Detailed information NTG1130131

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: H1C96_RS20115
• Genome accession: NZ_LR778149
• Coordinates: 4187076..4188137 (+)
• Length: 353 a.a.
• NCBI ID: WP_000963143.1
• Uniprot ID: A0AAV3H3S5
• Organism: Escherichia coli isolate SC487
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4182076..4193137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1C96_RS20085	srlD	4182329..4183108 (-)	780	WP_001077358.1	sorbitol-6-phosphate dehydrogenase	-
H1C96_RS20090	srlB	4183112..4183483 (-)	372	WP_000216215.1	PTS glucitol/sorbitol transporter subunit IIA	-
H1C96_RS20095	srlE	4183494..4184453 (-)	960	WP_000148875.1	PTS glucitol/sorbitol transporter subunit IIB	-
H1C96_RS20100	srlA	4184450..4185013 (-)	564	WP_000573321.1	PTS glucitol/sorbitol transporter subunit IIC	-
H1C96_RS20105	mltB	4185269..4186354 (+)	1086	WP_001295177.1	lytic murein transglycosylase B	-
H1C96_RS20110	pncC	4186499..4186996 (+)	498	WP_000132231.1	nicotinamide-nucleotide amidase	-
H1C96_RS20115	recA	4187076..4188137 (+)	1062	WP_000963143.1	recombinase RecA	Machinery gene
H1C96_RS20120	recX	4188380..4188880 (+)	501	WP_000140506.1	recombination regulator RecX	-
H1C96_RS20125	alaS	4189008..4191638 (+)	2631	WP_000047176.1	alanine--tRNA ligase	-
H1C96_RS20130	csrA	4191873..4192058 (+)	186	WP_000906486.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37973.37 Da
• Isoelectric Point: 4.8171

>NTDB_id=1130131 H1C96_RS20115 WP_000963143.1 4187076..4188137(+) (recA) [Escherichia coli isolate SC487]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEI
EKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF

Nucleotide

• Length: 1062 bp

>NTDB_id=1130131 H1C96_RS20115 WP_000963143.1 4187076..4188137(+) (recA) [Escherichia coli isolate SC487]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGG
CAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCGGAATCTTCCGGTAAAACCACGCTGACGCTGCAGGTG
ATCGCCGCAGCGCAGCGTGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAA
ACTGGGCGTCGATATCGACAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGG
CGCGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATC
GGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGT
AGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGCGA
AGGTATCAACTTCTACGGCGAACTGGTTGACCTGGGCGTAAAAGAGAAGCTGATCGAGAAAGCAGGCGCGTGGTACAGCT
ACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCGACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATC
GAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGACAGCGAAGGCGTAGC
AGAAACTAACGAAGATTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	84.29	93.768	0.79
recA	Vibrio cholerae strain A1552	84.29	93.768	0.79
recA	Pseudomonas stutzeri DSM 10701	74.184	95.467	0.708
recA	Acinetobacter baumannii D1279779	74.085	92.918	0.688
recA	Acinetobacter baylyi ADP1	73.78	92.918	0.686
recA	Glaesserella parasuis strain SC1401	69.452	98.3	0.683
recA	Neisseria gonorrhoeae MS11	69.018	92.351	0.637
recA	Neisseria gonorrhoeae MS11	69.018	92.351	0.637
recA	Neisseria gonorrhoeae strain FA1090	69.018	92.351	0.637
recA	Ralstonia pseudosolanacearum GMI1000	70.159	89.235	0.626
recA	Streptococcus mitis SK321	60.286	99.15	0.598
recA	Streptococcus mitis NCTC 12261	60.286	99.15	0.598
recA	Helicobacter pylori strain NCTC11637	61.721	95.467	0.589
recA	Helicobacter pylori 26695	61.424	95.467	0.586
recA	Streptococcus pneumoniae TIGR4	63.467	91.501	0.581
recA	Streptococcus pneumoniae Rx1	63.467	91.501	0.581
recA	Streptococcus pneumoniae D39	63.467	91.501	0.581
recA	Streptococcus pneumoniae R6	63.467	91.501	0.581
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.654	91.785	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.661	94.334	0.572
recA	Streptococcus mutans UA159	62.154	92.068	0.572
recA	Streptococcus pyogenes NZ131	62.154	92.068	0.572
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	90.935	0.567
recA	Latilactobacillus sakei subsp. sakei 23K	61.538	92.068	0.567
recA	Lactococcus lactis subsp. cremoris KW2	61.61	91.501	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.059	90.935	0.555