCC
GAAATTGAAAACAAAGTGCGTGAATCTTTGGGCATCCCACTGCTGGCTGAAGCCGTCGCAGCCGCCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (10-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	83.121	91.813	0.763
recA	Neisseria gonorrhoeae strain FA1090	71.557	97.661	0.699
recA	Neisseria gonorrhoeae MS11	71.557	97.661	0.699
recA	Neisseria gonorrhoeae MS11	71.557	97.661	0.699
recA	Pseudomonas stutzeri DSM 10701	71.166	95.322	0.678
recA	Glaesserella parasuis strain SC1401	71.207	94.444	0.673
recA	Vibrio cholerae strain A1552	67.251	100	0.673
recA	Vibrio cholerae O1 biovar El Tor strain E7946	67.251	100	0.673
recA	Acinetobacter baylyi ADP1	70.245	95.322	0.67
recA	Acinetobacter baumannii D1279779	69.939	95.322	0.667
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.976	96.784	0.658
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.173	96.199	0.646
recA	Helicobacter pylori 26695	65.854	95.906	0.632
recA	Helicobacter pylori strain NCTC11637	65.854	95.906	0.632
recA	Bacillus subtilis subsp. subtilis str. 168	66.055	95.614	0.632
recA	Latilactobacillus sakei subsp. sakei 23K	62.84	96.784	0.608
recA	Lactococcus lactis subsp. cremoris KW2	61.934	96.784	0.599
recA	Streptococcus pyogenes NZ131	62.31	96.199	0.599
recA	Streptococcus mutans UA159	61.818	96.491	0.596
recA	Streptococcus mitis SK321	61.027	96.784	0.591
recA	Streptococcus mitis NCTC 12261	60.725	96.784	0.588
recA	Streptococcus pneumoniae Rx1	60.725	96.784	0.588
recA	Streptococcus pneumoniae D39	60.725	96.784	0.588
recA	Streptococcus pneumoniae R6	60.725	96.784	0.588
recA	Streptococcus pneumoniae TIGR4	60.725	96.784	0.588
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.059	93.86	0.573