Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   DQN71_RS10775 Genome accession   NZ_LS483471
Coordinates   2041844..2042992 (-) Length   382 a.a.
NCBI ID   WP_015605951.1    Uniprot ID   A0A3R9M7S0
Organism   Streptococcus cristatus strain NCTC13807     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2036844..2047992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN71_RS10730 (NCTC13807_02040) - 2037136..2038368 (-) 1233 WP_015605946.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  DQN71_RS10740 (NCTC13807_02041) - 2038743..2039054 (-) 312 WP_111694597.1 DUF1292 domain-containing protein -
  DQN71_RS10745 (NCTC13807_02042) ruvX 2039075..2039494 (-) 420 WP_015605947.1 Holliday junction resolvase RuvX -
  DQN71_RS10750 (NCTC13807_02043) - 2039494..2039760 (-) 267 WP_005592119.1 IreB family regulatory phosphoprotein -
  DQN71_RS10755 (NCTC13807_02044) - 2039928..2040485 (-) 558 WP_015605948.1 SP0191 family lipoprotein -
  DQN71_RS10760 (NCTC13807_02045) - 2040529..2041095 (-) 567 WP_015605949.1 SP0191 family lipoprotein -
  DQN71_RS10770 (NCTC13807_02046) spx 2041360..2041758 (-) 399 WP_015605950.1 transcriptional regulator Spx -
  DQN71_RS10775 (NCTC13807_02047) recA 2041844..2042992 (-) 1149 WP_015605951.1 recombinase RecA Machinery gene
  DQN71_RS10780 (NCTC13807_02048) cinA 2043051..2044307 (-) 1257 WP_015605952.1 competence/damage-inducible protein A Machinery gene
  DQN71_RS10790 (NCTC13807_02049) - 2044577..2044987 (+) 411 WP_041826926.1 helix-turn-helix domain-containing protein -
  DQN71_RS10795 (NCTC13807_02050) - 2045031..2045588 (-) 558 WP_015605954.1 GNAT family N-acetyltransferase -
  DQN71_RS10800 (NCTC13807_02051) - 2045660..2046319 (-) 660 WP_015605955.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  DQN71_RS10805 (NCTC13807_02052) - 2046324..2046878 (-) 555 WP_015605956.1 DNA-3-methyladenine glycosylase I -
  DQN71_RS10810 (NCTC13807_02053) ruvA 2046888..2047478 (-) 591 WP_015605957.1 Holliday junction branch migration protein RuvA -

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 41220.86 Da        Isoelectric Point: 4.8483

>NTDB_id=1142347 DQN71_RS10775 WP_015605951.1 2041844..2042992(-) (recA) [Streptococcus cristatus strain NCTC13807]
MAKKQKNLDEITKKFGDERQKALDNALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPSYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDAKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEVFDEIDRQVRVRYGLIEDDEAAETAKGKAEAPIEKLEEVTLDLDDAFDIEE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=1142347 DQN71_RS10775 WP_015605951.1 2041844..2042992(-) (recA) [Streptococcus cristatus strain NCTC13807]
ATGGCAAAAAAACAGAAAAATTTGGATGAAATTACAAAGAAATTTGGAGATGAACGCCAAAAAGCTTTGGACAATGCCTT
AAAAAACATTGAAAAAGACTTCGGTAAGGGAGCCATTATGCGTCTGGGTGAGCGAGCTGAGCAAAAAGTTCAAGTCATGA
GTTCAGGCTCTCTGGCTTTGGATATCGCTCTCGGTGCGGGTGGCTATCCTAAGGGACGGATTATTGAGATTTACGGTCCA
GAGTCTTCTGGTAAGACAACCGTTGCCCTTCACGCGGTGGCTCAAGCGCAAAAAGAAGGTGGAATTGCAGCCTTTATCGA
TGCTGAGCACGCTTTGGATCCGTCATACGCTGCAGCTCTGGGTGTAAACATTGATGAATTGCTGCTGTCTCAGCCTGATT
CTGGGGAACAAGGTCTTGAAATTGCTGGTAAATTGATTGATTCTGGTGCAGTTGATTTGGTCGTTATCGACTCGGTTGCG
GCCCTAGTACCTCGTGCGGAAATCGATGGGGATATCGGTGACAGCCACGTTGGTTTGCAGGCTCGGATGATGAGCCAAGC
CATGCGCAAACTGTCTGCTTCTATCAACAAAACCAAGACGATTGCCATCTTTATCAACCAGTTGCGTGAAAAAGTTGGTG
TTATGTTTGGAAATCCTGAAACAACACCAGGTGGACGTGCCCTCAAGTTCTACGCATCTGTCCGTCTGGATGTTCGTGGT
AATACCCAGATCAAGGGTACTGGCGATGCCAAGGATACCAACGTTGGTAAGGAAACCAAAATCAAAGTCGTTAAAAACAA
GGTAGCTCCGCCATTCAAGGAAGCCTTTGTGGAAATCATGTACGGAGAAGGTATTTCTAAGACAGGTGAGTTGATTAAGA
TTGCGACTGATTTGGATATCATTAAAAAAGCGGGTGCTTGGTACTCCTACAACGATGAAAAAATCGGCCAAGGTTCTGAA
AATGCCAAGAAATACTTGGCTGATCATCCAGAAGTCTTTGACGAAATCGACCGTCAAGTCCGTGTACGATACGGTTTGAT
TGAAGATGATGAGGCGGCAGAAACTGCGAAGGGTAAGGCTGAGGCTCCTATTGAAAAGTTGGAAGAAGTCACTCTTGACC
TAGATGATGCTTTTGACATTGAGGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3R9M7S0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis SK321

88.976

99.738

0.887

  recA Streptococcus mitis NCTC 12261

88.976

99.738

0.887

  recA Streptococcus pneumoniae Rx1

87.273

100

0.88

  recA Streptococcus pneumoniae D39

87.273

100

0.88

  recA Streptococcus pneumoniae R6

87.273

100

0.88

  recA Streptococcus pneumoniae TIGR4

87.273

100

0.88

  recA Streptococcus mutans UA159

85.117

100

0.853

  recA Streptococcus pyogenes NZ131

84.817

100

0.848

  recA Lactococcus lactis subsp. cremoris KW2

78.693

92.147

0.725

  recA Latilactobacillus sakei subsp. sakei 23K

70.909

86.387

0.613

  recA Bacillus subtilis subsp. subtilis str. 168

69.605

86.126

0.599

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.777

84.555

0.539

  recA Neisseria gonorrhoeae MS11

61.329

86.649

0.531

  recA Neisseria gonorrhoeae strain FA1090

61.329

86.649

0.531

  recA Neisseria gonorrhoeae MS11

61.329

86.649

0.531

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.398

86.126

0.529

  recA Vibrio cholerae strain A1552

61.846

85.079

0.526

  recA Vibrio cholerae O1 biovar El Tor strain E7946

61.846

85.079

0.526

  recA Acinetobacter baumannii D1279779

61.231

85.079

0.521

  recA Glaesserella parasuis strain SC1401

58.702

88.743

0.521

  recA Acinetobacter baylyi ADP1

60.615

85.079

0.516

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

57.101

90.314

0.516

  recA Helicobacter pylori strain NCTC11637

57.879

86.387

0.5

  recA Helicobacter pylori 26695

57.879

86.387

0.5

  recA Ralstonia pseudosolanacearum GMI1000

59.937

82.984

0.497

  recA Pseudomonas stutzeri DSM 10701

58.104

85.602

0.497


Multiple sequence alignment