Detailed information NTG1166264

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AB3Y90_RS04665
• Genome accession: NZ_OZ061570
• Coordinates: 949989..951050 (+)
• Length: 353 a.a.
• NCBI ID: WP_003598111.1
• Uniprot ID: A0A243PT23
• Organism: Lacticaseibacillus paracasei isolate Lacticaseibacillus paracasei CIRM-BIA2373
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 944989..956050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3Y90_RS04645	-	945983..946711 (+)	729	WP_003569514.1	elongation factor P 5-aminopentanone reductase	-
AB3Y90_RS04650	-	946798..947727 (+)	930	WP_003569516.1	helix-turn-helix domain-containing protein	-
AB3Y90_RS04655	pgsA	947724..948317 (+)	594	WP_003564171.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AB3Y90_RS04660	cinA	948691..949932 (+)	1242	WP_003601723.1	competence/damage-inducible protein A	Machinery gene
AB3Y90_RS04665	recA	949989..951050 (+)	1062	WP_003598111.1	recombinase RecA	Machinery gene
AB3Y90_RS04670	rny	951345..952916 (+)	1572	WP_003657913.1	ribonuclease Y	-
AB3Y90_RS04675	-	953010..953660 (-)	651	WP_367292529.1	YigZ family protein	-
AB3Y90_RS04680	-	953688..954950 (+)	1263	WP_367293128.1	helicase-related protein	-
AB3Y90_RS04685	-	955163..955624 (+)	462	WP_003564183.1	ComF family protein	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37745.94 Da
• Isoelectric Point: 5.8234

>NTDB_id=1166264 AB3Y90_RS04665 WP_003598111.1 949989..951050(+) (recA) [Lacticaseibacillus paracasei isolate Lacticaseibacillus paracasei CIRM-BIA2373]
MAGDERQKALDVALKKIEKNFGKGAIMRMGAKADTRVSVVSSGSLAVDDALGVGGFPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDELLLSQPDTGEQGLEIADELVASGAIDIVVIDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGIIFGSPETTPGGRALKFYATVRLEIRRSEQIKTGADVVGN
RTKIKVVKNKVAPPFRTAIVDIMYGQGISQTGELVDMAVERDIVEKAGSWYAYQGERIGQGRENAKTYLDNHADLQQTIK
QQVRVAYGMAAAPGRETASVSEDQPEIHQQAEV

Nucleotide

• Length: 1062 bp

>NTDB_id=1166264 AB3Y90_RS04665 WP_003598111.1 949989..951050(+) (recA) [Lacticaseibacillus paracasei isolate Lacticaseibacillus paracasei CIRM-BIA2373]
ATGGCAGGAGACGAACGCCAGAAAGCATTGGATGTTGCACTGAAAAAGATTGAAAAAAATTTTGGTAAAGGCGCGATTAT
GCGAATGGGTGCTAAGGCGGACACGCGCGTTTCCGTTGTCTCTAGCGGCTCACTTGCCGTTGATGATGCACTTGGTGTTG
GGGGCTTTCCGCGCGGACGAATTGTCGAAATTTATGGACCGGAAAGTTCCGGCAAAACAACCGTCGCGCTGCATGCTGTT
GCTGAAGTGCAGAAGCAAGGCGGTACTGCCGCCTATATTGATGCCGAGAATGCGATGGATCCCAAGTACGCAACTGCTTT
GGGCGTCAATATTGACGAATTATTGCTCTCCCAGCCAGACACAGGCGAACAAGGGCTGGAGATTGCTGATGAACTAGTCG
CGTCTGGTGCCATTGATATTGTGGTGATTGATTCAGTTGCTGCTTTGGTGCCGCGGGCTGAGATTGAGGGCGATATGGGG
GATGCCCATGTTGGCTTGCAAGCCCGATTAATGTCACAGGCGTTACGTAAGTTATCCGGTTCCATCAATAAGACAAAAAC
GATTGCTTTATTCATTAATCAGATTCGTGAGAAAGTCGGGATCATTTTTGGGAGTCCGGAAACGACACCAGGTGGTCGTG
CCTTGAAGTTTTATGCGACTGTTCGGTTAGAGATCCGGCGGTCGGAACAGATCAAGACAGGCGCAGATGTCGTCGGCAAT
CGCACTAAAATCAAAGTGGTCAAGAATAAGGTGGCACCGCCTTTTCGAACAGCAATTGTGGATATCATGTATGGCCAAGG
CATTTCGCAAACTGGCGAACTTGTCGACATGGCCGTTGAGAGAGATATTGTTGAAAAAGCAGGGTCATGGTACGCGTATC
AAGGTGAACGCATCGGCCAAGGTCGCGAAAACGCTAAGACATATCTTGATAACCACGCTGATCTTCAGCAGACGATTAAA
CAACAGGTTCGCGTGGCTTATGGTATGGCAGCCGCACCTGGTCGGGAGACGGCTTCGGTCAGTGAAGATCAACCCGAAAT
ACATCAACAGGCTGAAGTATGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-269)

3D structure

• AlphaFold DB: A0A243PT23

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	78.963	98.3	0.776
recA	Bacillus subtilis subsp. subtilis str. 168	74.154	92.068	0.683
recA	Streptococcus mutans UA159	67.919	98.017	0.666
recA	Streptococcus mitis SK321	67.919	98.017	0.666
recA	Streptococcus mitis NCTC 12261	67.919	98.017	0.666
recA	Streptococcus pyogenes NZ131	70.606	93.484	0.66
recA	Streptococcus pneumoniae Rx1	69.486	93.768	0.652
recA	Streptococcus pneumoniae D39	69.486	93.768	0.652
recA	Streptococcus pneumoniae R6	69.486	93.768	0.652
recA	Streptococcus pneumoniae TIGR4	69.486	93.768	0.652
recA	Lactococcus lactis subsp. cremoris KW2	68.882	93.768	0.646
recA	Ralstonia pseudosolanacearum GMI1000	65.495	88.669	0.581
recA	Neisseria gonorrhoeae MS11	62.385	92.635	0.578
recA	Neisseria gonorrhoeae MS11	62.385	92.635	0.578
recA	Neisseria gonorrhoeae strain FA1090	62.385	92.635	0.578
recA	Acinetobacter baylyi ADP1	58.43	97.45	0.569
recA	Pseudomonas stutzeri DSM 10701	58.529	96.317	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.3	91.501	0.561
recA	Acinetobacter baumannii D1279779	61.059	90.935	0.555
recA	Glaesserella parasuis strain SC1401	54.83	99.717	0.547
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.021	92.635	0.547
recA	Helicobacter pylori 26695	58.182	93.484	0.544
recA	Helicobacter pylori strain NCTC11637	58.182	93.484	0.544
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.19	90.935	0.538
recA	Vibrio cholerae strain A1552	59.19	90.935	0.538
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.269	92.635	0.521