Detailed information NTG1145232

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DXE37_RS14150
• Genome accession: NZ_LT606951
• Coordinates: 49053..49346 (-)
• Length: 97 a.a.
• NCBI ID: WP_197713206.1
• Uniprot ID: -
• Organism: Polynucleobacter necessarius isolate PPGSP6
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 44053..54346

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXE37_RS00255	-	45079..46007 (+)	929	Protein_42	FAD-dependent oxidoreductase	-
DXE37_RS00260	-	46067..48736 (-)	2670	WP_114636172.1	DNA topoisomerase III	-
DXE37_RS14150	dprA	49053..49346 (-)	294	WP_197713206.1	DNA-processing protein DprA	Machinery gene
DXE37_RS14155	-	49369..49632 (-)	264	WP_197713022.1	DNA-processing protein DprA	-
DXE37_RS00270	def	49704..50219 (+)	516	WP_114636173.1	peptide deformylase	-
DXE37_RS00275	fmt	50229..51227 (+)	999	WP_114636174.1	methionyl-tRNA formyltransferase	-
DXE37_RS00280	htpX	51230..52093 (+)	864	WP_114636175.1	zinc metalloprotease HtpX	-
DXE37_RS11855	-	52098..52298 (+)	201	WP_231970830.1	hypothetical protein	-
DXE37_RS11860	-	52335..52493 (+)	159	WP_231970831.1	hypothetical protein	-
DXE37_RS11865	-	52499..52831 (+)	333	WP_231970832.1	hypothetical protein	-
DXE37_RS14160	-	52886..53332 (+)	447	Protein_52	hypothetical protein	-
DXE37_RS00290	-	53410..53991 (+)	582	WP_114636176.1	DUF4390 domain-containing protein	-

Sequence

Protein

• Length: 97 a.a.
• Molecular weight: 10480.14 Da
• Isoelectric Point: 6.4573

>NTDB_id=1145232 DXE37_RS14150 WP_197713206.1 49053..49346(-) (dprA) [Polynucleobacter necessarius isolate PPGSP6]
MELGPNHFIAAILGMGTDIVYPKQNFGLSQAISRQGLLISEFPLGVGPQPWHFPRRNRIIAALSLGVVVEAAEKSGSLIT
ARLAADLERDVFALPDQ

Nucleotide

• Length: 294 bp

>NTDB_id=1145232 DXE37_RS14150 WP_197713206.1 49053..49346(-) (dprA) [Polynucleobacter necessarius isolate PPGSP6]
ATAGAGCTTGGCCCCAATCACTTTATTGCTGCAATCCTAGGTATGGGAACTGACATCGTTTACCCCAAGCAAAATTTTGG
TCTTTCTCAAGCCATTTCTAGACAGGGTTTATTAATCTCTGAATTTCCCTTGGGTGTTGGTCCCCAGCCCTGGCATTTTC
CTAGGCGAAATCGCATCATAGCGGCGCTTTCACTTGGGGTGGTGGTAGAGGCAGCGGAAAAATCTGGCTCCCTCATTACA
GCACGCCTAGCCGCAGACCTCGAAAGGGACGTTTTCGCGCTACCGGACCAATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-96)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae strain A1552	62.791	88.66	0.557
dprA	Vibrio campbellii strain DS40M4	59.302	88.66	0.526
dprA	Acinetobacter baylyi ADP1	53.261	94.845	0.505
dprA	Legionella pneumophila strain ERS1305867	55.814	88.66	0.495
dprA	Neisseria meningitidis strain C311	55.814	88.66	0.495
dprA	Neisseria meningitidis MC58	55.814	88.66	0.495
dprA	Glaesserella parasuis strain SC1401	50.538	95.876	0.485
dprA	Haemophilus influenzae Rd KW20	54.023	89.691	0.485
dprA	Acinetobacter baumannii D1279779	54.023	89.691	0.485
dprA	Acinetobacter baumannii strain A118	54.023	89.691	0.485
dprA	Neisseria gonorrhoeae MS11	54.651	88.66	0.485
dprA	Neisseria gonorrhoeae strain FA1090	54.651	88.66	0.485
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	51.724	89.691	0.464
dprA	Thermus thermophilus HB27	50.575	89.691	0.454
dprA/cilB/dalA	Streptococcus mitis SK321	51.163	88.66	0.454
dprA	Streptococcus mutans UA159	50	88.66	0.443
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	50	88.66	0.443
dprA/cilB/dalA	Streptococcus pneumoniae D39	50	88.66	0.443
dprA/cilB/dalA	Streptococcus pneumoniae R6	50	88.66	0.443
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	50	88.66	0.443
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	50	88.66	0.443
dprA	Lactococcus lactis subsp. cremoris KW2	50	88.66	0.443
dprA	Bacillus subtilis subsp. subtilis str. 168	48.235	87.629	0.423
dprA	Latilactobacillus sakei subsp. sakei 23K	47.059	87.629	0.412
dprA	Staphylococcus aureus MW2	44.186	88.66	0.392
dprA	Staphylococcus aureus N315	44.186	88.66	0.392
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	41.379	89.691	0.371