Detailed information NTG1155306

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OM978_RS04725
• Genome accession: NZ_OX352320
• Coordinates: 1002828..1003886 (+)
• Length: 352 a.a.
• NCBI ID: WP_233007960.1
• Uniprot ID: -
• Organism: Rheinheimera sp. MM224
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 997828..1008886

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OM978_RS04710 (JAMGFMIE_00947)	-	998851..999588 (+)	738	WP_264345747.1	hypothetical protein	-
OM978_RS04715 (JAMGFMIE_00948)	mutS	999652..1002237 (-)	2586	WP_264345748.1	DNA mismatch repair protein MutS	-
OM978_RS04720 (JAMGFMIE_00949)	-	1002270..1002761 (+)	492	WP_264345749.1	CinA family protein	-
OM978_RS04725 (JAMGFMIE_00950)	recA	1002828..1003886 (+)	1059	WP_233007960.1	recombinase RecA	Machinery gene
OM978_RS04730 (JAMGFMIE_00951)	metA	1004190..1005116 (+)	927	WP_264345750.1	homoserine O-acetyltransferase MetA	-
OM978_RS21450 (JAMGFMIE_00952)	-	1005113..1006177 (+)	1065	WP_319633894.1	homocysteine S-methyltransferase family protein	-
OM978_RS04735 (JAMGFMIE_00953)	metH	1006177..1008804 (+)	2628	WP_319633895.1	methionine synthase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37723.44 Da
• Isoelectric Point: 5.1534

>NTDB_id=1155306 OM978_RS04725 WP_233007960.1 1002828..1003886(+) (recA) [Rheinheimera sp. MM224]
MDDNKQKALTAALGQIERQFGKGSIMRLGDSTALDIDFIPTGSLGLDIALGIGGLPCGRIVEIYGPESSGKTTLTLQVVA
EAQRMGKTCAFIDAEHALDPVYAKKLGVNVDDLLVSQPDTGEQALEICDMLVRSAAVDVIVVDSVAALTPRAEIEGDMGD
SHVGLQARLMSQALRKLTGNIKRSNTLCIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGSVKDGDEVTGNE
TRVKVVKNKVAPPFKQAEFIIMYGAGISKDGELVDLGVLHKLIDKAGAWYAYKGNKIGQGKANAMKYLQENPAVAKEIEA
ELRRMLLLEPSKGAPSPAEDFGMVPEDAEADL

Nucleotide

• Length: 1059 bp

>NTDB_id=1155306 OM978_RS04725 WP_233007960.1 1002828..1003886(+) (recA) [Rheinheimera sp. MM224]
ATGGACGACAATAAACAAAAAGCACTGACCGCAGCCTTAGGTCAAATCGAACGCCAGTTTGGTAAAGGTTCAATTATGCG
TTTGGGCGACAGCACAGCGCTTGATATCGACTTTATCCCTACAGGTTCGTTAGGTTTGGATATTGCGCTCGGCATAGGCG
GTTTGCCTTGTGGTCGTATTGTTGAGATCTACGGTCCTGAATCTTCAGGTAAAACCACCTTAACTTTACAAGTTGTCGCT
GAAGCTCAGCGCATGGGTAAAACCTGTGCTTTTATCGATGCTGAGCACGCTTTAGACCCTGTATATGCGAAAAAGTTAGG
TGTAAATGTTGATGATTTATTAGTGTCTCAGCCGGATACAGGTGAACAGGCACTGGAAATCTGTGACATGTTAGTGCGTT
CTGCTGCGGTAGACGTCATTGTTGTCGACTCCGTAGCTGCATTAACACCTCGCGCTGAAATTGAAGGCGATATGGGTGAC
AGCCACGTAGGTTTACAGGCGCGTTTAATGTCTCAGGCGCTGCGTAAACTGACGGGTAATATCAAACGTTCAAACACCTT
ATGTATTTTCATCAACCAAATCCGGATGAAAATTGGTGTGATGTTTGGCTCACCAGAAACGACTACTGGCGGTAACGCGT
TAAAATTCTACGCTTCAGTCCGTTTAGATATTCGTCGTACTGGTTCTGTCAAAGATGGCGACGAAGTGACGGGTAACGAA
ACCCGCGTCAAAGTGGTGAAAAACAAAGTAGCACCGCCGTTTAAACAAGCCGAATTTATTATTATGTACGGCGCTGGTAT
CAGCAAAGATGGCGAGTTAGTGGACTTAGGTGTACTGCATAAGCTGATCGACAAAGCCGGTGCCTGGTACGCCTACAAAG
GTAACAAAATTGGTCAGGGTAAAGCCAACGCCATGAAGTACCTGCAGGAAAACCCTGCTGTTGCCAAAGAAATTGAAGCC
GAATTACGCCGTATGCTGTTACTGGAACCGTCGAAAGGTGCTCCGTCACCGGCAGAAGATTTTGGTATGGTGCCAGAAGA
CGCTGAAGCCGATCTGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	74.788	100	0.75
recA	Vibrio cholerae strain A1552	74.788	100	0.75
recA	Pseudomonas stutzeri DSM 10701	77.193	97.159	0.75
recA	Glaesserella parasuis strain SC1401	69.972	100	0.702
recA	Acinetobacter baylyi ADP1	73.716	94.034	0.693
recA	Acinetobacter baumannii D1279779	72.455	94.886	0.687
recA	Neisseria gonorrhoeae MS11	68.391	98.864	0.676
recA	Neisseria gonorrhoeae MS11	68.391	98.864	0.676
recA	Neisseria gonorrhoeae strain FA1090	68.391	98.864	0.676
recA	Ralstonia pseudosolanacearum GMI1000	71.385	92.33	0.659
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.103	96.875	0.631
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.444	94.034	0.597
recA	Helicobacter pylori 26695	64.198	92.045	0.591
recA	Bacillus subtilis subsp. subtilis str. 168	65	90.909	0.591
recA	Helicobacter pylori strain NCTC11637	63.889	92.045	0.588
recA	Streptococcus mitis SK321	60	98.011	0.588
recA	Latilactobacillus sakei subsp. sakei 23K	59.026	99.148	0.585
recA	Streptococcus pneumoniae D39	62.848	91.761	0.577
recA	Streptococcus pneumoniae Rx1	62.848	91.761	0.577
recA	Streptococcus pneumoniae R6	62.848	91.761	0.577
recA	Streptococcus pneumoniae TIGR4	62.848	91.761	0.577
recA	Streptococcus mitis NCTC 12261	62.539	91.761	0.574
recA	Streptococcus pyogenes NZ131	61.231	92.33	0.565
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.54	89.489	0.56
recA	Streptococcus mutans UA159	60.615	92.33	0.56
recA	Lactococcus lactis subsp. cremoris KW2	59.752	91.761	0.548