Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DR76_RS10050 | Genome accession | NZ_CP009072 |
| Coordinates | 2077404..2078465 (+) | Length | 353 a.a. |
| NCBI ID | WP_000963143.1 | Uniprot ID | A0AAV3H3S5 |
| Organism | Escherichia coli ATCC 25922 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2070393..2112233 | 2077404..2078465 | within | 0 |
Gene organization within MGE regions
Location: 2070393..2112233
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DR76_RS10005 (DR76_1919) | gutQ | 2070393..2071358 (-) | 966 | WP_001287404.1 | arabinose-5-phosphate isomerase GutQ | - |
| DR76_RS10010 (DR76_1921) | srlR | 2071351..2072124 (-) | 774 | WP_000804544.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| DR76_RS10015 (DR76_1922) | gutM | 2072191..2072550 (-) | 360 | WP_000252912.1 | transcriptional regulator GutM | - |
| DR76_RS10020 (DR76_1923) | srlD | 2072656..2073435 (-) | 780 | WP_001077354.1 | sorbitol-6-phosphate dehydrogenase | - |
| DR76_RS10025 (DR76_1924) | srlB | 2073439..2073810 (-) | 372 | WP_000216207.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| DR76_RS10030 (DR76_1925) | srlE | 2073821..2074780 (-) | 960 | WP_000196937.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| DR76_RS10035 (DR76_1926) | srlA | 2074777..2075340 (-) | 564 | WP_000573324.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| DR76_RS10040 (DR76_1927) | mltB | 2075597..2076682 (+) | 1086 | WP_001305264.1 | lytic murein transglycosylase B | - |
| DR76_RS10045 (DR76_1928) | pncC | 2076827..2077324 (+) | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| DR76_RS10050 (DR76_1929) | recA | 2077404..2078465 (+) | 1062 | WP_000963143.1 | recombinase RecA | Machinery gene |
| DR76_RS10055 (DR76_1930) | recX | 2078534..2079034 (+) | 501 | WP_000140506.1 | recombination regulator RecX | - |
| DR76_RS10065 (DR76_1931) | alaS | 2079163..2081793 (+) | 2631 | WP_000047170.1 | alanine--tRNA ligase | - |
| DR76_RS10070 (DR76_1933) | csrA | 2082028..2082213 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| DR76_RS10105 (DR76_1941) | yqaB | 2083540..2084106 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| DR76_RS10110 (DR76_1942) | yqaA | 2084103..2084531 (+) | 429 | WP_001287462.1 | YqaA family protein | - |
| DR76_RS10115 (DR76_1943) | gshA | 2084604..2086160 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| DR76_RS10120 (DR76_1944) | luxS | 2086310..2086825 (+) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | - |
| DR76_RS10125 (DR76_1945) | - | 2086874..2087986 (-) | 1113 | WP_000638135.1 | ATP-binding protein | - |
| DR76_RS10130 | - | 2087983..2088680 (-) | 698 | Protein_1922 | RNA ligase family protein | - |
| DR76_RS10135 (DR76_1948) | emrB | 2088938..2090476 (-) | 1539 | WP_001305258.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| DR76_RS10140 (DR76_1949) | emrA | 2090493..2091665 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| DR76_RS10145 (DR76_1950) | emrR | 2091792..2092322 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| DR76_RS10150 (DR76_1951) | ygaH | 2092413..2092748 (-) | 336 | WP_000119749.1 | L-valine transporter subunit YgaH | - |
| DR76_RS10155 (DR76_1952) | ygaZ | 2092738..2093475 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
| DR76_RS10160 (DR76_1953) | - | 2093599..2094783 (-) | 1185 | WP_000165691.1 | MFS transporter | - |
| DR76_RS10165 (DR76_1954) | proX | 2094975..2095967 (-) | 993 | WP_001216531.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| DR76_RS10170 (DR76_1955) | proW | 2096024..2097088 (-) | 1065 | WP_000774965.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| DR76_RS10175 (DR76_1956) | proV | 2097081..2098283 (-) | 1203 | WP_000985490.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| DR76_RS10180 (DR76_1957) | nrdF | 2098640..2099599 (-) | 960 | WP_000777928.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| DR76_RS10185 (DR76_1958) | nrdE | 2099609..2101753 (-) | 2145 | WP_000246575.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| DR76_RS10190 (DR76_1959) | nrdI | 2101726..2102136 (-) | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| DR76_RS10195 (DR76_1960) | nrdH | 2102133..2102378 (-) | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| DR76_RS10200 (DR76_1961) | - | 2102586..2103017 (-) | 432 | WP_000209797.1 | carboxymuconolactone decarboxylase family protein | - |
| DR76_RS10205 (DR76_1962) | - | 2103105..2104439 (+) | 1335 | WP_001138438.1 | PLP-dependent aminotransferase family protein | - |
| DR76_RS10210 (DR76_1963) | ygaM | 2104496..2104825 (-) | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| DR76_RS10215 (DR76_1964) | ygaC | 2104977..2105321 (+) | 345 | WP_000281320.1 | DUF2002 family protein | - |
| DR76_RS10220 (DR76_1965) | alaE | 2105358..2105807 (-) | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| DR76_RS10225 (DR76_1966) | stpA | 2106474..2106878 (+) | 405 | WP_000115381.1 | DNA-binding protein StpA | - |
| DR76_RS10230 (DR76_1967) | ygaP | 2106925..2107449 (-) | 525 | WP_001229462.1 | thiosulfate sulfurtransferase YgaP | - |
| DR76_RS10235 (DR76_1968) | ygaV | 2107459..2107758 (-) | 300 | WP_000137289.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| DR76_RS10240 (DR76_1969) | yqaE | 2107941..2108099 (+) | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| DR76_RS10245 (DR76_1970) | kbp | 2108183..2108632 (+) | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| DR76_RS10250 (DR76_1971) | csiR | 2108633..2109295 (-) | 663 | WP_000156817.1 | DNA-binding transcriptional regulator CsiR | - |
| DR76_RS10255 (DR76_1972) | gabP | 2109316..2110716 (-) | 1401 | WP_001305253.1 | GABA permease | - |
| DR76_RS10260 (DR76_1973) | gabT | 2110953..2112233 (-) | 1281 | WP_001305252.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
Sequence
Protein
Download Length: 353 a.a. Molecular weight: 37973.37 Da Isoelectric Point: 4.8171
>NTDB_id=126493 DR76_RS10050 WP_000963143.1 2077404..2078465(+) (recA) [Escherichia coli ATCC 25922]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF
Nucleotide
Download Length: 1062 bp
>NTDB_id=126493 DR76_RS10050 WP_000963143.1 2077404..2078465(+) (recA) [Escherichia coli ATCC 25922]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCAGAATCTTCCGGTAAAACCACGCTGACGTTGCAGGTG
ATCGCCGCAGCGCAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTCGATATTGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCACTGGAAATCTGTGATGCCCTGG
CACGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTTATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCGACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGGCGTAGC
AGAAACTAACGAAGATTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCAGAATCTTCCGGTAAAACCACGCTGACGTTGCAGGTG
ATCGCCGCAGCGCAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTCGATATTGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCACTGGAAATCTGTGATGCCCTGG
CACGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTTATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCGACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGGCGTAGC
AGAAACTAACGAAGATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.