Detailed information NTG1158782

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: QOS47_RS02840
• Genome accession: NZ_OX460909
• Coordinates: 558516..559568 (+)
• Length: 350 a.a.
• NCBI ID: WP_045029286.1
• Uniprot ID: A0AAW4ZYC0
• Organism: Photobacterium phosphoreum strain MIP2473 isolate MIP2473
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 553516..564568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOS47_RS02825	rpoS	553887..554879 (+)	993	WP_107303968.1	RNA polymerase sigma factor RpoS	-
QOS47_RS02830	mutS	555100..557679 (-)	2580	WP_232574448.1	DNA mismatch repair protein MutS	-
QOS47_RS02835	pncC	557892..558389 (+)	498	WP_045029282.1	nicotinamide-nucleotide amidase	-
QOS47_RS02840	recA	558516..559568 (+)	1053	WP_045029286.1	recombinase RecA	Machinery gene
QOS47_RS02845	kch	559794..561023 (+)	1230	WP_045029288.1	voltage-gated potassium channel protein	-
QOS47_RS02850	alaS	561380..564001 (+)	2622	WP_045029290.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37480.02 Da
• Isoelectric Point: 5.1520

>NTDB_id=1158782 QOS47_RS02840 WP_045029286.1 558516..559568(+) (recA) [Photobacterium phosphoreum strain MIP2473 isolate MIP2473]
MDDNKQKALAAALGQIEKQFGKGSIMKLGDNKTMDIETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLEVIS
AAQKQGKTCAFIDAEHALDPIYAQKLGVDINELLVSQPDTGEQALEIVDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGQGFNRNGELIDLGVKNKLVEKAGAWYSYQGNKIGQGKANSCKYLVENPAIAAEIEK
KLRDLLLTPVVAETDAKDVAAIDAKDDDAF

Nucleotide

• Length: 1053 bp

>NTDB_id=1158782 QOS47_RS02840 WP_045029286.1 558516..559568(+) (recA) [Photobacterium phosphoreum strain MIP2473 isolate MIP2473]
ATGGACGACAACAAGCAGAAGGCTCTTGCCGCAGCGTTAGGCCAGATTGAGAAGCAGTTCGGTAAAGGTTCAATTATGAA
ATTGGGCGATAACAAAACAATGGATATCGAAACTATTTCGACAGGTTCATTGTCTCTTGATATCGCACTAGGTGCTGGTG
GCTTGCCAATGGGACGTATCGTAGAAATCTACGGTCCAGAATCCTCAGGTAAAACAACACTGACACTTGAAGTTATCTCA
GCTGCTCAAAAGCAAGGCAAAACCTGTGCATTTATTGATGCCGAGCATGCACTTGATCCAATTTATGCTCAGAAATTAGG
TGTTGATATTAATGAGCTACTTGTTTCTCAACCCGATACTGGCGAGCAGGCTTTAGAAATTGTTGACGCCCTAGCACGTT
CAGGTGCGGTGGATGTTATTGTAGTTGACTCCGTTGCAGCCCTAACACCAAAAGCTGAAATCGAAGGTGAAATGGGTGAC
TCTCATATGGGTCTGCAAGCACGTATGCTATCGCAAGCAATGCGTAAATTAACCGGTAACCTTAAACAGTCTAACTGTAT
GTGTATCTTCATTAACCAAATTCGTATGAAGATTGGTGTAATGTTTGGTAACCCAGAAACCACAACCGGTGGTAACGCAT
TGAAGTTCTATGCTTCTGTTCGTCTTGATATTCGTCGTACTGGCGCAATTAAAGATGGTGATGAAGTTGTTGGTAACGAA
ACCCGCATTAAAGTTGTTAAGAACAAGATTGCAGCACCCTTTAAGCAAGCAGAAACACAGATTTTATATGGCCAAGGTTT
TAACCGTAATGGTGAGTTGATTGACCTTGGTGTGAAGAACAAATTAGTTGAAAAAGCGGGTGCTTGGTATAGCTACCAAG
GTAATAAAATTGGTCAAGGTAAAGCAAACTCTTGCAAATACCTTGTTGAAAATCCAGCTATTGCCGCTGAGATTGAAAAG
AAATTACGTGACTTACTGTTAACGCCTGTCGTTGCTGAAACTGACGCTAAAGATGTTGCAGCAATTGATGCCAAAGATGA
CGATGCTTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	87.059	97.143	0.846
recA	Vibrio cholerae strain A1552	87.059	97.143	0.846
recA	Pseudomonas stutzeri DSM 10701	75	97.143	0.729
recA	Acinetobacter baylyi ADP1	73.669	96.571	0.711
recA	Acinetobacter baumannii D1279779	74.695	93.714	0.7
recA	Glaesserella parasuis strain SC1401	71.296	92.571	0.66
recA	Ralstonia pseudosolanacearum GMI1000	70.462	92.857	0.654
recA	Neisseria gonorrhoeae MS11	69.632	93.143	0.649
recA	Neisseria gonorrhoeae MS11	69.632	93.143	0.649
recA	Neisseria gonorrhoeae strain FA1090	69.632	93.143	0.649
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64	92.857	0.594
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.631	94.571	0.583
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	91.714	0.58
recA	Streptococcus mitis SK321	57.55	100	0.577
recA	Streptococcus mitis NCTC 12261	57.265	100	0.574
recA	Helicobacter pylori strain NCTC11637	61.231	92.857	0.569
recA	Helicobacter pylori 26695	60.923	92.857	0.566
recA	Streptococcus pneumoniae D39	61.3	92.286	0.566
recA	Streptococcus pneumoniae Rx1	61.3	92.286	0.566
recA	Streptococcus pneumoniae R6	61.3	92.286	0.566
recA	Streptococcus pneumoniae TIGR4	61.3	92.286	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.182	94	0.566
recA	Streptococcus pyogenes NZ131	60	92.857	0.557
recA	Streptococcus mutans UA159	60	92.857	0.557
recA	Latilactobacillus sakei subsp. sakei 23K	60.125	91.714	0.551
recA	Lactococcus lactis subsp. cremoris KW2	57.895	92.286	0.534