Detailed information NTG1131252

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: H1W98_RS00370
• Genome accession: NZ_LR822026
• Coordinates: 64573..65712 (+)
• Length: 379 a.a.
• NCBI ID: WP_179972485.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_967
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	66363..67619	64573..65712	flank	651

Gene organization within MGE regions

Location: 64573..67619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1W98_RS00370 (STHERMO_0066)	recA	64573..65712 (+)	1140	WP_179972485.1	recombinase RecA	Machinery gene
H1W98_RS00375 (STHERMO_0067)	spx	65889..66287 (+)	399	WP_179972486.1	transcriptional regulator Spx	-
H1W98_RS00380 (STHERMO_0068)	-	66370..67619 (-)	1250	Protein_54	ISL3 family transposase	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40852.47 Da
• Isoelectric Point: 4.9627

>NTDB_id=1131252 H1W98_RS00370 WP_179972485.1 64573..65712(+) (recA) [Streptococcus thermophilus isolate STH_CIRM_967]
MAKKTKKTEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQTQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDKKDQNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISQTGELVKIASDLGIIQKAGAWFSYNGEKIGQGSE
NAKKYLADHPEIFAEIDHKVRVHYGLIELNEDDVVEDTQVEGTSDELILDLDSTIEIEE

Nucleotide

• Length: 1140 bp

>NTDB_id=1131252 H1W98_RS00370 WP_179972485.1 64573..65712(+) (recA) [Streptococcus thermophilus isolate STH_CIRM_967]
GTGGCTAAGAAAACAAAGAAAACAGAAGAAATCACAAAGAAGTTTGGTGATGAGCGTCGCAAAGCACTCGACGATGCATT
AAAAAACATTGAAAAAGATTTTGGTAAGGGTGCAGTTATGCGTCTTGGTGAGCGTGCAGAGCAAAAAGTTCAGGTTATGA
GCTCAGGCTCGCTAGCTTTGGATATTGCTCTTGGTGCGGGTGGTTACCCTAAAGGTCGTATTATTGAAATTTACGGACCA
GAATCATCAGGTAAAACAACTGTTGCCCTTCATGCAGTTGCTCAGACTCAAAAAGAAGGTGGTATCGCAGCTTTTATCGA
TGCCGAGCATGCTCTTGACCCTGCATATGCAGCAGCTCTAGGTGTTAATATCGATGAGCTTCTTTTGTCGCAACCTGATT
CTGGTGAGCAAGGTCTCGAAATTGCAGGTAAGCTGATTGACTCTGGTGCAGTGGATTTAGTTGTTGTTGACTCAGTTGCG
GCCTTGGTACCACGTGCAGAAATTGATGGAGATATTGGTGACAGTCATGTAGGACTTCAAGCGCGTATGATGAGTCAAGC
CATGCGTAAACTTTCTGCATCTATTAATAAAACAAAAACGATTGCTATCTTTATTAACCAGTTGCGTGAAAAAGTTGGTA
TCATGTTTGGTAACCCAGAGACTACCCCAGGTGGACGTGCTTTAAAATTCTATGCATCAGTACGTCTTGATGTACGTGGT
AATACACAAATTAAAGGAACCGGTGACAAAAAGGACCAAAATGTTGGTAAGGAAACTAAGATTAAGGTTGTTAAAAACAA
AGTTGCTCCACCATTTAAAGAAGCTTTTGTTGAAATTATGTATGGCGAAGGAATTTCACAAACCGGTGAACTCGTAAAAA
TTGCAAGTGATTTAGGCATTATTCAGAAAGCCGGAGCTTGGTTCTCATATAATGGGGAGAAAATTGGTCAAGGATCTGAA
AATGCTAAAAAGTATTTAGCAGATCACCCTGAGATTTTTGCAGAAATCGATCATAAAGTACGCGTACACTACGGTCTGAT
TGAGCTAAATGAGGACGATGTTGTTGAAGATACACAAGTTGAAGGCACGTCTGATGAACTCATTCTAGATCTTGATTCAA
CCATTGAAATTGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (21-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mutans UA159	89.091	100	0.905
recA	Streptococcus pyogenes NZ131	89.446	100	0.894
recA	Streptococcus mitis SK321	86.614	100	0.871
recA	Streptococcus mitis NCTC 12261	86.614	100	0.871
recA	Streptococcus pneumoniae Rx1	85.195	100	0.865
recA	Streptococcus pneumoniae D39	85.195	100	0.865
recA	Streptococcus pneumoniae R6	85.195	100	0.865
recA	Streptococcus pneumoniae TIGR4	85.195	100	0.865
recA	Lactococcus lactis subsp. cremoris KW2	77.714	92.348	0.718
recA	Latilactobacillus sakei subsp. sakei 23K	66.575	95.515	0.636
recA	Bacillus subtilis subsp. subtilis str. 168	68.085	86.807	0.591
recA	Neisseria gonorrhoeae MS11	59.544	92.612	0.551
recA	Neisseria gonorrhoeae MS11	59.544	92.612	0.551
recA	Neisseria gonorrhoeae strain FA1090	59.544	92.612	0.551
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.472	89.446	0.541
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.539	85.224	0.533
recA	Glaesserella parasuis strain SC1401	59.412	89.71	0.533
recA	Acinetobacter baylyi ADP1	62.154	85.752	0.533
recA	Acinetobacter baumannii D1279779	62.154	85.752	0.533
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.231	85.752	0.525
recA	Vibrio cholerae strain A1552	61.231	85.752	0.525
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.185	89.974	0.515
recA	Pseudomonas stutzeri DSM 10701	58.462	85.752	0.501
recA	Ralstonia pseudosolanacearum GMI1000	57.576	87.071	0.501
recA	Helicobacter pylori 26695	56.97	87.071	0.496
recA	Helicobacter pylori strain NCTC11637	56.97	87.071	0.496