Detailed information NTG1130166

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: H1C97_RS12655
• Genome accession: NZ_LR778151
• Coordinates: 2619566..2620627 (-)
• Length: 353 a.a.
• NCBI ID: WP_000963141.1
• Uniprot ID: A0A1L4IV26
• Organism: Escherichia coli isolate SC476
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2614566..2625627

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1C97_RS12640	csrA	2615644..2615829 (-)	186	WP_000906486.1	carbon storage regulator CsrA	-
H1C97_RS12645	alaS	2616064..2618695 (-)	2632	Protein_2484	alanine--tRNA ligase	-
H1C97_RS12650	recX	2618823..2619323 (-)	501	WP_000140506.1	recombination regulator RecX	-
H1C97_RS12655	recA	2619566..2620627 (-)	1062	WP_000963141.1	recombinase RecA	Machinery gene
H1C97_RS12660	pncC	2620707..2621204 (-)	498	WP_000132231.1	nicotinamide-nucleotide amidase	-
H1C97_RS12665	mltB	2621349..2622434 (-)	1086	WP_001299653.1	lytic murein transglycosylase B	-
H1C97_RS12670	srlA	2622690..2623253 (+)	564	WP_000573321.1	PTS glucitol/sorbitol transporter subunit IIC	-
H1C97_RS12675	srlE	2623250..2624209 (+)	960	WP_000148875.1	PTS glucitol/sorbitol transporter subunit IIB	-
H1C97_RS12680	srlB	2624220..2624591 (+)	372	WP_000216215.1	PTS glucitol/sorbitol transporter subunit IIA	-
H1C97_RS12685	srlD	2624595..2625374 (+)	780	WP_001077358.1	sorbitol-6-phosphate dehydrogenase	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 38031.41 Da
• Isoelectric Point: 4.7573

>NTDB_id=1130166 H1C97_RS12655 WP_000963141.1 2619566..2620627(-) (recA) [Escherichia coli isolate SC476]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEDVAETNEDF

Nucleotide

• Length: 1062 bp

>NTDB_id=1130166 H1C97_RS12655 WP_000963141.1 2619566..2620627(-) (recA) [Escherichia coli isolate SC476]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCGGAATCTTCCGGTAAAACCACGCTGACGCTGCAGGTG
ATCGCCGCAGCGCAGCGTGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTCGATATCGATAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGG
CGCGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCACCGTTTAAACAGGCTGAATTTCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAACTGGTTGACCTGGGCGTAAAAGAGAAGCTGATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCAACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGACGTAGC
AGAAACTAACGAAGATTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: A0A1L4IV26

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	84.29	93.768	0.79
recA	Vibrio cholerae strain A1552	84.29	93.768	0.79
recA	Pseudomonas stutzeri DSM 10701	74.184	95.467	0.708
recA	Acinetobacter baumannii D1279779	74.085	92.918	0.688
recA	Glaesserella parasuis strain SC1401	69.741	98.3	0.686
recA	Acinetobacter baylyi ADP1	73.78	92.918	0.686
recA	Ralstonia pseudosolanacearum GMI1000	68.278	93.768	0.64
recA	Neisseria gonorrhoeae MS11	69.018	92.351	0.637
recA	Neisseria gonorrhoeae MS11	69.018	92.351	0.637
recA	Neisseria gonorrhoeae strain FA1090	69.018	92.351	0.637
recA	Streptococcus mitis SK321	60.286	99.15	0.598
recA	Streptococcus mitis NCTC 12261	60.286	99.15	0.598
recA	Streptococcus pneumoniae Rx1	60.345	98.584	0.595
recA	Streptococcus pneumoniae TIGR4	60.345	98.584	0.595
recA	Streptococcus pneumoniae R6	60.345	98.584	0.595
recA	Streptococcus pneumoniae D39	60.345	98.584	0.595
recA	Helicobacter pylori strain NCTC11637	61.721	95.467	0.589
recA	Helicobacter pylori 26695	61.424	95.467	0.586
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.654	91.785	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.661	94.334	0.572
recA	Streptococcus pyogenes NZ131	62.154	92.068	0.572
recA	Streptococcus mutans UA159	62.154	92.068	0.572
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	90.935	0.567
recA	Latilactobacillus sakei subsp. sakei 23K	61.538	92.068	0.567
recA	Lactococcus lactis subsp. cremoris KW2	61.61	91.501	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.059	90.935	0.555