Detailed information NTG1132451

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: H7A87_RS08955
• Genome accession: NZ_LR861805
• Coordinates: 2078403..2079437 (+)
• Length: 344 a.a.
• NCBI ID: WP_016904265.1
• Uniprot ID: A0A2N7V3Y4
• Organism: Xanthomonas sp. CPBF 426 isolate
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2073403..2084437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7A87_RS08940 (XSP_001796)	-	2074548..2075042 (+)	495	WP_180496952.1	CinA family protein	-
H7A87_RS08945 (XSP_001797)	ubiB	2075818..2077494 (+)	1677	WP_115677095.1	2-polyprenylphenol 6-hydroxylase	-
H7A87_RS08950 (XSP_001798)	lexA	2077586..2078230 (+)	645	WP_104596802.1	transcriptional repressor LexA	-
H7A87_RS08955 (XSP_001799)	recA	2078403..2079437 (+)	1035	WP_016904265.1	recombinase RecA	Machinery gene
H7A87_RS08960 (XSP_001800)	recX	2079713..2080201 (+)	489	WP_104582899.1	recombination regulator RecX	-
H7A87_RS08965 (XSP_001801)	alaS	2080303..2082951 (+)	2649	WP_115676777.1	alanine--tRNA ligase	-
H7A87_RS08970 (XSP_001802)	csrA	2083090..2083302 (+)	213	WP_003481884.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37162.75 Da
• Isoelectric Point: 5.3743

>NTDB_id=1132451 H7A87_RS08955 WP_016904265.1 2078403..2079437(+) (recA) [Xanthomonas sp. CPBF 426 isolate]
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKKGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRHKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVEKAGAWYSYGEERIGQGKDNARGYLRDNPQVAVRL
EAELREKFQPAEAPREAGDDVEKE

Nucleotide

• Length: 1035 bp

>NTDB_id=1132451 H7A87_RS08955 WP_016904265.1 2078403..2079437(+) (recA) [Xanthomonas sp. CPBF 426 isolate]
ATGGATGAGAACAAGAAGCGCGCCCTTTCCGCCGCACTGAGCCAGATCGAAAAGCAATTCGGCAAGGGCTCGGTGATGCG
CATGGGCGACCGTGTGATCGAGGCCGTCGAAGTCATTCCGACCGGCTCGCTGATGCTGGACATCGCACTGGGGATCGGCG
GCCTGCCCAAGGGCCGTGTGGTCGAAATCTACGGTCCGGAATCGTCGGGCAAGACCACCCTGACCCTGCAGGCGATTGCC
GAATGCCAGAAGAAGGGCGGCACCGCAGCCTTCATCGACGCCGAGCACGCGTTGGACCCGATCTATGCCGCCAAGCTGGG
CGTCAACGTCGACGACCTGCTGCTGTCGCAGCCGGATACCGGCGAGCAGGCGCTGGAAATCGCCGACATGCTGGTGCGCT
CCGGTTCGGTGGACATCGTGGTGGTCGACTCGGTCGCCGCCCTGACCCCCAAGGCCGAAATCGAAGGCGAAATGGGTGAC
CAGCTGCCGGGTCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTGACCGGCAACATCAAGCGTTCCAACACATT
GGTGGTCTTCATCAACCAGTTGCGCCACAAGATCGGCGTGATGATGCCGGGCCAGAGCCCGGAAGTGACCACCGGCGGCA
ACGCGCTGAAGTTCTACGCTTCGGTCCGTCTGGATATCCGTCGTATCGGCGCGATCAAGAAGGGCGACGAGATCATCGGC
AACCAGACCAAGATCAAGGTGGTCAAGAACAAGCTGGCGCCTCCGTTCAAGCAGGTCGTGACCGAAATCCTCTACGGCGA
AGGCATCAGCCGCGAGGGTGAGCTGATCGACATGGGCGTGGAAGCCAAGCTGGTCGAGAAAGCCGGCGCCTGGTACAGCT
ATGGCGAAGAACGCATCGGGCAGGGCAAGGACAACGCACGCGGCTATCTTCGCGACAACCCGCAGGTTGCGGTGCGGCTG
GAAGCCGAGCTGCGCGAGAAGTTCCAGCCGGCCGAAGCGCCGCGCGAAGCCGGTGACGACGTCGAGAAGGAATGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

3D structure

• AlphaFold DB: A0A2N7V3Y4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	69.767	100	0.698
recA	Pseudomonas stutzeri DSM 10701	70.623	97.965	0.692
recA	Vibrio cholerae strain A1552	68.103	100	0.689
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.103	100	0.689
recA	Ralstonia pseudosolanacearum GMI1000	75.399	90.988	0.686
recA	Acinetobacter baumannii D1279779	71.646	95.349	0.683
recA	Neisseria gonorrhoeae MS11	68.405	94.767	0.648
recA	Neisseria gonorrhoeae MS11	68.405	94.767	0.648
recA	Neisseria gonorrhoeae strain FA1090	68.405	94.767	0.648
recA	Glaesserella parasuis strain SC1401	68.111	93.895	0.64
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.174	97.093	0.613
recA	Latilactobacillus sakei subsp. sakei 23K	62.275	97.093	0.605
recA	Bacillus subtilis subsp. subtilis str. 168	63.077	94.477	0.596
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.353	92.151	0.593
recA	Helicobacter pylori strain NCTC11637	60.843	96.512	0.587
recA	Helicobacter pylori 26695	60.542	96.512	0.584
recA	Streptococcus pneumoniae Rx1	60.976	95.349	0.581
recA	Streptococcus mitis SK321	60.976	95.349	0.581
recA	Streptococcus pneumoniae D39	60.976	95.349	0.581
recA	Streptococcus pneumoniae R6	60.976	95.349	0.581
recA	Streptococcus pneumoniae TIGR4	60.976	95.349	0.581
recA	Streptococcus pyogenes NZ131	60.606	95.93	0.581
recA	Streptococcus mitis NCTC 12261	60.671	95.349	0.578
recA	Streptococcus mutans UA159	60.303	95.93	0.578
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.182	95.93	0.558
recA	Lactococcus lactis subsp. cremoris KW2	59.077	94.477	0.558