Detailed information NTG0129367

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: LH20_RS06955
• Genome accession: NZ_CP009452
• Coordinates: 1456530..1457606 (+)
• Length: 358 a.a.
• NCBI ID: WP_053553582.1
• Uniprot ID: A0A0M3QD02
• Organism: Sphingopyxis sp. 113P3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1451530..1462606

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LH20_RS06940 (LH20_07120)	-	1451549..1453612 (+)	2064	WP_053553580.1	M13-type metalloendopeptidase	-
LH20_RS06945 (LH20_07125)	-	1453715..1456081 (+)	2367	WP_053556146.1	response regulator	-
LH20_RS06950 (LH20_07130)	-	1456071..1456424 (+)	354	WP_053553581.1	response regulator	-
LH20_RS06955 (LH20_07135)	recA	1456530..1457606 (+)	1077	WP_053553582.1	recombinase RecA	Machinery gene
LH20_RS06960 (LH20_07140)	-	1458034..1458660 (+)	627	WP_053553583.1	glutathione S-transferase family protein	-
LH20_RS06965 (LH20_07145)	-	1458650..1459249 (+)	600	WP_053553584.1	hypothetical protein	-
LH20_RS06970 (LH20_07150)	-	1459334..1460071 (+)	738	WP_053553585.1	hypothetical protein	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 38366.85 Da
• Isoelectric Point: 4.9628

>NTDB_id=129367 LH20_RS06955 WP_053553582.1 1456530..1457606(+) (recA) [Sphingopyxis sp. 113P3]
MAGQLSLVESGKSVNGTDRQKALDAALAQIDRAFGKGSVMKLGSKEAMQVEAISTGSLGLDIALGVGGLPRGRVIEIYGP
ESSGKTTLALHCIAEAQKTGGTAAFVDAEHALDPVYAKKLGVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVA
ALVPRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRR
TGQIKDRDEIVGNTTRVKVVKNKVAPPFKQVEFDIMYGQGISKIGEILDLGVKAGLVEKSGAWFSYDSIRIGQGRENAKN
FLTENPELMERLETAIRGRTDAVAEEMMAGPDDEGDDI

Nucleotide

• Length: 1077 bp

>NTDB_id=129367 LH20_RS06955 WP_053553582.1 1456530..1457606(+) (recA) [Sphingopyxis sp. 113P3]
ATGGCCGGACAATTGTCACTCGTCGAATCGGGGAAATCAGTGAACGGAACGGATAGGCAGAAGGCGCTCGACGCCGCATT
GGCGCAGATCGACCGCGCTTTCGGCAAAGGCTCGGTGATGAAGCTGGGCTCAAAGGAGGCGATGCAGGTCGAGGCGATCT
CCACCGGATCGCTCGGGCTCGACATCGCGCTGGGGGTCGGCGGCTTGCCGCGCGGCCGGGTCATCGAAATTTACGGTCCC
GAAAGCTCGGGCAAGACCACGCTGGCGCTGCACTGCATCGCTGAAGCCCAGAAGACGGGCGGCACCGCGGCCTTTGTCGA
TGCCGAACATGCGCTCGACCCCGTCTATGCGAAGAAGCTGGGCGTCGACATCGATGAACTGATCGTCTCGCAGCCCGACA
CCGGCGAGCAGGCGCTCGAGATCGTCGACACGCTCGTGCGCTCGAACGCGATCGACGTGCTCGTCGTCGACTCGGTCGCC
GCGCTGGTGCCGCGCGCCGAGATCGAGGGCGAGATGGGCGACAGCCATGTCGGGCTGCAGGCGCGTCTCATGTCGCAGAG
TCTGCGCAAGCTCACCGGTTCGATCAGCCGCTCGCGCTGCATGGTGATTTTCATCAACCAGCTGCGCATGAAGATCGGGG
TGATGTATGGCAATCCCGAGACGACGACGGGCGGCAATGCGCTCAAATTCTATGCCTCGGTTCGCCTCGACATTCGCCGT
ACCGGCCAGATCAAGGACCGCGACGAGATCGTCGGCAACACGACGCGCGTGAAGGTGGTCAAGAACAAGGTCGCGCCGCC
GTTCAAGCAGGTCGAATTCGATATCATGTACGGGCAGGGCATTTCGAAGATCGGCGAGATCCTCGACCTCGGCGTCAAGG
CCGGGCTGGTCGAGAAATCGGGCGCCTGGTTCAGCTATGATTCGATCCGGATCGGGCAGGGCCGGGAAAATGCGAAGAAT
TTCCTCACCGAGAATCCCGAACTGATGGAGCGGCTCGAAACCGCAATCCGCGGCCGTACCGATGCGGTGGCCGAGGAAAT
GATGGCGGGGCCCGACGACGAGGGCGACGATATCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-282)

3D structure

• AlphaFold DB: A0A0M3QD02

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	68.155	93.855	0.64
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.155	93.855	0.64
recA	Glaesserella parasuis strain SC1401	65.33	97.486	0.637
recA	Pseudomonas stutzeri DSM 10701	68.263	93.296	0.637
recA	Neisseria gonorrhoeae MS11	66.765	94.972	0.634
recA	Neisseria gonorrhoeae MS11	66.765	94.972	0.634
recA	Neisseria gonorrhoeae strain FA1090	66.765	94.972	0.634
recA	Acinetobacter baylyi ADP1	65.476	93.855	0.615
recA	Acinetobacter baumannii D1279779	68.438	89.385	0.612
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.743	95.531	0.609
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.861	92.458	0.609
recA	Ralstonia pseudosolanacearum GMI1000	70.779	86.034	0.609
recA	Bacillus subtilis subsp. subtilis str. 168	66.978	89.665	0.601
recA	Latilactobacillus sakei subsp. sakei 23K	62.353	94.972	0.592
recA	Helicobacter pylori strain NCTC11637	62.908	94.134	0.592
recA	Helicobacter pylori 26695	62.611	94.134	0.589
recA	Streptococcus pneumoniae Rx1	59.767	95.81	0.573
recA	Streptococcus pneumoniae D39	59.767	95.81	0.573
recA	Streptococcus pneumoniae R6	59.767	95.81	0.573
recA	Streptococcus pneumoniae TIGR4	59.767	95.81	0.573
recA	Streptococcus pyogenes NZ131	59.824	95.251	0.57
recA	Streptococcus mitis SK321	61.656	91.061	0.561
recA	Streptococcus mitis NCTC 12261	61.656	91.061	0.561
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.976	91.62	0.559
recA	Streptococcus mutans UA159	58.651	95.251	0.559
recA	Lactococcus lactis subsp. cremoris KW2	59.202	91.061	0.539