Detailed information NTG0132214

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GPICK_RS01415
• Genome accession: NZ_CP009788
• Coordinates: 314099..315118 (+)
• Length: 339 a.a.
• NCBI ID: WP_039739879.1
• Uniprot ID: A0A0B5BB77
• Organism: Geobacter pickeringii strain G13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 309099..320118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPICK_RS01400 (GPICK_01400)	-	310084..310533 (+)	450	WP_039739873.1	phosphatidylglycerophosphatase A	-
GPICK_RS01405 (GPICK_01405)	-	310530..311771 (+)	1242	WP_039739875.1	competence/damage-inducible protein A	-
GPICK_RS01410 (GPICK_01410)	-	311765..313966 (+)	2202	WP_084201312.1	ATP-binding protein	-
GPICK_RS01415 (GPICK_01415)	recA	314099..315118 (+)	1020	WP_039739879.1	recombinase RecA	Machinery gene
GPICK_RS01420 (GPICK_01420)	-	315122..316276 (+)	1155	WP_039739882.1	type IV pilus twitching motility protein PilT	-
GPICK_RS01425 (GPICK_01425)	-	316298..316744 (+)	447	WP_236685608.1	regulatory protein RecX	-
GPICK_RS01430 (GPICK_01430)	alaS	316776..319412 (+)	2637	WP_039739889.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 339 a.a.
• Molecular weight: 36396.98 Da
• Isoelectric Point: 6.3035

>NTDB_id=132214 GPICK_RS01415 WP_039739879.1 314099..315118(+) (recA) [Geobacter pickeringii strain G13]
MTQDREKAIELTLSQIEKQFGKGAIMRLGAEEALPDIAAIPTGSVSLDLALGVGGVPRGRVIEIYGPESSGKTTLALHIA
AEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEITEMLVRSGAVDVLVIDSVAALVPKAEIEGEMG
DSHVGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRKIATLKQGDAVVGS
RTRVKVVKNKVAPPFKEVEFDIYYGEGVSRLGDILDLAVDRKIIDKSGAWFSYGSERIGQGRENARTFLRERPELVAEIE
AKLYEAAGMARPGAKEAQA

Nucleotide

• Length: 1020 bp

>NTDB_id=132214 GPICK_RS01415 WP_039739879.1 314099..315118(+) (recA) [Geobacter pickeringii strain G13]
GTGACCCAGGACCGTGAGAAGGCCATCGAGCTGACGCTCAGCCAGATAGAAAAGCAGTTCGGCAAGGGGGCGATCATGCG
CCTCGGCGCCGAAGAGGCCCTCCCCGACATTGCCGCCATCCCCACCGGCTCGGTTTCCCTCGACCTCGCCCTCGGCGTCG
GAGGGGTCCCCCGCGGCCGGGTGATCGAGATCTACGGCCCCGAATCGTCGGGCAAGACGACCCTCGCCCTCCATATCGCC
GCCGAGGCCCAGAAGATGGGGGGGATCGCCGCCTTCGTGGATGCGGAGCACGCCCTGGACATCGGCTACGCCCGCAAGCT
CGGGGTCAAGACCGATGATCTCCTCGTCTCCCAGCCCGACACCGGCGAGCAGGCCCTGGAGATCACCGAGATGCTCGTGC
GCAGCGGCGCCGTTGACGTCCTCGTCATCGACTCGGTGGCGGCCCTGGTCCCCAAGGCGGAGATCGAGGGAGAGATGGGG
GATTCCCACGTCGGCCTCCAGGCGCGGCTCATGTCCCAGGCGCTGCGCAAGCTCACCGGCATCATCTCCAAGTCCAACTG
CTGCGTCATTTTCATCAACCAGATCCGGATGAAGATCGGCGTCATGTTCGGCAACCCCGAGACCACCACCGGCGGCAACG
CCCTCAAGTTCTACGCCTCGGTTCGCCTCGACATCCGCAAGATCGCCACCCTCAAGCAGGGGGACGCGGTGGTCGGCTCC
CGCACCCGGGTGAAGGTGGTGAAGAACAAGGTGGCGCCGCCGTTCAAGGAAGTGGAGTTCGACATCTACTACGGCGAGGG
GGTCTCCCGCCTCGGCGACATCCTCGACCTGGCGGTGGACCGCAAGATCATCGACAAGAGCGGCGCCTGGTTCTCCTACG
GCTCGGAGCGGATCGGCCAGGGGCGCGAGAACGCCCGGACCTTCCTCAGGGAGCGCCCGGAACTGGTGGCCGAGATCGAG
GCAAAACTCTACGAGGCGGCCGGCATGGCCCGCCCGGGGGCGAAGGAGGCCCAGGCCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A0B5BB77

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	71.787	94.1	0.676
recA	Pseudomonas stutzeri DSM 10701	68	95.87	0.652
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.061	97.345	0.643
recA	Glaesserella parasuis strain SC1401	67.29	94.69	0.637
recA	Neisseria gonorrhoeae strain FA1090	65.35	97.05	0.634
recA	Neisseria gonorrhoeae MS11	65.35	97.05	0.634
recA	Neisseria gonorrhoeae MS11	65.35	97.05	0.634
recA	Helicobacter pylori strain NCTC11637	65.046	97.05	0.631
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	65.846	95.87	0.631
recA	Acinetobacter baylyi ADP1	65.846	95.87	0.631
recA	Bacillus subtilis subsp. subtilis str. 168	64.848	97.345	0.631
recA	Helicobacter pylori 26695	64.742	97.05	0.628
recA	Acinetobacter baumannii D1279779	65.538	95.87	0.628
recA	Vibrio cholerae strain A1552	65.231	95.87	0.625
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.231	95.87	0.625
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.03	97.345	0.614
recA	Latilactobacillus sakei subsp. sakei 23K	62.385	96.46	0.602
recA	Streptococcus mitis SK321	62.346	95.575	0.596
recA	Streptococcus pneumoniae R6	61.212	97.345	0.596
recA	Streptococcus pneumoniae TIGR4	61.212	97.345	0.596
recA	Streptococcus pneumoniae Rx1	61.212	97.345	0.596
recA	Streptococcus pneumoniae D39	61.212	97.345	0.596
recA	Streptococcus mitis NCTC 12261	62.037	95.575	0.593
recA	Streptococcus pyogenes NZ131	61.728	95.575	0.59
recA	Streptococcus mutans UA159	60.802	95.575	0.581
recA	Lactococcus lactis subsp. cremoris KW2	59.394	97.345	0.578