Detailed information NTG1148347

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: LSAF01_RS02610
• Genome accession: NZ_LT960777
• Coordinates: 522470..523537 (+)
• Length: 355 a.a.
• NCBI ID: WP_056948845.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain FLEC01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 517470..528537

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSAF01_RS02590 (LSAF01_0515)	yfmH	518637..519944 (+)	1308	WP_056948853.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
LSAF01_RS02595 (LSAF01_0516)	ymfI	519941..520672 (+)	732	WP_056948851.1	elongation factor P 5-aminopentanone reductase	-
LSAF01_RS02600 (LSAF01_0517)	-	520754..521677 (+)	924	WP_056948849.1	helix-turn-helix domain-containing protein	-
LSAF01_RS02605 (LSAF01_0518)	pgsA	521703..522287 (+)	585	WP_056948847.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LSAF01_RS02610 (LSAF01_0519)	recA	522470..523537 (+)	1068	WP_056948845.1	recombinase RecA	Machinery gene
LSAF01_RS02615 (LSAF01_0520)	rny	523924..525489 (+)	1566	WP_056948843.1	ribonuclease Y	-
LSAF01_RS02620 (LSAF01_0521)	-	525642..526730 (+)	1089	WP_056948881.1	glycosyltransferase family 4 protein	-
LSAF01_RS02625 (LSAF01_0522)	-	526756..527421 (-)	666	WP_056948841.1	YigZ family protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38209.21 Da
• Isoelectric Point: 4.6748

>NTDB_id=1148347 LSAF01_RS02610 WP_056948845.1 522470..523537(+) (recA) [Latilactobacillus sakei strain FLEC01]
MAKDERQAALDAALKKIEKNFGKGSIMRMGEKVDTQVSTVSSGSLALDEALGVGGYPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDILVVDSVAALVPRAEIEGEMG
DAHVGLQARLMSQALRKLSGTINKTKTIALFINQIREKVGVMFGNPEVTPGGRALKFYSTVRLEVRRAETIKNGTDMIGN
RARIKVVKNKVAPPFKVAEVDIMYGQGISRTGELVDMAVEKDIINKSGSWYSYGSERIGQGRENAKNYLADHEDVEDEVR
LKVRAAYGISDVPEEGLPTNEDEQINILPDDSTEE

Nucleotide

• Length: 1068 bp

>NTDB_id=1148347 LSAF01_RS02610 WP_056948845.1 522470..523537(+) (recA) [Latilactobacillus sakei strain FLEC01]
TTGGCTAAAGATGAAAGACAAGCAGCACTTGATGCTGCCCTAAAGAAGATTGAAAAGAATTTTGGTAAAGGTTCAATTAT
GCGCATGGGTGAAAAGGTTGATACACAAGTCTCAACAGTTTCATCTGGCTCATTGGCATTGGACGAAGCGCTCGGAGTAG
GTGGCTATCCTCGTGGCCGGATCGTTGAAATTTACGGCCCTGAAAGTTCAGGTAAAACAACTGTTGCATTACACGCTGTT
GCCGAAGTGCAAAAGCAAGGTGGCACGGCTGCTTATATCGATGCTGAAAATGCGATGGATCCTAAGTACGCAACAGCACT
TGGTGTTAATATCGATGACTTACTCTTGTCACAACCTGATACTGGGGAACAAGGCTTAGAAATCGCTGATGCCTTGGTAT
CAAGTGGGGCCGTTGATATTTTAGTAGTCGATTCAGTTGCTGCTTTGGTACCACGTGCTGAAATCGAAGGTGAAATGGGT
GACGCCCACGTTGGCTTACAAGCCCGTTTGATGTCACAAGCCTTACGTAAATTATCAGGAACAATTAATAAGACGAAGAC
GATTGCGTTATTCATTAACCAAATCCGTGAAAAAGTCGGCGTGATGTTTGGTAATCCCGAAGTCACACCAGGTGGGCGTG
CTTTGAAATTCTATTCAACTGTTCGGCTTGAAGTCCGGCGTGCTGAAACCATCAAGAATGGGACCGACATGATTGGGAAC
CGCGCCCGCATTAAAGTTGTTAAGAATAAGGTAGCACCACCATTTAAGGTCGCTGAAGTTGATATCATGTACGGTCAAGG
GATTTCCAGGACCGGTGAATTGGTTGATATGGCGGTTGAAAAAGACATTATCAATAAGAGTGGTTCTTGGTACTCTTATG
GCTCAGAACGAATTGGTCAAGGGCGTGAAAATGCTAAAAACTATTTGGCTGATCATGAAGATGTCGAAGATGAAGTTCGT
TTGAAGGTTAGAGCAGCTTATGGTATTTCAGATGTACCAGAAGAAGGTCTTCCCACAAATGAGGATGAACAAATAAATAT
TTTGCCAGATGATTCAACAGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	99.437	100	0.994
recA	Bacillus subtilis subsp. subtilis str. 168	74.924	92.113	0.69
recA	Streptococcus mutans UA159	68.208	97.465	0.665
recA	Streptococcus pyogenes NZ131	71.429	92.676	0.662
recA	Lactococcus lactis subsp. cremoris KW2	70.359	94.085	0.662
recA	Streptococcus mitis SK321	68.222	96.62	0.659
recA	Streptococcus pneumoniae D39	67.63	97.465	0.659
recA	Streptococcus pneumoniae R6	67.63	97.465	0.659
recA	Streptococcus pneumoniae TIGR4	67.63	97.465	0.659
recA	Streptococcus pneumoniae Rx1	67.63	97.465	0.659
recA	Streptococcus mitis NCTC 12261	69.486	93.239	0.648
recA	Neisseria gonorrhoeae strain FA1090	62.691	92.113	0.577
recA	Neisseria gonorrhoeae MS11	62.691	92.113	0.577
recA	Neisseria gonorrhoeae MS11	62.691	92.113	0.577
recA	Ralstonia pseudosolanacearum GMI1000	64.013	88.451	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.61	90.986	0.561
recA	Helicobacter pylori strain NCTC11637	54.902	100	0.552
recA	Helicobacter pylori 26695	54.902	100	0.552
recA	Vibrio cholerae strain A1552	60.748	90.423	0.549
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.748	90.423	0.549
recA	Pseudomonas stutzeri DSM 10701	57.227	95.493	0.546
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.327	92.113	0.546
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.021	92.113	0.544
recA	Acinetobacter baylyi ADP1	59.19	90.423	0.535
recA	Glaesserella parasuis strain SC1401	59.19	90.423	0.535
recA	Acinetobacter baumannii D1279779	58.567	90.423	0.53