Detailed information NTG1162677

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABGT69_RS03025
• Genome accession: NZ_OZ006982
• Coordinates: 552416..553492 (-)
• Length: 358 a.a.
• NCBI ID: WP_191363770.1
• Uniprot ID: -
• Organism: MAG: Limosilactobacillus oris isolate metabat2_pooled_metaflye.974 MAG
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 547416..558492

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABGT69_RS03015	mutS	547771..550422 (-)	2652	WP_191363772.1	DNA mismatch repair protein MutS	-
ABGT69_RS03020	rny	550673..552226 (-)	1554	WP_191363771.1	ribonuclease Y	-
ABGT69_RS03025	recA	552416..553492 (-)	1077	WP_191363770.1	recombinase RecA	Machinery gene
ABGT69_RS03030	-	553583..554830 (-)	1248	WP_191363769.1	competence/damage-inducible protein A	-
ABGT69_RS03035	pgsA	555000..555584 (-)	585	WP_003714395.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ABGT69_RS03040	-	555603..556694 (-)	1092	WP_056984072.1	RodZ family helix-turn-helix domain-containing protein	-
ABGT69_RS03045	-	556781..558079 (-)	1299	WP_191363768.1	EF-P 5-aminopentanol modification-associated protein YfmH	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 38472.86 Da
• Isoelectric Point: 5.3440

>NTDB_id=1162677 ABGT69_RS03025 WP_191363770.1 552416..553492(-) (recA) [MAG: Limosilactobacillus oris isolate metabat2_pooled_metaflye.974 MAG]
MADQRKAALDKALQKIEKNFGKGSIMRMGDAADMKIATVSSGSLAIDKALGVGGYPRGRIVEIYGPESSGKTTVALHAVA
EVQRQGGTVAYIDAENALDPQYAEALGVDVDNLLLSQPDTGEEGLAIADALIATSAIDLVVIDSVAALVPQAEIDGDMGD
HHVGLQARLMSQALRKLSGEINKTKTIAIFINQIREKVGVMFGNPETTTGGRALKFYSTIRMEIRRAEQIKNGTDVIGNK
AKVKIVKNKVAPPFKRCEIDIMYGEGISKTGELLDMAVDQDLVKKSGAWYSYGNERIGQGRENAKQWLADHPDSMMELMN
KVRVANGMKPLEESKKAADDGDAPAAGQQETIEEASKN

Nucleotide

• Length: 1077 bp

>NTDB_id=1162677 ABGT69_RS03025 WP_191363770.1 552416..553492(-) (recA) [MAG: Limosilactobacillus oris isolate metabat2_pooled_metaflye.974 MAG]
TTGGCAGACCAGCGTAAAGCAGCTTTAGATAAAGCACTTCAAAAGATTGAAAAGAACTTTGGTAAGGGTTCGATCATGCG
CATGGGGGATGCTGCCGACATGAAGATTGCGACGGTTTCCAGCGGTTCGCTGGCAATCGACAAGGCACTTGGTGTTGGCG
GTTATCCACGGGGCCGGATAGTAGAAATCTACGGTCCTGAAAGTTCGGGGAAGACGACTGTCGCCCTCCATGCCGTGGCA
GAAGTTCAACGGCAAGGGGGCACGGTAGCGTACATCGATGCCGAAAACGCCTTAGACCCGCAGTATGCGGAAGCCCTTGG
GGTTGATGTCGACAACCTGCTCTTATCCCAGCCAGACACCGGTGAAGAGGGACTGGCGATTGCAGATGCCTTAATTGCCA
CCAGTGCAATTGACCTGGTCGTGATTGATTCCGTAGCCGCCCTGGTTCCCCAAGCCGAAATTGATGGTGACATGGGTGAC
CACCACGTCGGTTTGCAGGCGCGGTTGATGTCCCAAGCCTTGCGGAAACTTTCTGGTGAAATCAACAAGACGAAGACAAT
TGCGATTTTTATCAATCAAATCCGTGAAAAGGTCGGGGTTATGTTTGGAAATCCCGAAACGACTACTGGGGGCCGGGCCC
TTAAATTTTACTCCACCATCCGGATGGAAATCCGCCGGGCGGAACAGATTAAGAACGGAACCGACGTCATCGGTAATAAG
GCGAAGGTTAAAATCGTTAAGAATAAGGTAGCGCCTCCGTTCAAGCGGTGTGAAATTGATATCATGTATGGTGAAGGAAT
CTCGAAGACTGGTGAACTGTTGGATATGGCGGTAGACCAGGACCTGGTGAAGAAGAGCGGTGCATGGTACTCATACGGCA
ACGAACGAATTGGTCAGGGCCGGGAAAACGCCAAACAGTGGCTTGCTGATCACCCAGACAGCATGATGGAACTGATGAAT
AAGGTTCGGGTTGCTAATGGCATGAAGCCGCTGGAAGAGAGCAAGAAGGCCGCCGATGATGGTGACGCTCCGGCTGCTGG
TCAGCAGGAGACCATCGAAGAGGCCAGCAAGAACTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	76.737	92.458	0.709
recA	Bacillus subtilis subsp. subtilis str. 168	70.427	91.62	0.645
recA	Streptococcus mutans UA159	63.085	100	0.64
recA	Streptococcus mitis NCTC 12261	66.176	94.972	0.628
recA	Streptococcus mitis SK321	65.689	95.251	0.626
recA	Streptococcus pyogenes NZ131	66.767	92.458	0.617
recA	Streptococcus pneumoniae TIGR4	66.869	91.899	0.615
recA	Streptococcus pneumoniae D39	66.869	91.899	0.615
recA	Streptococcus pneumoniae Rx1	66.869	91.899	0.615
recA	Streptococcus pneumoniae R6	66.869	91.899	0.615
recA	Lactococcus lactis subsp. cremoris KW2	66.261	91.899	0.609
recA	Neisseria gonorrhoeae strain FA1090	58.96	96.648	0.57
recA	Neisseria gonorrhoeae MS11	58.96	96.648	0.57
recA	Neisseria gonorrhoeae MS11	58.96	96.648	0.57
recA	Ralstonia pseudosolanacearum GMI1000	62.658	88.268	0.553
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.633	91.341	0.545
recA	Glaesserella parasuis strain SC1401	56.765	94.972	0.539
recA	Vibrio cholerae O1 biovar El Tor strain E7946	55.814	96.089	0.536
recA	Vibrio cholerae strain A1552	55.814	96.089	0.536
recA	Helicobacter pylori 26695	56.305	95.251	0.536
recA	Helicobacter pylori strain NCTC11637	56.305	95.251	0.536
recA	Acinetobacter baylyi ADP1	58.514	90.223	0.528
recA	Pseudomonas stutzeri DSM 10701	58.204	90.223	0.525
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.538	90.782	0.522
recA	Acinetobacter baumannii D1279779	57.585	90.223	0.52
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.848	92.179	0.506