Detailed information NTG0121126

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DK42_RS09670
• Genome accession: NZ_CP007571
• Coordinates: 1947646..1948785 (+)
• Length: 379 a.a.
• NCBI ID: WP_001085741.1
• Uniprot ID: A0AAV3JP53
• Organism: Streptococcus agalactiae strain GBS2-NM
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1942646..1953785

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK42_RS09650 (DK42_09795)	-	1943826..1945058 (+)	1233	WP_000657480.1	MFS transporter	-
DK42_RS09655 (DK42_09800)	ruvA	1945060..1945650 (+)	591	WP_000272490.1	Holliday junction branch migration protein RuvA	-
DK42_RS09660 (DK42_09805)	-	1945673..1946224 (+)	552	WP_000817342.1	DNA-3-methyladenine glycosylase I	-
DK42_RS09665 (DK42_09810)	cinA	1946313..1947572 (+)	1260	WP_001200981.1	competence/damage-inducible protein A	Machinery gene
DK42_RS09670 (DK42_09815)	recA	1947646..1948785 (+)	1140	WP_001085741.1	recombinase RecA	Machinery gene
DK42_RS09675 (DK42_09820)	spx	1949001..1949399 (+)	399	WP_000591161.1	transcriptional regulator Spx	-
DK42_RS09680 (DK42_09825)	-	1949601..1949867 (+)	267	WP_000507056.1	IreB family regulatory phosphoprotein	-
DK42_RS09685 (DK42_09830)	ruvX	1949867..1950286 (+)	420	WP_001222109.1	Holliday junction resolvase RuvX	-
DK42_RS09690 (DK42_09835)	-	1950312..1950629 (+)	318	WP_000940932.1	DUF1292 domain-containing protein	-
DK42_RS12060	-	1950711..1950833 (+)	123	WP_001285712.1	hypothetical protein	-
DK42_RS09700 (DK42_09845)	-	1950879..1952420 (+)	1542	WP_000230036.1	hypothetical protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40917.44 Da
• Isoelectric Point: 5.0474

>NTDB_id=121126 DK42_RS09670 WP_001085741.1 1947646..1948785(+) (recA) [Streptococcus agalactiae strain GBS2-NM]
MAKKTKKAEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIVEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGEHKDHNVGKETKIKVVKNKVAPPFREAFVEIMYGEGISRTGELIKIASDLDIIQKAGAWYSYNGEKIGQGSE
NAKKYLADNPAIFDEIDHKVRVHFGMTEDDSPVQSELVEEKNEADDLVLDLDNAIEIEE

Nucleotide

• Length: 1140 bp

>NTDB_id=121126 DK42_RS09670 WP_001085741.1 1947646..1948785(+) (recA) [Streptococcus agalactiae strain GBS2-NM]
TTGGCTAAAAAAACGAAAAAAGCAGAAGAAATTACTAAGAAATTCGGTGATGAACGTCGAAAAGCCTTAGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGCTTAGGTGAGCGAGCTGAACAAAAGGTTCAAGTAATGA
GTTCAGGTTCTCTTGCTTTAGATATCGCTTTAGGAGCAGGTGGATATCCTAAAGGACGTATCGTCGAAATTTATGGACCA
GAGTCATCTGGTAAAACAACGGTTGCCCTTCATGCCGTAGCTCAAGCCCAAAAGGAAGGTGGGATTGCTGCCTTTATTGA
TGCTGAGCACGCTCTTGACCCAGCCTATGCTGCGGCTCTTGGAGTTAATATTGATGAGTTACTCTTGTCTCAACCTGACT
CAGGTGAGCAAGGTCTTGAAATTGCAGGTAAATTGATTGATTCAGGCGCAGTTGATTTAGTTGTTGTCGATTCAGTTGCA
GCCCTTGTTCCTCGTGCTGAGATTGATGGTGATATTGGTGACAGCCACGTTGGTTTGCAAGCTCGTATGATGAGTCAAGC
AATGCGTAAATTGTCAGCATCCATTAACAAGACAAAGACAATCGCAATTTTTATCAACCAGCTAAGGGAAAAAGTAGGCG
TTATGTTTGGTAACCCTGAAACAACACCTGGTGGTCGTGCTTTGAAATTTTATTCATCGGTTCGTCTAGATGTTCGTGGT
AATACTCAAATCAAGGGAACTGGTGAGCATAAAGATCATAATGTTGGTAAAGAGACAAAAATCAAAGTTGTTAAAAATAA
AGTTGCTCCACCATTCCGTGAAGCTTTTGTCGAAATTATGTATGGTGAAGGTATTTCTCGCACGGGTGAGTTAATTAAAA
TTGCTAGTGATTTGGATATTATCCAAAAAGCAGGTGCATGGTACTCATATAATGGTGAGAAAATTGGACAAGGTTCTGAA
AATGCCAAAAAATATTTAGCAGATAATCCAGCAATTTTTGATGAAATTGACCATAAAGTGCGCGTGCACTTTGGAATGAC
TGAAGATGATTCGCCAGTTCAGTCTGAGCTCGTTGAAGAAAAAAATGAAGCTGATGATCTTGTTTTAGATTTGGACAATG
CTATTGAAATTGAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mutans UA159	89.034	100	0.9
recA	Streptococcus pyogenes NZ131	89.182	100	0.892
recA	Streptococcus mitis NCTC 12261	85.564	100	0.86
recA	Streptococcus mitis SK321	85.039	100	0.855
recA	Streptococcus pneumoniae Rx1	83.636	100	0.85
recA	Streptococcus pneumoniae D39	83.636	100	0.85
recA	Streptococcus pneumoniae R6	83.636	100	0.85
recA	Streptococcus pneumoniae TIGR4	83.636	100	0.85
recA	Lactococcus lactis subsp. cremoris KW2	76.724	91.821	0.704
recA	Latilactobacillus sakei subsp. sakei 23K	69.118	89.71	0.62
recA	Bacillus subtilis subsp. subtilis str. 168	68.997	86.807	0.599
recA	Acinetobacter baylyi ADP1	59.659	92.876	0.554
recA	Neisseria gonorrhoeae MS11	63.142	87.335	0.551
recA	Neisseria gonorrhoeae MS11	63.142	87.335	0.551
recA	Neisseria gonorrhoeae strain FA1090	63.142	87.335	0.551
recA	Vibrio cholerae strain A1552	59.429	92.348	0.549
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.429	92.348	0.549
recA	Acinetobacter baumannii D1279779	59.091	92.876	0.549
recA	Glaesserella parasuis strain SC1401	60.294	89.71	0.541
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.398	86.807	0.533
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.229	85.224	0.53
recA	Pseudomonas stutzeri DSM 10701	57.514	91.293	0.525
recA	Ralstonia pseudosolanacearum GMI1000	59.819	87.335	0.522
recA	Helicobacter pylori strain NCTC11637	56.812	91.029	0.517
recA	Helicobacter pylori 26695	56.812	91.029	0.517
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.478	89.974	0.517