Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | EHS42_RS06440 | Genome accession | NZ_CP010350 |
| Coordinates | 1314761..1315804 (-) | Length | 347 a.a. |
| NCBI ID | WP_005401034.1 | Uniprot ID | A0A1T1JM42 |
| Organism | Acinetobacter johnsonii XBB1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1314761..1352700 | 1314761..1315804 | within | 0 |
Gene organization within MGE regions
Location: 1314761..1352700
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHS42_RS06440 (RZ95_06405) | recA | 1314761..1315804 (-) | 1044 | WP_005401034.1 | recombinase RecA | Machinery gene |
| EHS42_RS06445 (RZ95_06410) | - | 1315919..1316362 (-) | 444 | WP_004696588.1 | RNA-binding S4 domain-containing protein | - |
| EHS42_RS06450 (RZ95_06415) | - | 1316355..1317029 (-) | 675 | WP_058951739.1 | HAD-IA family hydrolase | - |
| EHS42_RS06455 (RZ95_06420) | - | 1317252..1318553 (+) | 1302 | WP_058951740.1 | tyrosine-type recombinase/integrase | - |
| EHS42_RS20500 (RZ95_06425) | - | 1318463..1318684 (-) | 222 | WP_081316816.1 | hypothetical protein | - |
| EHS42_RS06465 (RZ95_06430) | - | 1318685..1319218 (-) | 534 | WP_101598937.1 | class I SAM-dependent methyltransferase | - |
| EHS42_RS06470 (RZ95_06435) | - | 1319199..1319420 (-) | 222 | WP_058951741.1 | hypothetical protein | - |
| EHS42_RS06475 (RZ95_06440) | - | 1319462..1321132 (-) | 1671 | WP_058951742.1 | hypothetical protein | - |
| EHS42_RS06480 (RZ95_06445) | - | 1321148..1322026 (-) | 879 | WP_058951743.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| EHS42_RS06485 (RZ95_06450) | - | 1322031..1322249 (-) | 219 | WP_058951744.1 | hypothetical protein | - |
| EHS42_RS20190 | - | 1322442..1322609 (+) | 168 | WP_164996882.1 | hypothetical protein | - |
| EHS42_RS06490 (RZ95_06455) | - | 1322611..1322793 (-) | 183 | WP_129556768.1 | hypothetical protein | - |
| EHS42_RS06495 (RZ95_RS06435) | - | 1322844..1323200 (-) | 357 | WP_058951746.1 | hypothetical protein | - |
| EHS42_RS06500 (RZ95_06465) | - | 1323200..1323886 (-) | 687 | WP_058951747.1 | XRE family transcriptional regulator | - |
| EHS42_RS06505 (RZ95_06470) | - | 1324016..1324219 (+) | 204 | WP_058951748.1 | helix-turn-helix domain-containing protein | - |
| EHS42_RS06510 (RZ95_06475) | - | 1324191..1324547 (+) | 357 | WP_409410467.1 | hypothetical protein | - |
| EHS42_RS06515 (RZ95_06480) | - | 1324567..1324851 (+) | 285 | WP_058951749.1 | hypothetical protein | - |
| EHS42_RS06520 (RZ95_06485) | - | 1324848..1325891 (+) | 1044 | WP_058951750.1 | hypothetical protein | - |
| EHS42_RS20195 | - | 1325888..1326058 (+) | 171 | WP_164996883.1 | hypothetical protein | - |
| EHS42_RS06525 (RZ95_06490) | - | 1326061..1326573 (+) | 513 | WP_058951751.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EHS42_RS06530 (RZ95_06495) | - | 1326570..1326986 (+) | 417 | WP_058951752.1 | hypothetical protein | - |
| EHS42_RS06535 (RZ95_RS06475) | - | 1327658..1328212 (+) | 555 | WP_058951753.1 | hypothetical protein | - |
| EHS42_RS06540 (RZ95_06505) | - | 1328291..1328737 (+) | 447 | WP_058951754.1 | hypothetical protein | - |
| EHS42_RS06545 (RZ95_06510) | - | 1328740..1328919 (+) | 180 | WP_004979902.1 | hypothetical protein | - |
| EHS42_RS06550 (RZ95_06515) | - | 1328919..1330562 (+) | 1644 | WP_058951755.1 | portal protein | - |
| EHS42_RS06555 (RZ95_RS20650) | - | 1330559..1330984 (+) | 426 | WP_101598938.1 | hypothetical protein | - |
| EHS42_RS06560 (RZ95_06525) | - | 1330977..1331657 (+) | 681 | WP_058951756.1 | hypothetical protein | - |
| EHS42_RS06565 (RZ95_06530) | - | 1331674..1332573 (+) | 900 | WP_058952508.1 | phage capsid protein | - |
| EHS42_RS06570 (RZ95_06535) | - | 1332647..1332847 (+) | 201 | WP_058951757.1 | hypothetical protein | - |
| EHS42_RS06575 (RZ95_06540) | - | 1332906..1333469 (+) | 564 | WP_058951758.1 | hypothetical protein | - |
| EHS42_RS06580 (RZ95_06545) | - | 1333469..1335538 (+) | 2070 | WP_058951759.1 | hypothetical protein | - |
| EHS42_RS06585 (RZ95_06550) | - | 1335541..1335990 (+) | 450 | WP_058951760.1 | GNAT family N-acetyltransferase | - |
| EHS42_RS06590 (RZ95_06555) | - | 1335993..1336478 (+) | 486 | WP_058951761.1 | hypothetical protein | - |
| EHS42_RS06595 (RZ95_06560) | - | 1336478..1336948 (+) | 471 | WP_058951762.1 | hypothetical protein | - |
| EHS42_RS06600 (RZ95_06565) | - | 1336948..1339017 (+) | 2070 | WP_058951763.1 | hypothetical protein | - |
| EHS42_RS06605 (RZ95_06570) | - | 1339017..1341872 (+) | 2856 | WP_058951764.1 | hypothetical protein | - |
| EHS42_RS06610 (RZ95_06575) | - | 1341993..1342610 (+) | 618 | WP_058951765.1 | super-infection exclusion protein B | - |
| EHS42_RS06615 (RZ95_06580) | - | 1342685..1345210 (+) | 2526 | WP_058951766.1 | hypothetical protein | - |
| EHS42_RS06620 (RZ95_06585) | - | 1345213..1345560 (+) | 348 | WP_058951767.1 | hypothetical protein | - |
| EHS42_RS06625 (RZ95_06590) | - | 1345622..1345957 (+) | 336 | WP_058951768.1 | hypothetical protein | - |
| EHS42_RS06630 (RZ95_06595) | terL | 1345957..1347606 (+) | 1650 | WP_058951769.1 | phage terminase large subunit | - |
| EHS42_RS20370 (RZ95_06600) | - | 1347618..1349807 (+) | 2190 | WP_058951770.1 | hypothetical protein | - |
| EHS42_RS06640 (RZ95_06605) | - | 1349834..1351771 (-) | 1938 | WP_058951771.1 | acyltransferase family protein | - |
| EHS42_RS06645 (RZ95_06610) | - | 1351920..1352207 (+) | 288 | WP_058951772.1 | holin | - |
| EHS42_RS06650 (RZ95_06615) | - | 1352191..1352700 (+) | 510 | WP_058951773.1 | lysozyme | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37602.01 Da Isoelectric Point: 5.0433
>NTDB_id=136555 EHS42_RS06440 WP_005401034.1 1314761..1315804(-) (recA) [Acinetobacter johnsonii XBB1]
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGDKIGQGKNNVIRHLEENPQLAETIEK
IIREKLLTTANAAPVEENEEEPDFLDA
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGDKIGQGKNNVIRHLEENPQLAETIEK
IIREKLLTTANAAPVEENEEEPDFLDA
Nucleotide
Download Length: 1044 bp
>NTDB_id=136555 EHS42_RS06440 WP_005401034.1 1314761..1315804(-) (recA) [Acinetobacter johnsonii XBB1]
ATGGATGATAATAAAAGCAAGGCGCTCAATGCTGCGCTAAGCCAAATTGAAAAGCAGTTTGGTAAAAACACAGTAATGCG
TCTTGGCGATAACACCGTACAAGCTGTTGAAGCGGTATCAACGGGTTCTTTGACACTTGATATTGCTCTAGGCATAGGCG
GCTTACCGAAGGGTCGTATCGTTGAGATTTATGGTCCTGAATCTTCAGGTAAAACAACCATGACTTTACAAGCGATTGCC
GAATGTCAAAAAGCAGGTGGTACATGTGCATTTATCGATGCAGAACATGCTTTAGACCCACAGTATGCGCGTAAACTTGG
CGTAGATATTGACAATCTCTTGGTTTCTCAGCCTGACCATGGTGAGCAAGCACTTGAAATTGCAGACATGCTGGTTCGCT
CTGGTGCCATTGACCTCATCGTTGTCGACTCTGTTGCAGCATTGACACCACGTGCAGAAATTGAAGGTGAAATGGGCGAC
TCACACATGGGTCTCCAAGCACGTTTAATGAGCCAAGCATTACGTAAAATTACAGGTAATGCAAAACGTTCAAACTGTAT
GGTGATTTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAGCCCTGAAACTACCACTGGTGGTAATGCGT
TGAAATTCTATGCGTCTGTGCGTTTAGACATTCGCCGCGTAGGTCAGGTCAAAGAAGGCGATGAAATCGTTGGTTCTGAA
ACCAAAGTGAAAGTTGTCAAAAACAAAATGGCACCTCCATTCCGCGAAGCACTCTTCCAAATTTTATATGGTAAAGGCGT
CAATCACTTAGGCGAACTTGTAGACTTGGCTGTTCAACAAGAAATCGTACAAAAAGCAGGTGCTTGGTATTCATACCAAG
GCGACAAAATCGGTCAAGGTAAAAACAATGTGATCCGTCACCTTGAAGAAAACCCTCAGTTGGCTGAAACCATTGAGAAA
ATCATTCGAGAAAAACTACTGACGACTGCAAACGCTGCGCCTGTAGAAGAGAATGAAGAAGAGCCAGACTTTTTAGATGC
TTAA
ATGGATGATAATAAAAGCAAGGCGCTCAATGCTGCGCTAAGCCAAATTGAAAAGCAGTTTGGTAAAAACACAGTAATGCG
TCTTGGCGATAACACCGTACAAGCTGTTGAAGCGGTATCAACGGGTTCTTTGACACTTGATATTGCTCTAGGCATAGGCG
GCTTACCGAAGGGTCGTATCGTTGAGATTTATGGTCCTGAATCTTCAGGTAAAACAACCATGACTTTACAAGCGATTGCC
GAATGTCAAAAAGCAGGTGGTACATGTGCATTTATCGATGCAGAACATGCTTTAGACCCACAGTATGCGCGTAAACTTGG
CGTAGATATTGACAATCTCTTGGTTTCTCAGCCTGACCATGGTGAGCAAGCACTTGAAATTGCAGACATGCTGGTTCGCT
CTGGTGCCATTGACCTCATCGTTGTCGACTCTGTTGCAGCATTGACACCACGTGCAGAAATTGAAGGTGAAATGGGCGAC
TCACACATGGGTCTCCAAGCACGTTTAATGAGCCAAGCATTACGTAAAATTACAGGTAATGCAAAACGTTCAAACTGTAT
GGTGATTTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAGCCCTGAAACTACCACTGGTGGTAATGCGT
TGAAATTCTATGCGTCTGTGCGTTTAGACATTCGCCGCGTAGGTCAGGTCAAAGAAGGCGATGAAATCGTTGGTTCTGAA
ACCAAAGTGAAAGTTGTCAAAAACAAAATGGCACCTCCATTCCGCGAAGCACTCTTCCAAATTTTATATGGTAAAGGCGT
CAATCACTTAGGCGAACTTGTAGACTTGGCTGTTCAACAAGAAATCGTACAAAAAGCAGGTGCTTGGTATTCATACCAAG
GCGACAAAATCGGTCAAGGTAAAAACAATGTGATCCGTCACCTTGAAGAAAACCCTCAGTTGGCTGAAACCATTGAGAAA
ATCATTCGAGAAAAACTACTGACGACTGCAAACGCTGCGCCTGTAGAAGAGAATGAAGAAGAGCCAGACTTTTTAGATGC
TTAA
Similar proteins
Only experimentally validated proteins are listed.