Detailed information NTG0141837

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: KO116_RS17735
• Genome accession: NZ_CP011052
• Coordinates: 3888189..3889262 (-)
• Length: 357 a.a.
• NCBI ID: WP_035564432.1
• Uniprot ID: A0A0D5M7L3
• Organism: Halomonas sp. KO116
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3883189..3894262

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KO116_RS17720 (KO116_03577)	-	3883501..3884751 (-)	1251	WP_035564424.1	aspartate kinase	-
KO116_RS17725 (KO116_03578)	alaS	3884848..3887457 (-)	2610	WP_035564427.1	alanine--tRNA ligase	-
KO116_RS17730 (KO116_03579)	-	3887700..3888164 (-)	465	WP_035564430.1	regulatory protein RecX	-
KO116_RS17735 (KO116_03580)	recA	3888189..3889262 (-)	1074	WP_035564432.1	recombinase RecA	Machinery gene
KO116_RS17740 (KO116_03581)	-	3889373..3889900 (-)	528	WP_035564434.1	CinA family protein	-
KO116_RS17745 (KO116_03582)	mutS	3889984..3892545 (+)	2562	WP_035564436.1	DNA mismatch repair protein MutS	-
KO116_RS17750 (KO116_03583)	fdxA	3892712..3893035 (+)	324	WP_008957517.1	ferredoxin FdxA	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38289.81 Da
• Isoelectric Point: 5.1514

>NTDB_id=141837 KO116_RS17735 WP_035564432.1 3888189..3889262(-) (recA) [Halomonas sp. KO116]
MAQDDNRTKALNAALTQIDRQFGKGTVMRLGDAPRVVMPSVSTGSLGLDIALGIGGLPFGRVAEIFGPESSGKTTLTLSV
IAQAQKQGKVCAFVDAEHALDPSYAEKLGVNLDDLLISQPDTGEQALEITDMLVRSGGVDVIVIDSVAALTPRAEIEGEM
GDTHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGSVKVGDEVTG
NETRVKVVKNKVAPPFRQAEFQILYGKGIYHAGEVIDLGVQCNLVDKAGAWYSYKGKKIGQGKANSALYLEEHPDIMLEI
ETQIREQLLAKPDPKKEKEGAPAEAAAEVDANDDDLL

Nucleotide

• Length: 1074 bp

>NTDB_id=141837 KO116_RS17735 WP_035564432.1 3888189..3889262(-) (recA) [Halomonas sp. KO116]
ATGGCTCAGGATGACAACCGCACTAAAGCGCTAAACGCTGCACTCACCCAAATCGACCGTCAGTTCGGCAAGGGCACCGT
CATGCGTCTAGGCGACGCACCGCGTGTGGTCATGCCGTCGGTTTCCACGGGTTCGTTGGGTCTGGATATCGCACTTGGCA
TCGGCGGGCTGCCGTTTGGCCGCGTGGCTGAAATTTTTGGTCCGGAGTCCTCGGGTAAGACAACGCTGACCCTTTCGGTG
ATTGCGCAAGCGCAAAAGCAAGGCAAAGTGTGTGCGTTCGTGGATGCCGAGCACGCTCTGGATCCGAGCTATGCCGAAAA
GCTAGGCGTCAACCTGGATGATCTACTGATTTCCCAGCCGGACACTGGCGAGCAGGCGTTAGAAATTACCGACATGCTGG
TGCGCTCCGGCGGTGTTGACGTGATTGTTATCGACTCTGTCGCTGCGTTGACCCCGCGCGCTGAAATCGAAGGCGAAATG
GGCGATACCCATGTTGGCCTACAGGCACGTTTGATGTCTCAAGCGCTGCGTAAGATCACTGGCAATATTAAAAATGCTAA
CTGCCTAGTGATCTTTATCAACCAGATTCGCATGAAGATCGGCGTGATGTTTGGTTCACCCGAAACCACTACCGGCGGTA
ACGCGCTTAAGTTCTACGCCAGCGTACGTCTGGATATTCGCCGCACCGGCTCGGTGAAAGTAGGTGATGAAGTCACCGGT
AACGAAACCCGCGTGAAAGTAGTCAAAAACAAGGTGGCACCGCCATTCCGCCAAGCTGAATTCCAGATTCTTTACGGCAA
GGGTATCTACCATGCTGGCGAGGTTATTGACCTGGGCGTGCAGTGCAATCTGGTCGATAAAGCCGGTGCCTGGTACAGCT
ATAAAGGCAAGAAAATCGGTCAGGGTAAAGCAAACTCCGCGCTTTATCTGGAAGAGCATCCAGACATTATGCTCGAAATT
GAAACGCAGATTCGTGAGCAGCTCTTGGCCAAGCCTGATCCTAAAAAGGAGAAGGAGGGTGCCCCTGCCGAAGCAGCGGC
TGAAGTGGATGCCAACGATGACGATCTGCTCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-269)

3D structure

• AlphaFold DB: A0A0D5M7L3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	82.209	91.317	0.751
recA	Acinetobacter baylyi ADP1	75.61	91.877	0.695
recA	Acinetobacter baumannii D1279779	74.233	91.317	0.678
recA	Vibrio cholerae strain A1552	70.859	91.317	0.647
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.859	91.317	0.647
recA	Neisseria gonorrhoeae MS11	70.497	90.196	0.636
recA	Neisseria gonorrhoeae MS11	70.497	90.196	0.636
recA	Neisseria gonorrhoeae strain FA1090	70.497	90.196	0.636
recA	Glaesserella parasuis strain SC1401	68.997	92.157	0.636
recA	Ralstonia pseudosolanacearum GMI1000	72.063	88.235	0.636
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.724	91.317	0.591
recA	Helicobacter pylori 26695	62.614	92.157	0.577
recA	Helicobacter pylori strain NCTC11637	62.006	92.157	0.571
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.534	94.398	0.571
recA	Bacillus subtilis subsp. subtilis str. 168	62.112	90.196	0.56
recA	Streptococcus pneumoniae TIGR4	58.896	91.317	0.538
recA	Streptococcus pneumoniae Rx1	58.896	91.317	0.538
recA	Streptococcus pneumoniae D39	58.896	91.317	0.538
recA	Streptococcus pneumoniae R6	58.896	91.317	0.538
recA	Streptococcus mitis NCTC 12261	58.589	91.317	0.535
recA	Streptococcus mutans UA159	55.556	95.798	0.532
recA	Streptococcus pyogenes NZ131	58.462	91.036	0.532
recA	Latilactobacillus sakei subsp. sakei 23K	58.462	91.036	0.532
recA	Streptococcus mitis SK321	58.282	91.317	0.532
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.538	91.036	0.524
recA	Lactococcus lactis subsp. cremoris KW2	57.231	91.036	0.521