Detailed information NTG1145218

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: BQ1619_RS08215
• Genome accession: NZ_LT606950
• Coordinates: 1484119..1484652 (+)
• Length: 177 a.a.
• NCBI ID: WP_197711921.1
• Uniprot ID: -
• Organism: Polynucleobacter necessarius isolate PPGSP4
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1479119..1489652

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BQ1619_RS08195	-	1480477..1481013 (-)	537	WP_231968607.1	DUF4390 domain-containing protein	-
BQ1619_RS10100	-	1481094..1481854 (-)	761	Protein_1724	hypothetical protein	-
BQ1619_RS10105	-	1482001..1482369 (-)	369	WP_231968608.1	hypothetical protein	-
BQ1619_RS08205	fmt	1482391..1483389 (-)	999	WP_114663390.1	methionyl-tRNA formyltransferase	-
BQ1619_RS08210	def	1483396..1483911 (-)	516	WP_114663392.1	peptide deformylase	-
BQ1619_RS08215	dprA	1484119..1484652 (+)	534	WP_197711921.1	DNA-processing protein DprA	Machinery gene
BQ1619_RS08755	-	1484654..1484950 (-)	297	WP_231968609.1	hypothetical protein	-
BQ1619_RS08220	-	1484883..1487546 (+)	2664	WP_415066215.1	DNA topoisomerase III	-
BQ1619_RS10775	-	1487606..1487890 (-)	285	Protein_1731	FAD-dependent oxidoreductase	-
BQ1619_RS08760	-	1488022..1488225 (-)	204	WP_162784633.1	hypothetical protein	-
BQ1619_RS08230	-	1488261..1488596 (-)	336	WP_114663397.1	FAD-dependent oxidoreductase	-

Sequence

Protein

• Length: 177 a.a.
• Molecular weight: 18530.59 Da
• Isoelectric Point: 8.7731

>NTDB_id=1145218 BQ1619_RS08215 WP_197711921.1 1484119..1484652(+) (dprA) [Polynucleobacter necessarius isolate PPGSP4]
MIAIVGSRRASIHGLRSAHLFARFLARAGAVVVSGLARGIDGAAYAGALAIGPRTVAVCGTGLDITYLKERLALARAINR
NGLLVSEFAPGVGPQAFHFPKRNRIIAALVSGVVVIEAAQKSGSLITARFAADLGREVFALPGPIDEPLHAGCHELIQQG
ATLVCEPNEMLEDLNFL

Nucleotide

• Length: 534 bp

>NTDB_id=1145218 BQ1619_RS08215 WP_197711921.1 1484119..1484652(+) (dprA) [Polynucleobacter necessarius isolate PPGSP4]
ATGATTGCTATTGTTGGCTCTCGCAGGGCAAGTATTCATGGACTAAGAAGCGCCCATCTCTTTGCGCGCTTCTTGGCTCG
GGCGGGTGCTGTTGTTGTTTCTGGACTAGCAAGAGGTATTGATGGTGCCGCCTATGCGGGAGCGCTGGCTATCGGACCTC
GGACTGTAGCAGTTTGTGGGACGGGGCTAGACATTACCTATCTCAAGGAGCGCTTGGCCCTAGCCAGAGCAATCAACAGA
AATGGATTGCTAGTTTCAGAGTTTGCCCCAGGAGTTGGCCCGCAAGCCTTTCATTTCCCCAAACGCAACCGCATCATTGC
GGCCCTAGTATCAGGGGTTGTTGTGATTGAAGCCGCCCAAAAATCTGGGTCTTTAATCACCGCCAGGTTTGCGGCTGATC
TCGGGAGAGAGGTATTTGCGTTGCCGGGGCCCATTGATGAGCCTCTTCATGCTGGTTGCCACGAACTCATTCAGCAGGGG
GCCACACTAGTTTGTGAGCCCAACGAAATGCTGGAGGACTTGAATTTTCTGTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (2-165)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae strain A1552	54.598	98.305	0.537
dprA	Legionella pneumophila strain ERS1305867	52	98.87	0.514
dprA	Acinetobacter baumannii D1279779	52	98.87	0.514
dprA	Vibrio campbellii strain DS40M4	51.412	100	0.514
dprA	Acinetobacter baumannii strain A118	51.429	98.87	0.508
dprA	Neisseria meningitidis MC58	52.326	97.175	0.508
dprA	Neisseria meningitidis strain C311	52.326	97.175	0.508
dprA	Acinetobacter baylyi ADP1	50.857	98.87	0.503
dprA	Neisseria gonorrhoeae strain FA1090	51.744	97.175	0.503
dprA	Neisseria gonorrhoeae MS11	51.163	97.175	0.497
dprA	Thermus thermophilus HB27	48.864	99.435	0.486
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	48.571	98.87	0.48
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	48.571	98.87	0.48
dprA/cilB/dalA	Streptococcus pneumoniae D39	48.571	98.87	0.48
dprA/cilB/dalA	Streptococcus pneumoniae R6	48.571	98.87	0.48
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	48.571	98.87	0.48
dprA/cilB/dalA	Streptococcus mitis SK321	48.571	98.87	0.48
dprA	Glaesserella parasuis strain SC1401	48.555	97.74	0.475
dprA	Haemophilus influenzae Rd KW20	48	98.87	0.475
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	45.856	100	0.469
dprA	Streptococcus mutans UA159	46.286	98.87	0.458
dprA	Lactococcus lactis subsp. cremoris KW2	44.767	97.175	0.435
dprA	Bacillus subtilis subsp. subtilis str. 168	42.197	97.74	0.412
dprA	Latilactobacillus sakei subsp. sakei 23K	38.636	99.435	0.384
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	37.853	100	0.379
dprA	Staphylococcus aureus MW2	37.209	97.175	0.362
dprA	Staphylococcus aureus N315	37.209	97.175	0.362