Detailed information NTG1143544

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: G3W54_RS07190
• Genome accession: NZ_LS999833
• Coordinates: 1400491..1401582 (-)
• Length: 363 a.a.
• NCBI ID: WP_162652407.1
• Uniprot ID: -
• Organism: Lentilitoribacter sp. Alg239-R112
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1395491..1406582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3W54_RS07180	-	1396368..1397579 (+)	1212	WP_162652405.1	NADP-dependent isocitrate dehydrogenase	-
G3W54_RS07185	alaS	1397663..1400311 (-)	2649	WP_162652406.1	alanine--tRNA ligase	-
G3W54_RS07190	recA	1400491..1401582 (-)	1092	WP_162652407.1	recombinase RecA	Machinery gene
G3W54_RS07195	-	1401815..1402735 (+)	921	WP_162652408.1	carbohydrate kinase family protein	-
G3W54_RS07200	-	1402770..1403672 (+)	903	WP_162652409.1	pseudouridine-5'-phosphate glycosidase	-
G3W54_RS07205	-	1403719..1404369 (-)	651	WP_162652410.1	OmpA family protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 38715.01 Da
• Isoelectric Point: 4.8059

>NTDB_id=1143544 G3W54_RS07190 WP_162652407.1 1400491..1401582(-) (recA) [Lentilitoribacter sp. Alg239-R112]
MGQNSLRLVEEKSVDKSKALDAALSQIERSYGKGSIMKLGSNESVVEIEKVSTGSLGLDIALGIGGLPKGRVIEIYGPES
SGKTTMALQTIAQAQKDGGICGFIDAEHALDPVYARKLGVDLEDLLISQPDTGEQALEITDTLVRSGALDVLVVDSVAAL
TPRAEIEGEMGDSLPGLQARLMSQALRKLTGSISKSNTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
AVKDRDEIVGNQTRVKVVKNKMAPPFKQVEFDIMYGAGSSKTGELVDLGVKAGIVEKSGSWFSYNSQRLGQGRENAKQFL
ADHPETADEIELSLRQNAGLIAEQLLDDPSGGASDDKDDAAKA

Nucleotide

• Length: 1092 bp

>NTDB_id=1143544 G3W54_RS07190 WP_162652407.1 1400491..1401582(-) (recA) [Lentilitoribacter sp. Alg239-R112]
ATGGGACAAAACTCTTTGCGACTTGTAGAGGAAAAATCAGTGGATAAAAGTAAGGCGCTGGATGCAGCACTTTCTCAGAT
TGAGCGATCATACGGAAAAGGCTCAATCATGAAACTCGGCTCAAATGAGAGTGTTGTCGAGATTGAAAAGGTTTCAACAG
GTTCTCTCGGGCTTGATATTGCCCTTGGTATTGGTGGTCTGCCTAAAGGCCGTGTTATTGAGATTTATGGTCCTGAGAGT
TCAGGTAAAACGACCATGGCATTGCAGACGATTGCTCAAGCTCAAAAAGATGGCGGTATCTGTGGTTTTATTGATGCAGA
GCATGCTCTTGATCCGGTTTATGCGCGTAAGCTTGGTGTTGATCTTGAAGACCTTTTGATATCACAGCCAGATACTGGTG
AGCAGGCATTAGAAATTACGGATACACTGGTTCGTTCTGGTGCGCTTGATGTTCTTGTTGTTGATTCTGTGGCAGCTCTT
ACGCCCCGAGCAGAGATTGAAGGTGAAATGGGCGATAGTCTCCCGGGCTTGCAAGCTCGTTTGATGAGCCAAGCCTTACG
CAAGTTGACAGGTTCGATTTCAAAATCAAATACCATGGTTATTTTTATCAACCAAATCCGTATGAAAATTGGTGTGATGT
TTGGTTCACCGGAAACAACAACAGGCGGCAATGCGCTTAAATTTTATGCATCAGTCCGTTTGGATATTCGCCGTATTGGT
GCTGTAAAGGACCGCGATGAAATTGTAGGTAACCAGACACGTGTTAAAGTTGTAAAGAATAAGATGGCACCTCCATTTAA
GCAGGTTGAATTTGATATTATGTATGGTGCAGGTTCTTCCAAAACGGGCGAATTGGTTGATTTAGGAGTCAAAGCTGGAA
TAGTCGAGAAATCTGGCTCCTGGTTCTCATATAATAGTCAACGCTTGGGACAGGGACGTGAAAACGCAAAGCAATTCCTT
GCTGATCACCCTGAAACTGCGGATGAGATTGAATTATCATTGCGTCAGAACGCCGGTCTGATTGCAGAGCAATTGCTTGA
TGACCCTTCTGGTGGTGCATCCGATGATAAGGATGATGCTGCAAAAGCTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-278)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baumannii D1279779	68.986	95.041	0.656
recA	Acinetobacter baylyi ADP1	69.643	92.562	0.645
recA	Glaesserella parasuis strain SC1401	66.181	94.49	0.625
recA	Neisseria gonorrhoeae MS11	66.374	94.215	0.625
recA	Neisseria gonorrhoeae strain FA1090	66.374	94.215	0.625
recA	Neisseria gonorrhoeae MS11	66.374	94.215	0.625
recA	Ralstonia pseudosolanacearum GMI1000	71.338	86.501	0.617
recA	Vibrio cholerae O1 biovar El Tor strain E7946	66.866	92.287	0.617
recA	Vibrio cholerae strain A1552	66.866	92.287	0.617
recA	Pseudomonas stutzeri DSM 10701	68.536	88.43	0.606
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.138	90.083	0.587
recA	Bacillus subtilis subsp. subtilis str. 168	65.337	89.807	0.587
recA	Helicobacter pylori strain NCTC11637	64.724	89.807	0.581
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.526	90.083	0.581
recA	Helicobacter pylori 26695	64.417	89.807	0.579
recA	Streptococcus mitis NCTC 12261	59.207	97.245	0.576
recA	Streptococcus mitis SK321	58.64	97.245	0.57
recA	Streptococcus pyogenes NZ131	58.689	96.694	0.567
recA	Latilactobacillus sakei subsp. sakei 23K	62.577	89.807	0.562
recA	Streptococcus pneumoniae Rx1	61.446	91.46	0.562
recA	Streptococcus pneumoniae R6	61.446	91.46	0.562
recA	Streptococcus pneumoniae TIGR4	61.446	91.46	0.562
recA	Streptococcus pneumoniae D39	61.446	91.46	0.562
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.038	87.328	0.559
recA	Streptococcus mutans UA159	57.67	96.97	0.559
recA	Lactococcus lactis subsp. cremoris KW2	58.507	92.287	0.54