Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   AAX11_RS08050 Genome accession   NZ_CP011379
Coordinates   1705520..1706626 (+) Length   368 a.a.
NCBI ID   WP_046697006.1    Uniprot ID   A0AAC8PV20
Organism   Moraxella bovoculi strain 33362     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1700520..1711626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAX11_RS08035 (AAX11_08035) - 1702257..1702997 (-) 741 WP_046701918.1 TraX family protein -
  AAX11_RS08040 (AAX11_08040) - 1702999..1703940 (-) 942 WP_046697005.1 DUF2628 domain-containing protein -
  AAX11_RS08045 (AAX11_08045) trmB 1704035..1704859 (+) 825 WP_046697574.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  AAX11_RS08050 (AAX11_08050) recA 1705520..1706626 (+) 1107 WP_046697006.1 recombinase RecA Machinery gene
  AAX11_RS08055 (AAX11_08055) - 1706653..1707591 (+) 939 WP_046697007.1 regulatory protein RecX -
  AAX11_RS08060 (AAX11_08060) - 1707588..1708466 (-) 879 WP_227503097.1 PHP domain-containing protein -
  AAX11_RS08065 (AAX11_08065) ftsZ 1708523..1709671 (-) 1149 WP_046697009.1 cell division protein FtsZ -
  AAX11_RS08070 (AAX11_08070) ftsA 1709711..1711006 (-) 1296 WP_046701919.1 cell division protein FtsA -

Sequence

Protein


Download         Length: 368 a.a.        Molecular weight: 39567.13 Da        Isoelectric Point: 4.7715

>NTDB_id=145290 AAX11_RS08050 WP_046697006.1 1705520..1706626(+) (recA) [Moraxella bovoculi strain 33362]
MSTKAKDATTSVDENKEKALKAALAQIEKSFGKNTIMYLGDESAKIDVDVVSTGSLGLDIALGIGGLPKGRIIEIFGPES
SGKTTLTLQTIAECQKQGGTCAFIDAEHALDPIYARKLGVDIDKLMVSQPDNGEQALEIADMLVRSGAVDMIVVDSVAAL
TPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTG
QIKEGEGIVGSETRVKVIKNKMAPPFRQAEFQIMYGEGINRLGEVVDLGVDIGAVGKSGAWYSYGEGKIGQGKANTVKYL
AENPDVAQEIENRIRQEKMGNTAPISESHADDGEPPEFIEGMEDDNLF

Nucleotide


Download         Length: 1107 bp        

>NTDB_id=145290 AAX11_RS08050 WP_046697006.1 1705520..1706626(+) (recA) [Moraxella bovoculi strain 33362]
ATGAGCACAAAAGCGAAGGATGCGACCACCAGCGTCGATGAAAATAAAGAAAAAGCACTCAAGGCGGCACTTGCACAGAT
CGAGAAAAGCTTTGGTAAAAACACCATCATGTACCTTGGTGACGAGTCAGCAAAAATCGACGTGGATGTGGTCTCCACAG
GCTCATTAGGTCTTGATATTGCATTGGGCATTGGCGGCTTACCAAAAGGTCGTATCATTGAGATCTTCGGCCCTGAAAGC
TCTGGCAAAACCACCCTCACCCTACAGACCATCGCCGAATGCCAAAAGCAAGGCGGCACCTGTGCATTCATTGATGCTGA
GCACGCTCTAGATCCAATCTATGCGCGCAAGCTAGGCGTGGATATTGATAAGCTGATGGTCTCGCAGCCCGACAACGGCG
AACAAGCCCTAGAGATCGCTGACATGCTGGTGCGCTCTGGCGCGGTGGACATGATCGTCGTGGACTCTGTGGCAGCACTC
ACCCCAAAAGCTGAGATTGAAGGCGAGATGGGCGACAGCCACATGGGCTTGCAGGCACGTCTGATGAGTCAGGCACTGCG
TAAGATCACCGGCAACGCCAAGCGCTCCAACTGCATGGTGATCTTTATTAACCAGATTCGTATGAAAATTGGTGTTATGT
TCGGTTCACCTGAGACCACAACAGGTGGTAACGCGCTTAAATTCTACGCCTCGGTGCGTTTGGATATTCGTCGCACAGGC
CAAATCAAAGAAGGCGAGGGCATCGTCGGTTCAGAAACCCGCGTCAAAGTCATTAAAAACAAAATGGCACCTCCATTCCG
CCAAGCCGAATTCCAAATCATGTATGGCGAGGGCATCAACCGCCTAGGTGAAGTTGTGGATCTGGGCGTAGATATCGGTG
CGGTTGGCAAATCTGGCGCATGGTACAGCTATGGCGAAGGCAAGATCGGTCAAGGTAAAGCCAATACCGTCAAATACTTG
GCAGAGAATCCTGACGTCGCACAAGAGATTGAAAACAGAATCCGCCAAGAGAAAATGGGCAATACCGCACCCATCAGCGA
ATCTCACGCTGATGATGGTGAGCCACCTGAATTCATCGAAGGCATGGAAGATGACAACCTGTTTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(18-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baumannii D1279779

76.724

94.565

0.726
  recA Acinetobacter baylyi ADP1

75.645

94.837

0.717
  recA Vibrio cholerae strain A1552

71.549

96.467

0.69
  recA Vibrio cholerae O1 biovar El Tor strain E7946

71.549

96.467

0.69
  recA Pseudomonas stutzeri DSM 10701

72.754

93.75

0.682
  recA Neisseria gonorrhoeae strain FA1090

68.497

94.022

0.644
  recA Neisseria gonorrhoeae MS11

68.497

94.022

0.644
  recA Neisseria gonorrhoeae MS11

68.497

94.022

0.644
  recA Glaesserella parasuis strain SC1401

66.949

96.196

0.644
  recA Ralstonia pseudosolanacearum GMI1000

71.203

85.87

0.611
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

64.826

93.478

0.606
  recA Helicobacter pylori strain NCTC11637

60.734

96.196

0.584
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.426

91.848

0.573
  recA Helicobacter pylori 26695

63.303

88.859

0.563
  recA Bacillus subtilis subsp. subtilis str. 168

63.158

87.772

0.554
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.417

91.304

0.552
  recA Streptococcus mitis NCTC 12261

59.357

92.935

0.552
  recA Streptococcus mitis SK321

61.42

88.043

0.541
  recA Streptococcus pneumoniae Rx1

61.42

88.043

0.541
  recA Streptococcus pneumoniae D39

61.42

88.043

0.541
  recA Streptococcus pneumoniae R6

61.42

88.043

0.541
  recA Streptococcus pneumoniae TIGR4

61.42

88.043

0.541
  recA Lactococcus lactis subsp. cremoris KW2

58.017

93.207

0.541
  recA Streptococcus pyogenes NZ131

58.631

91.304

0.535
  recA Latilactobacillus sakei subsp. sakei 23K

60.559

87.5

0.53
  recA Streptococcus mutans UA159

57.738

91.304

0.527

Multiple sequence alignment