Detailed information NTG0132418

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OY18_RS00525
• Genome accession: NZ_CP009823
• Coordinates: 117818..118861 (+)
• Length: 347 a.a.
• NCBI ID: WP_046417698.1
• Uniprot ID: -
• Organism: Xylella fastidiosa strain J1a12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 112818..123861

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OY18_RS00510 (OY18_00480)	-	113447..114475 (-)	1029	WP_010892665.1	right-handed parallel beta-helix repeat-containing protein	-
OY18_RS00515 (OY18_00485)	-	115497..116528 (+)	1032	WP_010892667.1	nitronate monooxygenase family protein	-
OY18_RS00520 (OY18_00490)	lexA	117001..117636 (+)	636	WP_023906043.1	transcriptional repressor LexA	-
OY18_RS00525 (OY18_00495)	recA	117818..118861 (+)	1044	WP_046417698.1	recombinase RecA	Machinery gene
OY18_RS00530 (OY18_00500)	alaS	119360..122013 (+)	2654	Protein_86	alanine--tRNA ligase	-
OY18_RS00535 (OY18_00505)	csrA	122152..122367 (+)	216	WP_004085529.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37582.27 Da
• Isoelectric Point: 5.0879

>NTDB_id=132418 OY18_RS00525 WP_046417698.1 117818..118861(+) (recA) [Xylella fastidiosa strain J1a12]
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
QCQKKGGTAAFIDAEHALDPIYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSIDIMVIDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGVMMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIGQGKDNARGYLRENPHLAAKL
EADLREKFEPTELSREEGDEDTLEDTM

Nucleotide

• Length: 1044 bp

>NTDB_id=132418 OY18_RS00525 WP_046417698.1 117818..118861(+) (recA) [Xylella fastidiosa strain J1a12]
ATGGATGAGAACAAGAAACGCGCCCTTTCTGTCGCTTTAAGCCAGATTGAAAAACAGTTCGGCAAGGGGTCCGTGATGCG
GATGGGCGATCGCGTGATCGAGGCCGTAGAGGCGATCCCGACAGGTTCGCTCATGTTGGATCTGGCCCTGGGGATTGGTG
GTTTGCCAAAGGGACGTGTCGTGGAAATCTATGGGCCGGAATCTTCTGGGAAGACCACATTGACTTTGCAGGCGATCGCT
CAATGCCAGAAGAAGGGAGGTACAGCAGCGTTCATTGATGCTGAGCATGCCTTGGATCCGATTTATGCGGGCAAGTTAGG
CGTCAATGTTGATGATTTGTTGTTGTCTCAGCCAGATACTGGGGAGCAGGCTCTGGAAATCGCTGACATGCTGGTGCGCT
CGGGGTCGATCGATATCATGGTCATTGATTCGGTTGCGGCACTCACGCCAAAGGCGGAGATTGAGGGTGAGATGGGAGAT
CAGTTGCCCGGTCTTCAGGCGCGCTTGATGAGCCAGGCACTGCGTAAATTGACCGGCAATATCAAGCGCTCTAATACGCT
GGTGATCTTTATCAACCAGTTGCGTATGAAAATTGGGGTCATGATGCCGGGTCAAAGCCCTGAAACTACGACAGGGGGTA
ATGCGCTGAAGTTCTATGCTTCAGTGCGTTTGGATATTCGCCGTATTGGCGCGATCAAGAAGGGGGACGAAATTATCGGG
AATCAAACCAAAATCAAGGTTGTTAAAAACAAGTTGGCGCCTCCCTTCAAACAAGTCGTGACTGAGATTCTCTATGGTGA
AGGCATCAGTCGTGAAGGGGAATTGATTGAGATGGGCGTGGAGGCCAAGTTGGTTGAGAAAGCCGGCGCTTGGTATAGCT
ACGGTGGTGAGCGGATCGGGCAAGGAAAAGATAATGCGCGCGGCTATCTACGTGAAAACCCGCATCTTGCGGCCAAGCTT
GAGGCTGATTTGCGTGAGAAATTTGAGCCGACCGAGCTTTCTCGAGAAGAGGGCGATGAAGATACGCTCGAAGATACAAT
GTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	73.636	95.101	0.7
recA	Acinetobacter baylyi ADP1	73.171	94.524	0.692
recA	Acinetobacter baumannii D1279779	72.205	95.389	0.689
recA	Pseudomonas stutzeri DSM 10701	72.256	94.524	0.683
recA	Vibrio cholerae strain A1552	70.859	93.948	0.666
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.859	93.948	0.666
recA	Neisseria gonorrhoeae MS11	66.667	98.559	0.657
recA	Neisseria gonorrhoeae MS11	66.667	98.559	0.657
recA	Neisseria gonorrhoeae strain FA1090	66.667	98.559	0.657
recA	Glaesserella parasuis strain SC1401	68.731	93.084	0.64
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.677	96.254	0.594
recA	Helicobacter pylori strain NCTC11637	62.048	95.677	0.594
recA	Helicobacter pylori 26695	61.446	95.677	0.588
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.75	92.219	0.588
recA	Latilactobacillus sakei subsp. sakei 23K	59.184	98.847	0.585
recA	Bacillus subtilis subsp. subtilis str. 168	62.154	93.66	0.582
recA	Streptococcus pneumoniae D39	60.366	94.524	0.571
recA	Streptococcus pneumoniae Rx1	60.366	94.524	0.571
recA	Streptococcus pneumoniae R6	60.366	94.524	0.571
recA	Streptococcus pneumoniae TIGR4	60.366	94.524	0.571
recA	Streptococcus pyogenes NZ131	59.697	95.101	0.568
recA	Streptococcus mutans UA159	59.394	95.101	0.565
recA	Streptococcus mitis SK321	59.756	94.524	0.565
recA	Streptococcus mitis NCTC 12261	59.451	94.524	0.562
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.202	93.948	0.556
recA	Lactococcus lactis subsp. cremoris KW2	58.769	93.66	0.55