Detailed information NTG0130766

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: IX92_RS01270
• Genome accession: NZ_CP009617
• Coordinates: 265964..267010 (+)
• Length: 348 a.a.
• NCBI ID: WP_031343405.1
• Uniprot ID: A0A097QPW4
• Organism: Vibrio coralliilyticus strain RE98
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 260964..272010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IX92_RS01255 (IX92_01255)	lptG	261508..262578 (+)	1071	WP_006963120.1	LPS export ABC transporter permease LptG	-
IX92_RS01260 (IX92_01260)	mutS	262631..265195 (-)	2565	WP_043006738.1	DNA mismatch repair protein MutS	-
IX92_RS01265 (IX92_01265)	pncC	265280..265783 (+)	504	WP_043006740.1	nicotinamide-nucleotide amidase	-
IX92_RS01270 (IX92_01270)	recA	265964..267010 (+)	1047	WP_031343405.1	recombinase RecA	Machinery gene
IX92_RS01275 (IX92_01275)	recX	267093..267557 (+)	465	WP_043006742.1	recombination regulator RecX	-
IX92_RS01280 (IX92_01280)	alaS	267699..270281 (+)	2583	WP_043006744.1	alanine--tRNA ligase	-
IX92_RS01285 (IX92_01285)	-	270476..271663 (+)	1188	WP_043006746.1	aspartate kinase	-
IX92_RS01290 (IX92_01290)	csrA	271756..271953 (+)	198	WP_006963114.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37454.91 Da
• Isoelectric Point: 4.8016

>NTDB_id=130766 IX92_RS01270 WP_031343405.1 265964..267010(+) (recA) [Vibrio coralliilyticus strain RE98]
MDDNKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKQAETQIMYGAGFNREGELIDLGVKNKLVEKAGAWYSYNGDKIGQGKANACKYLRENPAAAQQIDT
KLRELLLTPAEIQPDDAELGEMPEQEEL

Nucleotide

• Length: 1047 bp

>NTDB_id=130766 IX92_RS01270 WP_031343405.1 265964..267010(+) (recA) [Vibrio coralliilyticus strain RE98]
ATGGACGATAACAAACAGAAAGCGCTCGCCGCTGCGCTCGGTCAGATTGAAAAGCAATTCGGTAAAGGCTCTATTATGCG
TCTTGGTGATAACCGCGCTATGGATGTTGAAACCATCTCTACAGGCTCACTTTCTCTTGATATCGCATTGGGTGCTGGTG
GTCTGCCAATGGGTCGTATCGTTGAAGTTTATGGCCCAGAGTCATCAGGTAAGACGACACTAACTCTTGAGCTGATTGCT
GCTGCACAACGTGAAGGTAAAACATGTGCCTTTATTGATGCAGAACACGCTCTTGATCCTGTCTACGCTAAAAAGCTAGG
CGTAGATATTGATGCACTATTGGTTTCTCAGCCGGACACGGGTGAGCAAGCATTAGAAATTTGTGACGCTCTGGCGCGCT
CAGGTGCGATTGACGTCATGGTTGTCGACTCTGTGGCTGCATTGACACCGAAAGCGGAAATCGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAGGCGCGTATGCTTTCTCAAGCAATGCGTAAGCTGACAGGTAACCTGAAGCAGTCAAACTGTAT
GTGTATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTAACCCTGAAACGACCACAGGTGGTAATGCGC
TAAAATTCTACGCTTCTGTTCGTCTTGATATTCGCCGCACAGGCTCTATCAAGGAAGGCGACGAAGTGGTAGGTAACGAA
ACTCGCATTAAAGTGGTTAAGAACAAGATCGCGGCACCGTTCAAACAAGCGGAAACGCAAATCATGTACGGCGCAGGCTT
TAACCGTGAAGGTGAGTTGATTGACCTAGGCGTGAAGAATAAGCTGGTTGAAAAAGCGGGTGCTTGGTATAGCTACAATG
GCGATAAGATTGGCCAGGGTAAAGCAAATGCGTGTAAGTACCTGCGTGAAAATCCAGCGGCGGCTCAGCAAATCGATACG
AAACTGCGTGAGTTGTTGCTAACACCGGCAGAAATCCAGCCAGACGACGCTGAGCTAGGTGAAATGCCAGAGCAAGAAGA
GTTGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A097QPW4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	88.385	100	0.897
recA	Vibrio cholerae O1 biovar El Tor strain E7946	88.385	100	0.897
recA	Pseudomonas stutzeri DSM 10701	74.924	95.115	0.713
recA	Acinetobacter baumannii D1279779	72.141	97.989	0.707
recA	Acinetobacter baylyi ADP1	73.874	95.69	0.707
recA	Neisseria gonorrhoeae MS11	67.241	100	0.672
recA	Neisseria gonorrhoeae MS11	67.241	100	0.672
recA	Neisseria gonorrhoeae strain FA1090	67.241	100	0.672
recA	Glaesserella parasuis strain SC1401	66.193	100	0.67
recA	Ralstonia pseudosolanacearum GMI1000	71.111	90.517	0.644
recA	Helicobacter pylori 26695	60.756	98.851	0.601
recA	Helicobacter pylori strain NCTC11637	60.465	98.851	0.598
recA	Streptococcus pneumoniae TIGR4	58.857	100	0.592
recA	Streptococcus pneumoniae Rx1	58.857	100	0.592
recA	Streptococcus pneumoniae D39	58.857	100	0.592
recA	Streptococcus pneumoniae R6	58.857	100	0.592
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.95	91.667	0.586
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	92.241	0.583
recA	Streptococcus pyogenes NZ131	61.231	93.391	0.572
recA	Streptococcus mitis SK321	61.3	92.816	0.569
recA	Streptococcus mitis NCTC 12261	61.3	92.816	0.569
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.115	0.566
recA	Streptococcus mutans UA159	60.615	93.391	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.442	91.667	0.563
recA	Latilactobacillus sakei subsp. sakei 23K	60.125	92.241	0.555
recA	Lactococcus lactis subsp. cremoris KW2	59.752	92.816	0.555