Detailed information NTG0122778

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DK53_RS05880
• Genome accession: NZ_CP007705
• Coordinates: 1211860..1212945 (-)
• Length: 361 a.a.
• NCBI ID: WP_002964332.1
• Uniprot ID: A0A1M4LB69
• Organism: Brucella abortus bv. 9 str. C68
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1206860..1217945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK53_RS05870 (DK53_1184)	phoA	1207213..1208658 (+)	1446	WP_002964329.1	alkaline phosphatase	-
DK53_RS05875 (DK53_1185)	alaS	1208810..1211467 (-)	2658	WP_002964330.1	alanine--tRNA ligase	-
DK53_RS05880 (DK53_1186)	recA	1211860..1212945 (-)	1086	WP_002964332.1	recombinase RecA	Machinery gene
DK53_RS05885 (DK53_1187)	-	1213276..1213938 (-)	663	WP_002964333.1	OmpA family protein	-
DK53_RS05890 (DK53_1188)	-	1214025..1214609 (-)	585	WP_002964334.1	transglycosylase SLT domain-containing protein	-
DK53_RS05895 (DK53_1189)	-	1214733..1216046 (-)	1314	WP_002964335.1	replication-associated recombination protein A	-
DK53_RS05900 (DK53_1190)	-	1216193..1217617 (-)	1425	WP_002964336.1	DegQ family serine endoprotease	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 38735.14 Da
• Isoelectric Point: 4.8780

>NTDB_id=122778 DK53_RS05880 WP_002964332.1 1211860..1212945(-) (recA) [Brucella abortus bv. 9 str. C68]
MSQNSLRLVEDNSVDKTKALDAALSQIERAFGKGSIMRLGQNDQVVEIETVSTGSLSLDIALGVGGLPKGRIVEIYGPES
SGKTTLALHTIAEAQKKGGICAFVDAEHALDPVYARKLGVDLENLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAAL
TPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
SIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGAGVSKVGELVDLGVKAGVVEKSGAWFSYNSQRLGQGRENAKQYL
KDNPEVAREIETTLRQNAGLIAEQFLDDGGPEEDAAGAAEM

Nucleotide

• Length: 1086 bp

>NTDB_id=122778 DK53_RS05880 WP_002964332.1 1211860..1212945(-) (recA) [Brucella abortus bv. 9 str. C68]
ATGTCTCAAAATTCATTGCGACTTGTTGAGGATAATTCAGTGGACAAGACAAAAGCTCTCGACGCGGCATTGTCGCAAAT
CGAACGGGCGTTCGGCAAAGGCTCAATCATGCGTCTGGGCCAGAACGATCAGGTGGTCGAAATCGAAACCGTATCGACCG
GCTCGCTCTCGCTCGATATTGCCTTGGGGGTTGGCGGCTTGCCCAAGGGACGTATCGTGGAAATCTATGGGCCGGAAAGT
TCCGGTAAAACCACGCTTGCCTTGCACACCATCGCTGAAGCGCAGAAGAAGGGCGGCATCTGCGCATTCGTCGATGCGGA
ACATGCGCTTGACCCGGTCTATGCGCGCAAGCTCGGTGTCGATCTTGAAAATCTTCTGATCTCGCAGCCCGATACGGGTG
AACAGGCGCTTGAAATCACCGATACGCTCGTGCGCTCTGGCGCCATCGACGTTCTCGTTGTCGACTCGGTCGCAGCCCTG
ACGCCGCGTGCTGAAATCGAAGGTGAAATGGGGGATTCCCTGCCGGGCCTTCAGGCCCGTCTCATGAGCCAGGCGCTGCG
CAAGCTTACTGGCTCCATTTCCCGTTCAAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGTGTCATGT
TCGGCTCGCCGGAAACGACAACGGGCGGCAATGCGCTCAAGTTCTATGCTTCGGTTCGCCTCGATATTCGCCGTATCGGC
TCCATCAAGGAGCGCGACGAAGTGGTGGGCAACCAGACCCGCGTGAAGGTGGTGAAGAACAAGCTCGCTCCTCCGTTCAA
GCAGGTCGAATTCGATATCATGTATGGCGCGGGCGTTTCCAAGGTGGGCGAGCTGGTCGATCTTGGTGTCAAGGCCGGTG
TGGTTGAGAAGTCTGGTGCCTGGTTCTCCTATAATTCCCAGCGTCTCGGGCAGGGGCGCGAGAACGCCAAGCAATATCTC
AAGGATAATCCGGAAGTCGCGCGTGAAATCGAAACCACGCTTCGCCAGAATGCCGGCCTGATCGCCGAGCAGTTCCTTGA
CGATGGCGGACCGGAAGAAGATGCTGCCGGCGCGGCGGAAATGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-280)

3D structure

• AlphaFold DB: A0A1M4LB69

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	71.045	92.798	0.659
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.045	92.798	0.659
recA	Acinetobacter baylyi ADP1	72.36	89.197	0.645
recA	Acinetobacter baumannii D1279779	72.05	89.197	0.643
recA	Neisseria gonorrhoeae strain FA1090	68.035	94.46	0.643
recA	Neisseria gonorrhoeae MS11	68.035	94.46	0.643
recA	Neisseria gonorrhoeae MS11	68.035	94.46	0.643
recA	Ralstonia pseudosolanacearum GMI1000	73.885	86.981	0.643
recA	Glaesserella parasuis strain SC1401	67.347	95.014	0.64
recA	Pseudomonas stutzeri DSM 10701	71.34	88.92	0.634
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.361	90.582	0.601
recA	Helicobacter pylori 26695	65.644	90.305	0.593
recA	Bacillus subtilis subsp. subtilis str. 168	65.337	90.305	0.59
recA	Helicobacter pylori strain NCTC11637	65.337	90.305	0.59
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.832	90.582	0.587
recA	Latilactobacillus sakei subsp. sakei 23K	62.883	90.305	0.568
recA	Streptococcus mitis SK321	61.027	91.69	0.56
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.813	88.643	0.557
recA	Streptococcus mitis NCTC 12261	60.725	91.69	0.557
recA	Streptococcus pneumoniae TIGR4	59.819	91.69	0.548
recA	Streptococcus pneumoniae Rx1	59.819	91.69	0.548
recA	Streptococcus pneumoniae D39	59.819	91.69	0.548
recA	Streptococcus pneumoniae R6	59.819	91.69	0.548
recA	Streptococcus mutans UA159	59.459	92.244	0.548
recA	Streptococcus pyogenes NZ131	59.878	91.136	0.546
recA	Lactococcus lactis subsp. cremoris KW2	59.215	91.69	0.543