Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DQM46_RS09310 | Genome accession | NZ_LS483357 |
| Coordinates | 1809611..1810747 (-) | Length | 378 a.a. |
| NCBI ID | WP_002992179.1 | Uniprot ID | A0A4Q1QZP2 |
| Organism | Streptococcus pyogenes strain NCTC8326 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1801112..1829337 | 1809611..1810747 | within | 0 |
Gene organization within MGE regions
Location: 1801112..1829337
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM46_RS09265 (NCTC8326_01847) | nrdG | 1801112..1801726 (-) | 615 | WP_021299115.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| DQM46_RS09270 (NCTC8326_01848) | - | 1801741..1802235 (-) | 495 | WP_011055085.1 | GNAT family N-acetyltransferase | - |
| DQM46_RS09275 (NCTC8326_01849) | - | 1802244..1803179 (-) | 936 | WP_021299109.1 | Gfo/Idh/MocA family protein | - |
| DQM46_RS09875 (NCTC8326_01850) | - | 1803208..1803354 (-) | 147 | WP_011106921.1 | hypothetical protein | - |
| DQM46_RS09280 (NCTC8326_01851) | nrdD | 1803538..1805736 (-) | 2199 | WP_011529096.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| DQM46_RS09285 (NCTC8326_01852) | - | 1805833..1807392 (-) | 1560 | WP_011055088.1 | membrane protein | - |
| DQM46_RS09290 (NCTC8326_01854) | - | 1807806..1808111 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| DQM46_RS09295 (NCTC8326_01855) | ruvX | 1808123..1808542 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| DQM46_RS09300 (NCTC8326_01856) | - | 1808539..1808808 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| DQM46_RS09305 (NCTC8326_01857) | spx | 1808922..1809320 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| DQM46_RS09310 (NCTC8326_01858) | recA | 1809611..1810747 (-) | 1137 | WP_002992179.1 | recombinase RecA | Machinery gene |
| DQM46_RS09315 (NCTC8326_01859) | cinA | 1810836..1812107 (-) | 1272 | WP_002992182.1 | competence/damage-inducible protein A | Machinery gene |
| DQM46_RS09320 (NCTC8326_01860) | - | 1812176..1812736 (-) | 561 | WP_002992183.1 | DNA-3-methyladenine glycosylase I | - |
| DQM46_RS09325 (NCTC8326_01861) | ruvA | 1812746..1813342 (-) | 597 | WP_002992186.1 | Holliday junction branch migration protein RuvA | - |
| DQM46_RS09330 (NCTC8326_01862) | - | 1813344..1814564 (-) | 1221 | WP_011529098.1 | MDR family MFS transporter | - |
| DQM46_RS09335 (NCTC8326_01863) | mutL | 1814575..1816557 (-) | 1983 | WP_021299132.1 | DNA mismatch repair endonuclease MutL | - |
| DQM46_RS09340 (NCTC8326_01864) | - | 1816652..1817797 (-) | 1146 | WP_021299091.1 | tyrosine-type recombinase/integrase | - |
| DQM46_RS10060 | - | 1818000..1818143 (+) | 144 | WP_011185066.1 | putative holin-like toxin | - |
| DQM46_RS09350 (NCTC8326_01866) | - | 1819041..1819688 (-) | 648 | WP_011529101.1 | helix-turn-helix domain-containing protein | - |
| DQM46_RS09355 (NCTC8326_01867) | - | 1819854..1820051 (+) | 198 | WP_011529102.1 | helix-turn-helix domain-containing protein | - |
| DQM46_RS09360 (NCTC8326_01868) | - | 1820065..1820679 (+) | 615 | WP_021299093.1 | Bro-N domain-containing protein | - |
| DQM46_RS09365 (NCTC8326_01869) | - | 1820706..1820948 (+) | 243 | WP_021299105.1 | hypothetical protein | - |
| DQM46_RS09370 (NCTC8326_01870) | - | 1821204..1821536 (+) | 333 | WP_011529105.1 | hypothetical protein | - |
| DQM46_RS09375 (NCTC8326_01871) | - | 1821533..1821754 (+) | 222 | WP_011529106.1 | hypothetical protein | - |
| DQM46_RS09380 (NCTC8326_01872) | - | 1821757..1821948 (+) | 192 | WP_011529107.1 | hypothetical protein | - |
| DQM46_RS09385 (NCTC8326_01873) | - | 1821960..1822322 (+) | 363 | WP_000206026.1 | hypothetical protein | - |
| DQM46_RS09390 (NCTC8326_01874) | - | 1822319..1822648 (+) | 330 | WP_011529108.1 | hypothetical protein | - |
| DQM46_RS09395 (NCTC8326_01875) | - | 1822651..1822923 (+) | 273 | WP_011529109.1 | hypothetical protein | - |
| DQM46_RS09400 (NCTC8326_01876) | - | 1822924..1823784 (+) | 861 | WP_011529110.1 | primase alpha helix C-terminal domain-containing protein | - |
| DQM46_RS09405 (NCTC8326_01877) | - | 1823859..1825298 (+) | 1440 | WP_042769766.1 | phage/plasmid primase, P4 family | - |
| DQM46_RS09410 | - | 1825575..1825748 (+) | 174 | WP_042769761.1 | hypothetical protein | - |
| DQM46_RS09880 | - | 1825754..1825927 (+) | 174 | WP_011529113.1 | hypothetical protein | - |
| DQM46_RS09415 (NCTC8326_01878) | - | 1825929..1826195 (+) | 267 | WP_011529114.1 | hypothetical protein | - |
| DQM46_RS09420 | - | 1826202..1826360 (+) | 159 | WP_011529115.1 | DUF2292 domain-containing protein | - |
| DQM46_RS09425 (NCTC8326_01879) | - | 1826461..1827063 (+) | 603 | WP_011529116.1 | hypothetical protein | - |
| DQM46_RS09430 (NCTC8326_01880) | - | 1827053..1827382 (+) | 330 | WP_021299097.1 | hypothetical protein | - |
| DQM46_RS09435 (NCTC8326_01881) | - | 1827658..1827924 (+) | 267 | WP_227868883.1 | hypothetical protein | - |
| DQM46_RS09440 (NCTC8326_01882) | - | 1828030..1828443 (+) | 414 | WP_012560493.1 | DUF1492 domain-containing protein | - |
| DQM46_RS09445 (NCTC8326_01883) | - | 1828518..1828718 (+) | 201 | WP_011529120.1 | hypothetical protein | - |
| DQM46_RS09450 (NCTC8326_01884) | - | 1828785..1828979 (+) | 195 | Protein_1758 | DUF1492 domain-containing protein | - |
| DQM46_RS09455 (NCTC8326_01885) | - | 1828954..1829337 (+) | 384 | WP_011285285.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40631.23 Da Isoelectric Point: 4.9004
>NTDB_id=1138353 DQM46_RS09310 WP_002992179.1 1809611..1810747(-) (recA) [Streptococcus pyogenes strain NCTC8326]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=1138353 DQM46_RS09310 WP_002992179.1 1809611..1810747(-) (recA) [Streptococcus pyogenes strain NCTC8326]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCTCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTCGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATTTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAGGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCTCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTCGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATTTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAGGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.