Detailed information NTG0123318

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: UPTC16712_RS00800
• Genome accession: NZ_CP007778
• Coordinates: 139725..140759 (-)
• Length: 344 a.a.
• NCBI ID: WP_039640601.1
• Uniprot ID: A0A6M8MQH5
• Organism: Campylobacter lari RM16712
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 134725..145759

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC16712_RS00760 (UPTC16712_0151)	-	135055..135318 (-)	264	WP_039640585.1	DUF493 family protein	-
UPTC16712_RS00765 (UPTC16712_0152)	moaC	135296..135769 (-)	474	WP_039640587.1	cyclic pyranopterin monophosphate synthase MoaC	-
UPTC16712_RS00770 (UPTC16712_0153)	-	135857..136006 (+)	150	WP_039640590.1	highly acidic protein	-
UPTC16712_RS00775 (UPTC16712_0154)	-	136548..137024 (-)	477	WP_039640592.1	hypothetical protein	-
UPTC16712_RS00780 (UPTC16712_0155)	-	137132..137515 (+)	384	WP_039640594.1	group III truncated hemoglobin	-
UPTC16712_RS00785 (UPTC16712_0156)	-	137530..138213 (-)	684	WP_039640596.1	AMIN domain-containing protein	-
UPTC16712_RS00790 (UPTC16712_0157)	-	138203..138406 (-)	204	WP_052241300.1	hypothetical protein	-
UPTC16712_RS00795 (UPTC16712_0158)	eno	138481..139725 (-)	1245	WP_039640599.1	phosphopyruvate hydratase	-
UPTC16712_RS00800 (UPTC16712_0159)	recA	139725..140759 (-)	1035	WP_039640601.1	recombinase RecA	Machinery gene
UPTC16712_RS00805 (UPTC16712_0160)	-	140869..141732 (+)	864	WP_039640603.1	menaquinone biosynthesis family protein	-
UPTC16712_RS00810 (UPTC16712_0161)	fliQ	141759..142025 (+)	267	WP_012660903.1	flagellar biosynthesis protein FliQ	-
UPTC16712_RS00815 (UPTC16712_0162)	-	142022..142798 (+)	777	WP_039640605.1	UDP-N-acetylmuramate dehydrogenase	-
UPTC16712_RS00820 (UPTC16712_0163)	-	142791..143441 (-)	651	WP_039640607.1	hypothetical protein	-
UPTC16712_RS00825 (UPTC16712_0164)	-	143441..144199 (-)	759	WP_039640609.1	3'(2'),5'-bisphosphate nucleotidase	-
UPTC16712_RS00830 (UPTC16712_0165)	-	144239..145417 (-)	1179	WP_052241302.1	sodium/hydrogen exchanger family protein	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37215.63 Da
• Isoelectric Point: 5.3375

>NTDB_id=123318 UPTC16712_RS00800 WP_039640601.1 139725..140759(-) (recA) [Campylobacter lari RM16712]
MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEKIDSIPTGSVGLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIA
ECQKKGGVCAFIDAEHALDVRYAKNLGVDTENLYISQPDFGEQALEIVETIARSGAIDLIVVDSVAALTPKAEIEGDMGD
QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGMMGYGTPETTTGGNALKFYASVRLDVRKTATLKQNDEPIGN
RVKVKVAKNKVAPPFKQAEFDVMFGEGVSREGELIDYGVKLDIIDKSGAWFSYKASKLGQGRENAKAFLKENPTIADEIT
QAIQNSIGIDSMILGAKEDDEGEE

Nucleotide

• Length: 1035 bp

>NTDB_id=123318 UPTC16712_RS00800 WP_039640601.1 139725..140759(-) (recA) [Campylobacter lari RM16712]
ATGGATGATAATAAAAGAAAATCACTTGATGCAGCCTTAAAAAGTCTTGATAAAACCTTTGGAAAAGGTACTATCTTAAG
ACTTGGCGATAAAGAAGTTGAAAAAATTGATTCTATTCCTACAGGTTCAGTTGGGCTAGATTTAGCTCTAGGTATAGGCG
GAGTACCAAAAGGAAGAATTATAGAAATTTATGGACCTGAAAGTTCAGGCAAAACTACACTTACCTTACACATAATAGCA
GAATGTCAAAAAAAAGGTGGAGTTTGTGCATTTATAGATGCTGAGCACGCTCTTGATGTAAGATATGCAAAAAATTTAGG
TGTTGATACAGAAAATCTTTACATCTCTCAGCCAGATTTTGGAGAGCAAGCCTTAGAAATCGTTGAAACTATAGCAAGAA
GTGGGGCTATTGATCTAATAGTAGTAGATAGCGTTGCTGCACTAACTCCAAAAGCAGAAATTGAAGGTGATATGGGAGAT
CAGCATGTAGGTCTTCAAGCAAGACTAATGAGTCAAGCTTTAAGAAAATTAACTGGTATCGTTCATAAAATGAACACTAC
TGTAATTTTCATTAACCAAATTCGTATGAAAATAGGCATGATGGGCTATGGTACACCTGAAACTACTACTGGCGGAAATG
CATTAAAATTTTACGCTTCAGTGCGTTTAGATGTAAGAAAAACAGCCACTTTAAAACAAAATGATGAGCCTATTGGAAAC
CGTGTTAAAGTAAAAGTAGCCAAAAATAAAGTAGCTCCTCCTTTTAAACAAGCTGAATTTGATGTGATGTTTGGTGAGGG
TGTAAGCCGTGAGGGTGAGTTAATAGACTATGGTGTAAAACTTGATATTATTGATAAAAGCGGTGCGTGGTTTTCTTATA
AAGCTTCTAAACTTGGTCAAGGTAGAGAAAATGCTAAAGCCTTTTTAAAAGAAAATCCAACTATTGCAGATGAAATTACT
CAAGCTATACAAAACTCAATCGGTATAGATAGTATGATTTTGGGTGCAAAAGAAGATGATGAAGGAGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A6M8MQH5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.151	100	0.922
recA	Helicobacter pylori 26695	78.443	97.093	0.762
recA	Helicobacter pylori strain NCTC11637	78.144	97.093	0.759
recA	Neisseria gonorrhoeae MS11	64.638	100	0.648
recA	Neisseria gonorrhoeae MS11	64.638	100	0.648
recA	Neisseria gonorrhoeae strain FA1090	64.638	100	0.648
recA	Acinetobacter baylyi ADP1	62.5	100	0.625
recA	Glaesserella parasuis strain SC1401	62.682	99.709	0.625
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.157	96.512	0.619
recA	Acinetobacter baumannii D1279779	64.22	95.058	0.61
recA	Pseudomonas stutzeri DSM 10701	63.142	96.221	0.608
recA	Bacillus subtilis subsp. subtilis str. 168	63.415	95.349	0.605
recA	Ralstonia pseudosolanacearum GMI1000	64.038	92.151	0.59
recA	Vibrio cholerae strain A1552	62.654	94.186	0.59
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.654	94.186	0.59
recA	Streptococcus pyogenes NZ131	59.394	95.93	0.57
recA	Streptococcus mitis NCTC 12261	58.663	95.64	0.561
recA	Streptococcus pneumoniae Rx1	58.359	95.64	0.558
recA	Streptococcus pneumoniae D39	58.359	95.64	0.558
recA	Streptococcus pneumoniae R6	58.359	95.64	0.558
recA	Streptococcus pneumoniae TIGR4	58.359	95.64	0.558
recA	Streptococcus mitis SK321	58.055	95.64	0.555
recA	Streptococcus mutans UA159	57.704	96.221	0.555
recA	Latilactobacillus sakei subsp. sakei 23K	57.798	95.058	0.549
recA	Lactococcus lactis subsp. cremoris KW2	57.143	95.64	0.547
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.79	94.186	0.535