Detailed information NTG1145034

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BQ1177_RS01125
• Genome accession: NZ_LT604074
• Coordinates: 231864..233009 (-)
• Length: 381 a.a.
• NCBI ID: WP_003700567.1
• Uniprot ID: F5VCR9
• Organism: Ligilactobacillus salivarius isolate LPM01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 226864..238009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BQ1177_RS01115	mutS	227327..229957 (-)	2631	WP_087118346.1	DNA mismatch repair protein MutS	-
BQ1177_RS01120	rny	230124..231689 (-)	1566	WP_003700566.1	ribonuclease Y	-
BQ1177_RS01125	recA	231864..233009 (-)	1146	WP_003700567.1	recombinase RecA	Machinery gene
BQ1177_RS01130	pgsA	233202..233789 (-)	588	WP_003706586.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BQ1177_RS01135	-	233841..234767 (-)	927	WP_087118347.1	helix-turn-helix domain-containing protein	-
BQ1177_RS01140	ymfI	234849..235574 (-)	726	WP_003706582.1	elongation factor P 5-aminopentanone reductase	-
BQ1177_RS01145	yfmH	235580..236881 (-)	1302	WP_087118348.1	EF-P 5-aminopentanol modification-associated protein YfmH	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 41021.30 Da
• Isoelectric Point: 4.7333

>NTDB_id=1145034 BQ1177_RS01125 WP_003700567.1 231864..233009(-) (recA) [Ligilactobacillus salivarius isolate LPM01]
MANDKNKVQGDQPEERLKALDAALKKIEKKFGKGSIMKMGGKVDTKISTISSGSIAIDAGLGVGGYPRGRIIEIYGPESS
GKTTVALHAVAEVQKRGGTAAYIDAENALDPAYATALGVNIDELLLSQPDTGEQGLEIADALVSSGAIDIIVVDSVAALV
PKAEIEGEMGDSHVGLQARLMSQALRKLSGTINKTKTVAIFINQIREKVGVMFGNPETTPGGRALKFYSTVRMEVRRSEA
IKAKSEIIGNRTKIKFVKNKVAPPFKVAEVDIMYGEGISKTGELLDMAVEKDIIHKSGSWFSYGDTRIGQGRENAKEYLS
EHEDEMNEINIKVREAYGIPDENGNVPESQDKNTTQSAMDDKAADIDDSEEVSLDVNDSDE

Nucleotide

• Length: 1146 bp

>NTDB_id=1145034 BQ1177_RS01125 WP_003700567.1 231864..233009(-) (recA) [Ligilactobacillus salivarius isolate LPM01]
GTGGCTAATGACAAAAATAAAGTTCAAGGCGATCAACCTGAAGAAAGATTAAAAGCTTTAGATGCAGCTTTAAAAAAGAT
TGAGAAAAAGTTCGGTAAGGGTTCCATTATGAAAATGGGAGGAAAGGTAGATACAAAGATCTCTACTATTTCTAGTGGCT
CAATTGCTATTGATGCAGGATTAGGTGTAGGTGGTTATCCACGAGGACGTATTATTGAAATTTATGGTCCAGAAAGTTCT
GGTAAGACAACAGTTGCATTACATGCAGTTGCTGAAGTTCAAAAACGTGGTGGTACAGCAGCATATATCGATGCTGAAAA
TGCTTTGGATCCTGCATATGCTACTGCATTGGGAGTAAACATTGATGAATTACTACTTTCACAACCAGACACTGGTGAAC
AAGGCTTAGAAATTGCTGATGCTTTGGTTTCATCTGGTGCAATTGATATAATTGTTGTTGACTCAGTAGCCGCTTTAGTA
CCTAAAGCTGAAATTGAAGGTGAAATGGGTGATTCTCATGTTGGGTTGCAAGCTCGTTTGATGTCACAGGCTTTGAGAAA
ACTTTCAGGTACAATCAATAAGACGAAGACGGTAGCTATATTTATTAACCAAATTCGTGAAAAAGTAGGGGTTATGTTTG
GAAATCCCGAAACAACTCCTGGTGGTCGTGCTTTGAAGTTCTATTCAACTGTTAGAATGGAAGTGCGTCGTTCCGAAGCA
ATTAAGGCAAAATCTGAAATTATTGGTAATAGAACTAAGATTAAATTTGTGAAAAATAAGGTTGCTCCACCATTCAAAGT
AGCTGAAGTTGATATTATGTATGGTGAAGGTATTTCTAAAACTGGTGAATTACTGGATATGGCTGTTGAAAAGGATATCA
TTCACAAGAGTGGTTCTTGGTTCTCTTATGGAGATACAAGAATAGGTCAAGGACGTGAAAATGCTAAGGAATATCTTAGT
GAACATGAAGACGAGATGAATGAAATTAATATCAAAGTCAGAGAAGCATACGGTATACCGGATGAAAATGGAAATGTACC
TGAATCTCAAGATAAGAATACTACTCAATCTGCTATGGATGACAAGGCTGCAGATATAGATGATTCTGAAGAAGTATCTT
TAGATGTAAATGATAGTGACGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-279)

3D structure

• AlphaFold DB: F5VCR9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	81.633	90.026	0.735
recA	Bacillus subtilis subsp. subtilis str. 168	75	87.139	0.654
recA	Streptococcus pneumoniae Rx1	65.768	97.375	0.64
recA	Streptococcus pneumoniae D39	65.768	97.375	0.64
recA	Streptococcus pneumoniae R6	65.768	97.375	0.64
recA	Streptococcus pneumoniae TIGR4	65.768	97.375	0.64
recA	Streptococcus mitis NCTC 12261	65.591	97.638	0.64
recA	Streptococcus mitis SK321	65.323	97.638	0.638
recA	Lactococcus lactis subsp. cremoris KW2	70.571	87.402	0.617
recA	Streptococcus mutans UA159	63.934	96.063	0.614
recA	Streptococcus pyogenes NZ131	70.213	86.352	0.606
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.024	86.089	0.551
recA	Vibrio cholerae strain A1552	58.046	91.339	0.53
recA	Vibrio cholerae O1 biovar El Tor strain E7946	58.046	91.339	0.53
recA	Neisseria gonorrhoeae strain FA1090	63.175	82.677	0.522
recA	Neisseria gonorrhoeae MS11	63.175	82.677	0.522
recA	Neisseria gonorrhoeae MS11	63.175	82.677	0.522
recA	Ralstonia pseudosolanacearum GMI1000	63.578	82.152	0.522
recA	Glaesserella parasuis strain SC1401	61.3	84.777	0.52
recA	Helicobacter pylori strain NCTC11637	58.631	88.189	0.517
recA	Acinetobacter baumannii D1279779	59.159	87.402	0.517
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.939	85.827	0.514
recA	Helicobacter pylori 26695	58.333	88.189	0.514
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.185	85.039	0.512
recA	Acinetobacter baylyi ADP1	60.377	83.465	0.504
recA	Pseudomonas stutzeri DSM 10701	58.879	84.252	0.496