Detailed information NTG0123214

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CSUB8521_RS00800
• Genome accession: NZ_CP007772
• Coordinates: 138493..139527 (-)
• Length: 344 a.a.
• NCBI ID: WP_039662499.1
• Uniprot ID: -
• Organism: Campylobacter subantarcticus LMG 24374
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 133493..144527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSUB8521_RS00760 (CSUB8521_0155)	-	134330..134593 (-)	264	WP_039662483.1	DUF493 domain-containing protein	-
CSUB8521_RS00765 (CSUB8521_0156)	moaC	134571..135044 (-)	474	WP_039662486.1	cyclic pyranopterin monophosphate synthase MoaC	-
CSUB8521_RS00770 (CSUB8521_0157)	-	135132..135293 (+)	162	WP_039662487.1	highly acidic protein	-
CSUB8521_RS00775 (CSUB8521_0158)	-	135317..135793 (-)	477	WP_039662489.1	hypothetical protein	-
CSUB8521_RS00780 (CSUB8521_0159)	-	135902..136285 (+)	384	WP_039662491.1	group III truncated hemoglobin	-
CSUB8521_RS00785 (CSUB8521_0160)	-	136298..136981 (-)	684	WP_039662493.1	AMIN domain-containing protein	-
CSUB8521_RS00790 (CSUB8521_0161)	-	136971..137174 (-)	204	WP_052242957.1	hypothetical protein	-
CSUB8521_RS00795 (CSUB8521_0162)	eno	137249..138493 (-)	1245	WP_039662498.1	phosphopyruvate hydratase	-
CSUB8521_RS00800 (CSUB8521_0163)	recA	138493..139527 (-)	1035	WP_039662499.1	recombinase RecA	Machinery gene
CSUB8521_RS00805 (CSUB8521_0164)	-	139637..140500 (+)	864	WP_039662502.1	menaquinone biosynthesis family protein	-
CSUB8521_RS00810 (CSUB8521_0165)	fliQ	140527..140793 (+)	267	WP_012660903.1	flagellar biosynthesis protein FliQ	-
CSUB8521_RS00815 (CSUB8521_0166)	-	140790..141566 (+)	777	WP_039662504.1	UDP-N-acetylmuramate dehydrogenase	-
CSUB8521_RS00820 (CSUB8521_0167)	-	141559..142209 (-)	651	WP_039662507.1	hypothetical protein	-
CSUB8521_RS00825 (CSUB8521_0168)	-	142209..142967 (-)	759	WP_039662509.1	3'(2'),5'-bisphosphate nucleotidase CysQ	-
CSUB8521_RS00830 (CSUB8521_0169)	-	143007..144185 (-)	1179	WP_052242958.1	sodium/hydrogen exchanger family protein	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37199.63 Da
• Isoelectric Point: 5.3411

>NTDB_id=123214 CSUB8521_RS00800 WP_039662499.1 138493..139527(-) (recA) [Campylobacter subantarcticus LMG 24374]
MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEKIDSIPTGSVGLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIA
ECQKKGGVCAFIDAEHALDVRYAKNLGVDTENLYISQPDFGEQALEIVETIARSGAIDLIVVDSVAALTPKAEIEGDMGD
QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGMMGYGTPETTTGGNALKFYASVRLDVRKTATLKQNDEPIGN
RVKVKVAKNKVAPPFKQAEFDVMFGEGVSREGELIDYGVKLDIIDKSGAWFSYKASKLGQGRENAKAFLKENPAIADEIT
QAIQNSIGIDSMILGAKEDEEGEE

Nucleotide

• Length: 1035 bp

>NTDB_id=123214 CSUB8521_RS00800 WP_039662499.1 138493..139527(-) (recA) [Campylobacter subantarcticus LMG 24374]
ATGGATGATAATAAAAGAAAATCACTTGATGCAGCCTTAAAAAGTCTTGATAAAACCTTTGGAAAAGGTACTATCTTAAG
ACTTGGCGATAAAGAAGTTGAAAAAATTGATTCTATTCCTACAGGTTCAGTTGGGCTAGATTTAGCTCTAGGTATAGGTG
GGGTACCAAAGGGAAGAATTATAGAAATTTATGGACCTGAAAGCTCAGGGAAAACTACACTAACTTTACACATCATAGCA
GAATGCCAAAAAAAAGGCGGAGTTTGTGCATTTATAGATGCTGAACACGCGCTAGATGTAAGATATGCAAAAAATTTAGG
TGTTGATACAGAAAATCTCTACATCTCTCAGCCAGATTTTGGAGAACAAGCTTTAGAAATCGTTGAAACCATAGCAAGAA
GTGGAGCTATTGATCTAATAGTGGTAGATAGCGTTGCTGCACTAACTCCAAAAGCAGAAATCGAAGGTGATATGGGAGAT
CAACACGTAGGACTTCAAGCAAGATTAATGAGTCAAGCTTTAAGAAAACTCACTGGTATTGTACACAAAATGAACACCAC
TGTAATTTTCATCAACCAAATTCGTATGAAAATAGGTATGATGGGTTATGGCACACCTGAAACAACCACCGGTGGAAATG
CATTAAAATTTTATGCTTCGGTGCGTTTAGATGTAAGAAAAACAGCTACCTTAAAACAAAATGATGAGCCTATTGGAAAC
CGTGTTAAAGTAAAAGTAGCTAAAAACAAAGTCGCCCCACCTTTTAAACAAGCTGAATTTGATGTGATGTTTGGCGAGGG
TGTAAGTCGTGAAGGTGAGTTAATAGACTATGGTGTAAAACTTGACATCATTGATAAAAGTGGTGCATGGTTTTCTTACA
AAGCATCTAAACTTGGTCAAGGTAGAGAAAATGCTAAAGCCTTTTTAAAAGAAAACCCAGCTATTGCGGATGAAATCACG
CAAGCTATACAAAATTCCATCGGCATAGATAGTATGATTTTAGGTGCAAAAGAAGATGAGGAGGGAGAAGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	91.86	100	0.919
recA	Helicobacter pylori 26695	78.743	97.093	0.765
recA	Helicobacter pylori strain NCTC11637	78.443	97.093	0.762
recA	Neisseria gonorrhoeae MS11	65.103	99.128	0.645
recA	Neisseria gonorrhoeae MS11	65.103	99.128	0.645
recA	Neisseria gonorrhoeae strain FA1090	65.103	99.128	0.645
recA	Acinetobacter baylyi ADP1	62.791	100	0.628
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.157	96.512	0.619
recA	Glaesserella parasuis strain SC1401	64.923	94.477	0.613
recA	Acinetobacter baumannii D1279779	64.22	95.058	0.61
recA	Pseudomonas stutzeri DSM 10701	63.142	96.221	0.608
recA	Bacillus subtilis subsp. subtilis str. 168	63.415	95.349	0.605
recA	Ralstonia pseudosolanacearum GMI1000	64.038	92.151	0.59
recA	Vibrio cholerae strain A1552	62.654	94.186	0.59
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.654	94.186	0.59
recA	Streptococcus pyogenes NZ131	59.394	95.93	0.57
recA	Streptococcus mitis NCTC 12261	58.663	95.64	0.561
recA	Latilactobacillus sakei subsp. sakei 23K	56.433	99.419	0.561
recA	Streptococcus pneumoniae Rx1	58.359	95.64	0.558
recA	Streptococcus pneumoniae D39	58.359	95.64	0.558
recA	Streptococcus pneumoniae R6	58.359	95.64	0.558
recA	Streptococcus pneumoniae TIGR4	58.359	95.64	0.558
recA	Streptococcus mitis SK321	58.055	95.64	0.555
recA	Streptococcus mutans UA159	57.704	96.221	0.555
recA	Lactococcus lactis subsp. cremoris KW2	57.143	95.64	0.547
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.79	94.186	0.535