Detailed information NTG0132452

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: XFC3_RS00455
• Genome accession: NZ_CP009829
• Coordinates: 117800..118843 (+)
• Length: 347 a.a.
• NCBI ID: WP_010892669.1
• Uniprot ID: Q9PH23
• Organism: Xylella fastidiosa strain 3124
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 112800..123843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XFC3_RS00440 (XFC3_00485)	-	113429..114457 (-)	1029	WP_010892665.1	right-handed parallel beta-helix repeat-containing protein	-
XFC3_RS00445 (XFC3_00490)	-	115479..116510 (+)	1032	WP_023906042.1	nitronate monooxygenase family protein	-
XFC3_RS00450 (XFC3_00495)	lexA	116983..117618 (+)	636	WP_023906043.1	transcriptional repressor LexA	-
XFC3_RS00455 (XFC3_00500)	recA	117800..118843 (+)	1044	WP_010892669.1	recombinase RecA	Machinery gene
XFC3_RS00460 (XFC3_00505)	alaS	119342..121995 (+)	2654	Protein_84	alanine--tRNA ligase	-
XFC3_RS00465 (XFC3_00510)	csrA	122134..122349 (+)	216	WP_004085529.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37610.29 Da
• Isoelectric Point: 5.0879

>NTDB_id=132452 XFC3_RS00455 WP_010892669.1 117800..118843(+) (recA) [Xylella fastidiosa strain 3124]
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
QCQKKGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSIDIMVIDSVAALTPRAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGVMMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIGQGKDNARGYLRENPHLAAKL
EADLREKFEPTELSREEGDEDTLEDTM

Nucleotide

• Length: 1044 bp

>NTDB_id=132452 XFC3_RS00455 WP_010892669.1 117800..118843(+) (recA) [Xylella fastidiosa strain 3124]
ATGGATGAGAACAAGAAACGCGCCCTTTCTGTCGCTTTAAGCCAGATTGAAAAACAGTTCGGCAAGGGGTCCGTGATGCG
GATGGGCGATCGCGTGATCGAGGCCGTAGAGGCGATCCCGACAGGTTCGCTCATGTTGGATCTGGCCCTGGGGATCGGTG
GTTTGCCAAAGGGACGTGTCGTGGAAATCTATGGGCCGGAATCTTCTGGGAAGACCACATTGACTTTGCAGGCGATCGCT
CAATGCCAGAAGAAGGGAGGTACAGCAGCGTTCATTGATGCTGAGCATGCCTTGGATCCGATTTATGCGGGCAAGTTAGG
CGTCAATGTTGATGATTTGTTGTTGTCTCAGCCAGATACTGGGGAGCAGGCTCTGGAAATCGCTGACATGCTGGTGCGCT
CGGGGTCGATCGATATCATGGTCATTGATTCGGTTGCGGCACTCACGCCAAGGGCGGAGATTGAGGGTGAGATGGGAGAT
CAGTTGCCCGGTCTTCAGGCGCGCTTGATGAGCCAGGCACTGCGTAAATTGACCGGCAATATCAAGCGCTCTAATACGCT
GGTGATCTTTATCAACCAGTTGCGTATGAAAATTGGGGTCATGATGCCGGGTCAAAGCCCTGAAACTACGACAGGGGGTA
ATGCGCTGAAGTTCTATGCTTCAGTGCGTTTGGATATTCGCCGTATTGGCGCGATCAAGAAGGGTGACGAAATTATCGGG
AATCAAACCAAAATCAAGGTTGTTAAAAACAAGTTGGCGCCTCCCTTCAAACAAGTCGTGACTGAGATTCTCTATGGTGA
AGGCATCAGTCGTGAAGGGGAATTGATTGAGATGGGCGTGGAGGCCAAGTTGGTTGAGAAAGCCGGCGCTTGGTATAGCT
ACGGTGGTGAGCGGATCGGGCAAGGAAAAGATAATGCGCGCGGCTATCTACGTGAAAACCCGCATCTTGCGGCCAAGCTT
GAGGCTGATTTGCGTGAGAAATTTGAGCCGACCGAGCTTTCTCGAGAAGAGGGCGATGAAGATACGCTCGAAGATACAAT
GTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

3D structure

• AlphaFold DB: Q9PH23

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	73.333	95.101	0.697
recA	Acinetobacter baylyi ADP1	72.866	94.524	0.689
recA	Acinetobacter baumannii D1279779	71.903	95.389	0.686
recA	Pseudomonas stutzeri DSM 10701	71.951	94.524	0.68
recA	Vibrio cholerae strain A1552	70.552	93.948	0.663
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.552	93.948	0.663
recA	Neisseria gonorrhoeae MS11	66.374	98.559	0.654
recA	Neisseria gonorrhoeae MS11	66.374	98.559	0.654
recA	Neisseria gonorrhoeae strain FA1090	66.374	98.559	0.654
recA	Glaesserella parasuis strain SC1401	68.421	93.084	0.637
recA	Helicobacter pylori strain NCTC11637	61.747	95.677	0.591
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.377	96.254	0.591
recA	Latilactobacillus sakei subsp. sakei 23K	59.475	98.847	0.588
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.438	92.219	0.585
recA	Helicobacter pylori 26695	61.145	95.677	0.585
recA	Bacillus subtilis subsp. subtilis str. 168	61.846	93.66	0.579
recA	Streptococcus pneumoniae R6	60.671	94.524	0.573
recA	Streptococcus pneumoniae Rx1	60.671	94.524	0.573
recA	Streptococcus pneumoniae D39	60.671	94.524	0.573
recA	Streptococcus pneumoniae TIGR4	60.671	94.524	0.573
recA	Streptococcus pyogenes NZ131	60	95.101	0.571
recA	Streptococcus mutans UA159	59.697	95.101	0.568
recA	Streptococcus mitis SK321	60.061	94.524	0.568
recA	Streptococcus mitis NCTC 12261	59.756	94.524	0.565
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.509	93.948	0.559
recA	Lactococcus lactis subsp. cremoris KW2	58.462	93.66	0.548