Detailed information NTG1167930

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACLIIK_RS08540
• Genome accession: NZ_OZ176236
• Coordinates: 1820425..1821486 (+)
• Length: 353 a.a.
• NCBI ID: WP_056322539.1
• Uniprot ID: A0A2S0I4U9
• Organism: Achromobacter mucicolens isolate LjRoot1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1815425..1826486

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLIIK_RS08520	-	1815501..1815710 (+)	210	WP_056322527.1	hypothetical protein	-
ACLIIK_RS08525	-	1816116..1817777 (-)	1662	WP_410367375.1	MFS transporter	-
ACLIIK_RS08530	-	1817973..1819349 (-)	1377	WP_410367376.1	sensor histidine kinase N-terminal domain-containing protein	-
ACLIIK_RS08535	-	1819462..1820151 (-)	690	WP_410366979.1	response regulator	-
ACLIIK_RS08540	recA	1820425..1821486 (+)	1062	WP_056322539.1	recombinase RecA	Machinery gene
ACLIIK_RS08545	recX	1821610..1822338 (+)	729	WP_410366980.1	recombination regulator RecX	-
ACLIIK_RS08550	-	1822441..1823358 (-)	918	WP_056322542.1	LysR family transcriptional regulator	-
ACLIIK_RS08555	metE	1823544..1825841 (+)	2298	WP_410366981.1	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37875.26 Da
• Isoelectric Point: 5.3334

>NTDB_id=1167930 ACLIIK_RS08540 WP_056322539.1 1820425..1821486(+) (recA) [Achromobacter mucicolens isolate LjRoot1]
MDDKTTKAAASEKAKALAAALSQIEKQFGKGSIMRYGDNEVSHDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGK
TTLTLQVVAEMQKLGGTCAFVDAEHALDVQYASKLGVNLADLLISQPDTGEQALEITDALVRSGSVDLIVVDSVAALVPK
AEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIK
KGDEVVGNETRVKVVKNKVAPPFKQAEFDIMYGAGISREGEIIDLGVAANVVDKSGAWYSYNGNRIGQGKDNVREYLKEH
KDMAIEIENRVRENQGIVSRAAEFVPTAEDTAE

Nucleotide

• Length: 1062 bp

>NTDB_id=1167930 ACLIIK_RS08540 WP_056322539.1 1820425..1821486(+) (recA) [Achromobacter mucicolens isolate LjRoot1]
ATGGACGACAAAACCACCAAGGCCGCCGCTTCGGAAAAGGCCAAGGCGCTCGCCGCAGCGCTTTCGCAGATCGAAAAGCA
GTTCGGCAAGGGCTCGATCATGCGCTACGGCGACAACGAGGTCTCGCACGACATCCAGGTGGTTTCCACGGGTTCGCTCG
GTCTGGATATCGCGCTGGGCGTCGGCGGCTTGCCGCGCGGCCGTGTCGTCGAAATCTACGGTCCGGAATCGTCGGGCAAG
ACCACCCTCACGCTGCAAGTCGTCGCCGAAATGCAAAAGCTGGGCGGCACCTGCGCCTTCGTCGACGCGGAACACGCACT
GGATGTCCAATACGCGTCCAAGCTGGGCGTCAACCTGGCCGATCTGCTGATCTCGCAGCCGGACACGGGCGAGCAGGCGC
TGGAAATCACCGACGCGCTGGTGCGCTCGGGTTCGGTCGACCTGATCGTCGTCGACTCGGTGGCCGCGCTGGTGCCCAAG
GCCGAAATCGAAGGCGAAATGGGCGATTCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTGAC
CGCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGGATGAAGATCGGCGTCATGTTCGGCAACC
CCGAAACCACCACCGGCGGCAACGCGCTCAAGTTCTACGCGTCCGTGCGCCTGGATATCCGCCGCATCGGTTCCATCAAG
AAGGGCGACGAGGTCGTCGGCAACGAAACCCGCGTCAAGGTCGTCAAGAACAAGGTTGCGCCGCCGTTCAAGCAGGCCGA
GTTCGACATCATGTATGGCGCCGGCATCTCGCGCGAAGGCGAAATCATCGACCTGGGCGTGGCCGCCAACGTCGTCGACA
AGTCGGGCGCCTGGTACAGCTACAACGGCAACCGCATCGGTCAGGGCAAGGACAACGTGCGCGAATACCTGAAAGAGCAC
AAGGACATGGCCATCGAAATCGAAAACCGCGTCCGCGAAAACCAGGGCATCGTCAGCCGCGCCGCTGAATTCGTGCCCAC
GGCGGAAGACACCGCCGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (15-277)

3D structure

• AlphaFold DB: A0A2S0I4U9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	81.534	99.717	0.813
recA	Pseudomonas stutzeri DSM 10701	72.141	96.601	0.697
recA	Neisseria gonorrhoeae MS11	72.561	92.918	0.674
recA	Neisseria gonorrhoeae MS11	72.561	92.918	0.674
recA	Neisseria gonorrhoeae strain FA1090	72.561	92.918	0.674
recA	Acinetobacter baylyi ADP1	69.501	96.601	0.671
recA	Vibrio cholerae O1 biovar El Tor strain E7946	73.52	90.935	0.669
recA	Vibrio cholerae strain A1552	73.52	90.935	0.669
recA	Acinetobacter baumannii D1279779	72.897	90.935	0.663
recA	Glaesserella parasuis strain SC1401	71.651	90.935	0.652
recA	Latilactobacillus sakei subsp. sakei 23K	63.743	96.884	0.618
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.865	94.334	0.612
recA	Bacillus subtilis subsp. subtilis str. 168	65.138	92.635	0.603
recA	Helicobacter pylori 26695	61.383	98.3	0.603
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.337	92.351	0.603
recA	Helicobacter pylori strain NCTC11637	61.095	98.3	0.601
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.158	91.501	0.578
recA	Streptococcus pneumoniae TIGR4	59.706	96.317	0.575
recA	Streptococcus pneumoniae D39	59.706	96.317	0.575
recA	Streptococcus pneumoniae R6	59.706	96.317	0.575
recA	Streptococcus pneumoniae Rx1	59.706	96.317	0.575
recA	Streptococcus mitis NCTC 12261	59.118	96.317	0.569
recA	Streptococcus mitis SK321	59.118	96.317	0.569
recA	Lactococcus lactis subsp. cremoris KW2	59.118	96.317	0.569
recA	Streptococcus pyogenes NZ131	59.701	94.901	0.567
recA	Streptococcus mutans UA159	57.941	96.317	0.558