Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   AAX10_RS02035 Genome accession   NZ_CP011381
Coordinates   430627..431715 (-) Length   362 a.a.
NCBI ID   WP_036361692.1    Uniprot ID   A0A066UGG3
Organism   Moraxella bovoculi strain 58086     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 425627..436715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAX10_RS02015 (AAX10_02025) ftsA 426227..427522 (+) 1296 WP_046699694.1 cell division protein FtsA -
  AAX10_RS02020 (AAX10_02030) ftsZ 427562..428710 (+) 1149 WP_036361673.1 cell division protein FtsZ -
  AAX10_RS02025 (AAX10_02035) - 428769..429647 (+) 879 WP_226997800.1 PHP domain-containing protein -
  AAX10_RS02030 (AAX10_02040) - 429644..430582 (-) 939 WP_046699695.1 regulatory protein RecX -
  AAX10_RS02035 (AAX10_02045) recA 430627..431715 (-) 1089 WP_036361692.1 recombinase RecA Machinery gene
  AAX10_RS02040 (AAX10_02050) trmB 432377..433201 (-) 825 WP_046700555.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  AAX10_RS02045 (AAX10_02055) - 433296..434237 (+) 942 WP_036361694.1 DUF2628 domain-containing protein -
  AAX10_RS02050 (AAX10_02060) - 434239..434970 (+) 732 WP_046699696.1 TraX family protein -

Sequence

Protein


Download         Length: 362 a.a.        Molecular weight: 38906.45 Da        Isoelectric Point: 4.9823

>NTDB_id=145311 AAX10_RS02035 WP_036361692.1 430627..431715(-) (recA) [Moraxella bovoculi strain 58086]
MSTKAKDATTSVDENKEKALKAALAQIEKSFGKNTIMHLGDESAKIDVDVVSTGSLGLDIALGIGGLPKGRIIEIFGPES
SGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYARKLGVDIDKLMVSQPDNGEQALEIADMLVRSGAVDMIVVDSVAAL
TPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTG
QIKEGEDIVGSETRVKVIKNKMAPPFRQAEFQIMYGEGINRLGEVVDLGVDIGAVGKSGAWYSYGEGKIGQGKANTVKYL
AENPEVAQEIENRIRQEKMGNTAPINESHADDGEPPEFIEGM

Nucleotide


Download         Length: 1089 bp        

>NTDB_id=145311 AAX10_RS02035 WP_036361692.1 430627..431715(-) (recA) [Moraxella bovoculi strain 58086]
ATGAGCACAAAAGCGAAGGATGCGACCACCAGCGTCGATGAAAATAAAGAAAAAGCACTCAAGGCGGCACTTGCACAGAT
CGAGAAAAGCTTTGGTAAAAACACCATCATGCACCTTGGTGACGAGTCAGCAAAAATCGACGTGGATGTGGTCTCCACAG
GCTCATTAGGTCTTGATATCGCATTGGGCATCGGCGGCTTACCAAAAGGTCGTATCATTGAGATCTTCGGCCCTGAAAGC
TCTGGTAAAACCACCCTCACCCTACAGACCATCGCCGAATGCCAAAAGCAAGGCGGCACCTGTGCATTCATTGATGCTGA
GCACGCTCTAGACCCAATCTATGCGCGCAAGCTGGGCGTGGATATTGATAAGCTGATGGTCTCACAGCCCGACAACGGCG
AACAAGCCCTAGAGATTGCCGACATGCTGGTGCGCTCTGGCGCGGTGGACATGATCGTCGTGGACTCTGTGGCAGCACTC
ACCCCAAAAGCTGAGATTGAAGGCGAGATGGGCGACAGCCACATGGGTCTGCAGGCACGTCTGATGAGTCAGGCACTGCG
TAAGATCACCGGCAACGCCAAGCGCTCCAACTGCATGGTGATCTTTATTAACCAGATTCGTATGAAAATTGGTGTTATGT
TCGGTTCACCTGAGACCACGACAGGTGGTAACGCGCTTAAATTCTACGCCTCGGTGCGTTTGGATATTCGTCGCACAGGC
CAAATCAAAGAAGGCGAGGACATCGTCGGTTCAGAAACCCGCGTCAAAGTCATTAAAAACAAAATGGCACCTCCATTCCG
CCAAGCCGAATTCCAAATCATGTATGGCGAGGGCATCAACCGCCTAGGTGAAGTTGTGGATCTGGGCGTAGATATCGGTG
CGGTTGGCAAATCTGGCGCATGGTACAGCTATGGCGAAGGCAAGATCGGTCAAGGTAAAGCCAATACCGTCAAATACTTG
GCAGAGAATCCTGAAGTCGCACAAGAGATTGAAAACAGAATCCGCCAAGAGAAAATGGGCAATACCGCACCCATCAACGA
ATCTCACGCTGATGATGGTGAGCCACCTGAATTCATCGAAGGCATGTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(18-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A066UGG3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baumannii D1279779

76.724

96.133

0.738
  recA Acinetobacter baylyi ADP1

75.645

96.409

0.729
  recA Vibrio cholerae strain A1552

71.831

98.066

0.704
  recA Vibrio cholerae O1 biovar El Tor strain E7946

71.831

98.066

0.704
  recA Pseudomonas stutzeri DSM 10701

73.043

95.304

0.696
  recA Neisseria gonorrhoeae MS11

68.786

95.58

0.657
  recA Neisseria gonorrhoeae MS11

68.786

95.58

0.657
  recA Neisseria gonorrhoeae strain FA1090

68.786

95.58

0.657
  recA Glaesserella parasuis strain SC1401

69.617

93.646

0.652
  recA Ralstonia pseudosolanacearum GMI1000

71.519

87.293

0.624
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

64.826

95.028

0.616
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.426

93.37

0.583
  recA Helicobacter pylori strain NCTC11637

63.303

90.331

0.572
  recA Helicobacter pylori 26695

63.303

90.331

0.572
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

61.012

92.818

0.566
  recA Bacillus subtilis subsp. subtilis str. 168

63.158

89.227

0.564
  recA Streptococcus pneumoniae Rx1

61.728

89.503

0.552
  recA Streptococcus pneumoniae D39

61.728

89.503

0.552
  recA Streptococcus pneumoniae R6

61.728

89.503

0.552
  recA Streptococcus mitis SK321

61.728

89.503

0.552
  recA Streptococcus pneumoniae TIGR4

61.728

89.503

0.552
  recA Streptococcus mitis NCTC 12261

61.42

89.503

0.55
  recA Streptococcus pyogenes NZ131

58.631

92.818

0.544
  recA Lactococcus lactis subsp. cremoris KW2

57.434

94.751

0.544
  recA Streptococcus mutans UA159

58.036

92.818

0.539
  recA Latilactobacillus sakei subsp. sakei 23K

60.559

88.95

0.539

Multiple sequence alignment