Detailed information NTG1146274

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: B6E89_RS03535
• Genome accession: NZ_LT821323
• Coordinates: 779091..780155 (+)
• Length: 354 a.a.
• NCBI ID: WP_080124057.1
• Uniprot ID: -
• Organism: Chlamydia suis isolate SWA-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 774091..785155

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B6E89_RS03510	-	774708..775004 (-)	297	WP_080123917.1	YggT family protein	-
B6E89_RS03515	-	775109..776488 (+)	1380	WP_080133154.1	hypothetical protein	-
B6E89_RS03520	-	776489..777067 (+)	579	WP_080133155.1	hypothetical protein	-
B6E89_RS03525	-	777058..778335 (+)	1278	WP_080133156.1	toxin-antitoxin system YwqK family antitoxin	-
B6E89_RS03530	-	778338..778874 (+)	537	WP_080133157.1	5-formyltetrahydrofolate cyclo-ligase	-
B6E89_RS03535	recA	779091..780155 (+)	1065	WP_080124057.1	recombinase RecA	Machinery gene
B6E89_RS03540	-	780423..782249 (+)	1827	WP_080121624.1	DUF1347 family protein	-
B6E89_RS03545	recD	782250..783743 (+)	1494	WP_080121625.1	exodeoxyribonuclease V subunit alpha	-
B6E89_RS03550	-	783805..783984 (+)	180	WP_035407357.1	hypothetical protein	-
B6E89_RS03555	lptB	784087..784806 (-)	720	WP_080121626.1	LPS export ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38102.62 Da
• Isoelectric Point: 7.3267

>NTDB_id=1146274 B6E89_RS03535 WP_080124057.1 779091..780155(+) (recA) [Chlamydia suis isolate SWA-2]
MSVPDRKRALEAAIAYIEKQFGAGSIMSLGKHSSAHEISTIKTGALSLDLALGIGGVPKGRIIEIFGPESSGKTTLATHI
VANAQKMGGVAAYIDAEHALDPNYAALIGANINDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGEI
GDVHVGLQARMMSQALRKLTATLARTNTCAIFINQIREKIGVSFGNPETTTGGRALKFYSSIRMDIRRIGSIKGGDNFDI
GNRIKVKVAKNKLAPPFRTAEFDILFNEGISSAGCIIDLAVEKNIIDKKGSWFNYQDRKLGQGREAVREELKRNKELFQE
LERRIYESVQATSSQAVASACLEQESREVAEAAK

Nucleotide

• Length: 1065 bp

>NTDB_id=1146274 B6E89_RS03535 WP_080124057.1 779091..780155(+) (recA) [Chlamydia suis isolate SWA-2]
ATGAGCGTTCCCGACCGGAAACGGGCTTTGGAAGCTGCCATTGCCTATATTGAAAAGCAATTTGGCGCAGGATCTATTAT
GAGCTTAGGAAAACATTCTTCTGCTCATGAGATATCAACTATTAAAACAGGCGCATTGTCGTTGGATTTGGCCTTGGGAA
TAGGGGGTGTTCCTAAAGGCAGAATTATAGAGATTTTTGGGCCAGAGTCTTCTGGGAAAACGACTCTAGCAACGCATATA
GTGGCTAATGCTCAAAAAATGGGAGGCGTGGCTGCTTATATCGACGCTGAGCACGCTCTGGATCCCAATTATGCTGCGCT
AATTGGGGCAAATATTAATGATTTAATGATTTCTCAGCCGGACTGTGGTGAGGACGCTTTGAGTATTGCGGAGCTTTTAG
CGCGATCGGGAGCGGTAGATGTGATCGTAATCGATTCTGTGGCAGCATTGGTTCCTAAAAGTGAATTGGAAGGAGAAATT
GGAGACGTACATGTAGGGTTACAAGCTCGTATGATGTCTCAGGCTTTACGAAAACTCACTGCGACTTTGGCTCGGACGAA
CACTTGTGCTATTTTTATCAACCAAATTCGAGAAAAAATCGGAGTGAGCTTCGGGAACCCAGAGACCACAACAGGGGGAC
GCGCACTGAAATTTTACTCGTCAATTCGTATGGATATTCGTCGTATCGGTTCCATAAAAGGAGGCGATAACTTTGACATA
GGAAATCGAATTAAAGTGAAAGTTGCGAAAAATAAATTAGCGCCTCCTTTTAGAACCGCTGAATTCGATATTTTGTTCAA
TGAAGGAATTTCTTCTGCAGGATGTATTATTGATCTTGCTGTAGAGAAAAACATTATTGATAAGAAAGGCTCTTGGTTCA
ATTATCAAGATCGTAAATTAGGACAAGGCCGAGAGGCTGTTCGAGAGGAGCTTAAAAGGAATAAGGAGTTATTCCAAGAG
CTCGAGCGTCGTATTTATGAATCTGTGCAAGCGACCTCGTCACAAGCTGTAGCATCTGCTTGTTTAGAGCAAGAATCCCG
AGAAGTAGCAGAAGCCGCAAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	56.41	99.153	0.559
recA	Bacillus subtilis subsp. subtilis str. 168	60.991	91.243	0.556
recA	Ralstonia pseudosolanacearum GMI1000	60.494	91.525	0.554
recA	Helicobacter pylori 26695	59.509	92.09	0.548
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.61	93.503	0.548
recA	Pseudomonas stutzeri DSM 10701	56.932	95.763	0.545
recA	Helicobacter pylori strain NCTC11637	59.202	92.09	0.545
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.202	92.09	0.545
recA	Neisseria gonorrhoeae strain FA1090	59.502	90.678	0.54
recA	Neisseria gonorrhoeae MS11	59.502	90.678	0.54
recA	Neisseria gonorrhoeae MS11	59.502	90.678	0.54
recA	Lactococcus lactis subsp. cremoris KW2	58.589	92.09	0.54
recA	Acinetobacter baylyi ADP1	54.598	98.305	0.537
recA	Streptococcus mutans UA159	53.541	99.718	0.534
recA	Acinetobacter baumannii D1279779	54.839	96.328	0.528
recA	Streptococcus mitis SK321	57.716	91.525	0.528
recA	Streptococcus mitis NCTC 12261	57.716	91.525	0.528
recA	Latilactobacillus sakei subsp. sakei 23K	57.538	91.808	0.528
recA	Streptococcus pyogenes NZ131	57.407	91.525	0.525
recA	Vibrio cholerae O1 biovar El Tor strain E7946	57.276	91.243	0.523
recA	Vibrio cholerae strain A1552	57.276	91.243	0.523
recA	Streptococcus pneumoniae D39	57.099	91.525	0.523
recA	Streptococcus pneumoniae R6	57.099	91.525	0.523
recA	Streptococcus pneumoniae TIGR4	57.099	91.525	0.523
recA	Streptococcus pneumoniae Rx1	57.099	91.525	0.523
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	54.74	92.373	0.506