Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DQN31_RS08565 | Genome accession | NZ_LS483421 |
| Coordinates | 1704242..1705378 (-) | Length | 378 a.a. |
| NCBI ID | WP_014407932.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain NCTC10877 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1695746..1723589 | 1704242..1705378 | within | 0 |
Gene organization within MGE regions
Location: 1695746..1723589
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN31_RS08520 (NCTC10877_01680) | nrdG | 1695746..1696360 (-) | 615 | WP_002982219.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| DQN31_RS08525 (NCTC10877_01681) | - | 1696375..1696869 (-) | 495 | WP_014407930.1 | GNAT family N-acetyltransferase | - |
| DQN31_RS08530 (NCTC10877_01682) | - | 1696878..1697813 (-) | 936 | WP_009880789.1 | Gfo/Idh/MocA family protein | - |
| DQN31_RS09085 (NCTC10877_01683) | - | 1697842..1697988 (-) | 147 | WP_002982210.1 | hypothetical protein | - |
| DQN31_RS08535 (NCTC10877_01684) | nrdD | 1698170..1700368 (-) | 2199 | WP_002992831.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| DQN31_RS08540 (NCTC10877_01685) | - | 1700465..1702024 (-) | 1560 | WP_014407931.1 | membrane protein | - |
| DQN31_RS08545 (NCTC10877_01687) | - | 1702437..1702742 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| DQN31_RS08550 (NCTC10877_01688) | ruvX | 1702754..1703173 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| DQN31_RS08555 (NCTC10877_01689) | - | 1703170..1703439 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| DQN31_RS08560 (NCTC10877_01690) | spx | 1703553..1703951 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| DQN31_RS08565 (NCTC10877_01691) | recA | 1704242..1705378 (-) | 1137 | WP_014407932.1 | recombinase RecA | Machinery gene |
| DQN31_RS08570 (NCTC10877_01692) | cinA | 1705467..1706738 (-) | 1272 | WP_011285266.1 | competence/damage-inducible protein A | Machinery gene |
| DQN31_RS08575 (NCTC10877_01693) | - | 1706807..1707367 (-) | 561 | WP_010922755.1 | DNA-3-methyladenine glycosylase I | - |
| DQN31_RS08580 (NCTC10877_01694) | ruvA | 1707377..1707973 (-) | 597 | WP_002992186.1 | Holliday junction branch migration protein RuvA | - |
| DQN31_RS08585 (NCTC10877_01695) | - | 1707975..1709195 (-) | 1221 | WP_014407934.1 | MDR family MFS transporter | - |
| DQN31_RS08590 (NCTC10877_01696) | mutL | 1709206..1711188 (-) | 1983 | WP_014407935.1 | DNA mismatch repair endonuclease MutL | - |
| DQN31_RS08595 (NCTC10877_01697) | - | 1711283..1712428 (-) | 1146 | WP_041174352.1 | tyrosine-type recombinase/integrase | - |
| DQN31_RS08605 (NCTC10877_01698) | - | 1713061..1713888 (-) | 828 | WP_014411910.1 | hypothetical protein | - |
| DQN31_RS08610 (NCTC10877_01699) | - | 1714295..1715086 (-) | 792 | WP_014411911.1 | helix-turn-helix domain-containing protein | - |
| DQN31_RS08615 (NCTC10877_01700) | - | 1715241..1715411 (+) | 171 | WP_032467166.1 | helix-turn-helix transcriptional regulator | - |
| DQN31_RS08620 (NCTC10877_01701) | - | 1715466..1715873 (+) | 408 | WP_002992501.1 | hypothetical protein | - |
| DQN31_RS08625 (NCTC10877_01702) | - | 1715887..1716504 (+) | 618 | WP_014411912.1 | Rha family transcriptional regulator | - |
| DQN31_RS08630 (NCTC10877_01703) | - | 1716738..1717070 (+) | 333 | WP_014407939.1 | hypothetical protein | - |
| DQN31_RS08635 (NCTC10877_01704) | - | 1717070..1717261 (+) | 192 | WP_080011075.1 | hypothetical protein | - |
| DQN31_RS08640 (NCTC10877_01705) | - | 1717273..1717635 (+) | 363 | WP_000206026.1 | hypothetical protein | - |
| DQN31_RS08645 (NCTC10877_01706) | - | 1717632..1717961 (+) | 330 | WP_000174505.1 | hypothetical protein | - |
| DQN31_RS08650 (NCTC10877_01707) | - | 1717964..1718236 (+) | 273 | WP_014407941.1 | hypothetical protein | - |
| DQN31_RS08655 (NCTC10877_01708) | - | 1718237..1719094 (+) | 858 | WP_014407942.1 | primase alpha helix C-terminal domain-containing protein | - |
| DQN31_RS08660 (NCTC10877_01709) | - | 1719063..1720751 (+) | 1689 | WP_014407943.1 | DNA primase family protein | - |
| DQN31_RS08665 (NCTC10877_01710) | - | 1721038..1721211 (+) | 174 | WP_000694577.1 | hypothetical protein | - |
| DQN31_RS09090 (NCTC10877_01711) | - | 1721217..1721390 (+) | 174 | WP_014407944.1 | hypothetical protein | - |
| DQN31_RS08670 (NCTC10877_01712) | - | 1721392..1721901 (+) | 510 | WP_014407945.1 | hypothetical protein | - |
| DQN31_RS08675 (NCTC10877_01713) | - | 1721975..1722463 (+) | 489 | WP_014407946.1 | hypothetical protein | - |
| DQN31_RS08685 (NCTC10877_01714) | - | 1722869..1723231 (+) | 363 | WP_014407947.1 | DUF1492 domain-containing protein | - |
| DQN31_RS08690 (NCTC10877_01715) | - | 1723206..1723589 (+) | 384 | WP_014407948.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40617.20 Da Isoelectric Point: 4.8973
>NTDB_id=1141075 DQN31_RS08565 WP_014407932.1 1704242..1705378(-) (recA) [Streptococcus pyogenes strain NCTC10877]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKDTKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKDTKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=1141075 DQN31_RS08565 WP_014407932.1 1704242..1705378(-) (recA) [Streptococcus pyogenes strain NCTC10877]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCTCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGATACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCTCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGATACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.