Detailed information NTG0145160

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: TVD_RS09205
• Genome accession: NZ_CP011367
• Coordinates: 1980115..1981161 (-)
• Length: 348 a.a.
• NCBI ID: WP_018144305.1
• Uniprot ID: A0A0G3G9K1
• Organism: Thioalkalivibrio versutus strain D301
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1975115..1986161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TVD_RS09190 (TVD_09190)	alaS	1975828..1978437 (-)	2610	WP_047251435.1	alanine--tRNA ligase	-
TVD_RS09195 (TVD_09195)	-	1978907..1979197 (-)	291	WP_047251436.1	GIY-YIG nuclease family protein	-
TVD_RS09200 (TVD_09200)	-	1979661..1980140 (-)	480	WP_047251437.1	regulatory protein RecX	-
TVD_RS09205 (TVD_09205)	recA	1980115..1981161 (-)	1047	WP_018144305.1	recombinase RecA	Machinery gene
TVD_RS09210 (TVD_09210)	-	1981390..1984710 (-)	3321	WP_240472308.1	mechanosensitive ion channel domain-containing protein	-
TVD_RS09215 (TVD_09215)	-	1985431..1985955 (-)	525	WP_047251439.1	CinA family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37621.01 Da
• Isoelectric Point: 5.2053

>NTDB_id=145160 TVD_RS09205 WP_018144305.1 1980115..1981161(-) (recA) [Thioalkalivibrio versutus strain D301]
MDDNRKKALTAALGQIERQFGKGAVMRMGDQEAVDVPAISTGSLALDIALGIGGVPRGRVVEIYGPESSGKTTLTLQVIA
EAQKAGGTAAFVDAEHALDPTYAEKLGVNVDDLLVSQPDTGEQALEISDMLVRSGAIDVVVVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRMDIRRIGAIKKGDEVIGNE
TRVKVVKNKMAPPFREAYFEILYGEGISRVGEIIEMGVKEGLIDKAGAWYSYNGERIGQGKENARQYLKDNPHIAEEVEK
TLRERLLPKRNKATVEDVPVDAPVEEQG

Nucleotide

• Length: 1047 bp

>NTDB_id=145160 TVD_RS09205 WP_018144305.1 1980115..1981161(-) (recA) [Thioalkalivibrio versutus strain D301]
GTGGACGACAATCGCAAGAAGGCCCTGACCGCCGCACTCGGGCAGATCGAACGCCAATTCGGCAAGGGCGCGGTCATGCG
CATGGGCGATCAGGAGGCGGTGGACGTCCCCGCGATCTCTACGGGCTCCCTGGCACTGGATATCGCGCTTGGCATCGGCG
GTGTGCCGCGCGGGCGTGTGGTCGAGATCTACGGGCCGGAGTCCTCGGGCAAGACGACCCTGACACTGCAGGTGATCGCC
GAGGCGCAAAAGGCCGGCGGTACGGCTGCGTTTGTCGACGCCGAACACGCACTGGACCCGACCTACGCCGAAAAGCTGGG
TGTGAACGTGGACGACCTGCTGGTCTCGCAGCCGGATACCGGCGAGCAGGCCCTGGAGATCTCCGACATGCTGGTGCGTT
CCGGCGCGATCGACGTCGTGGTCGTCGACTCCGTGGCTGCGCTCACGCCCAAGGCCGAGATCGAGGGCGAGATGGGCGAC
TCCCACGTCGGCCTGCAGGCGCGGCTGATGTCGCAGGCCCTGCGCAAGCTGACCGCCAACATCAAGCGTTCCAACACGCT
GGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCCGAGACCACCACCGGCGGCAACGCGC
TCAAGTTCTACTCCTCCGTGCGCATGGACATCCGCCGCATCGGCGCGATCAAGAAGGGCGACGAGGTCATCGGCAACGAG
ACCCGTGTGAAGGTCGTGAAGAACAAGATGGCGCCCCCATTCCGCGAGGCCTATTTCGAGATCCTCTACGGCGAGGGCAT
CTCCCGCGTTGGCGAGATCATCGAGATGGGCGTGAAGGAAGGCCTGATCGACAAGGCCGGCGCCTGGTACAGCTACAACG
GCGAGCGCATCGGCCAGGGCAAGGAAAACGCCCGCCAGTACCTGAAGGACAATCCGCATATCGCCGAGGAAGTCGAAAAG
ACGCTGCGCGAACGCCTGCTGCCCAAGCGCAACAAGGCCACGGTAGAGGACGTGCCGGTCGATGCCCCGGTCGAGGAGCA
AGGCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A0G3G9K1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	77.064	93.966	0.724
recA	Acinetobacter baylyi ADP1	73.653	95.977	0.707
recA	Ralstonia pseudosolanacearum GMI1000	72.239	96.264	0.695
recA	Vibrio cholerae O1 biovar El Tor strain E7946	72.81	95.115	0.693
recA	Vibrio cholerae strain A1552	72.81	95.115	0.693
recA	Acinetobacter baumannii D1279779	71.429	96.552	0.69
recA	Glaesserella parasuis strain SC1401	68.012	99.713	0.678
recA	Neisseria gonorrhoeae MS11	72.84	93.103	0.678
recA	Neisseria gonorrhoeae MS11	72.84	93.103	0.678
recA	Neisseria gonorrhoeae strain FA1090	72.84	93.103	0.678
recA	Helicobacter pylori strain NCTC11637	61.782	100	0.618
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.881	96.264	0.615
recA	Helicobacter pylori 26695	61.207	100	0.612
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.526	93.966	0.606
recA	Streptococcus mutans UA159	64.308	93.391	0.601
recA	Latilactobacillus sakei subsp. sakei 23K	61.652	97.414	0.601
recA	Streptococcus pneumoniae Rx1	57.939	100	0.598
recA	Streptococcus pneumoniae D39	57.939	100	0.598
recA	Streptococcus pneumoniae R6	57.939	100	0.598
recA	Streptococcus pneumoniae TIGR4	57.939	100	0.598
recA	Bacillus subtilis subsp. subtilis str. 168	64.596	92.529	0.598
recA	Streptococcus pyogenes NZ131	61.89	94.253	0.583
recA	Streptococcus mitis NCTC 12261	62.229	92.816	0.578
recA	Streptococcus mitis SK321	61.92	92.816	0.575
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.494	93.103	0.563
recA	Lactococcus lactis subsp. cremoris KW2	59.443	92.816	0.552