Detailed information NTG1129469

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: STREPSUIS_RS00385
• Genome accession: NZ_LR738722
• Coordinates: 66188..67336 (+)
• Length: 382 a.a.
• NCBI ID: WP_023369045.1
• Uniprot ID: A0A822VL11
• Organism: Streptococcus suis isolate 861160
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 61188..72336

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STREPSUIS_RS00365	ruvA	63034..63624 (+)	591	WP_011921679.1	Holliday junction branch migration protein RuvA	-
STREPSUIS_RS00375	-	64349..64918 (+)	570	WP_012774893.1	DNA-3-methyladenine glycosylase I	-
STREPSUIS_RS00380	cinA	64955..66136 (+)	1182	WP_023369043.1	competence/damage-inducible protein A	Machinery gene
STREPSUIS_RS00385	recA	66188..67336 (+)	1149	WP_023369045.1	recombinase RecA	Machinery gene
STREPSUIS_RS00390	spx	67572..67970 (+)	399	WP_002939362.1	transcriptional regulator Spx	-
STREPSUIS_RS00395	-	68070..68336 (+)	267	WP_002939360.1	IreB family regulatory phosphoprotein	-
STREPSUIS_RS00400	ruvX	68336..68755 (+)	420	WP_002939356.1	Holliday junction resolvase RuvX	-
STREPSUIS_RS00405	-	68767..69099 (+)	333	WP_023369048.1	DUF1292 domain-containing protein	-
STREPSUIS_RS00410	-	69306..69884 (+)	579	WP_012774895.1	nucleotidyltransferase family protein	-
STREPSUIS_RS00415	comX/sigX	69957..70223 (+)	267	WP_014635810.1	hypothetical protein	Regulator
STREPSUIS_RS00420	rpsJ	70546..70854 (+)	309	WP_014735259.1	30S ribosomal protein S10	-
STREPSUIS_RS00425	rplC	70991..71617 (+)	627	WP_011921686.1	50S ribosomal protein L3	-
STREPSUIS_RS00430	rplD	71642..72265 (+)	624	WP_004195490.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 40805.51 Da
• Isoelectric Point: 4.8910

>NTDB_id=1129469 STREPSUIS_RS00385 WP_023369045.1 66188..67336(+) (recA) [Streptococcus suis isolate 861160]
MAKKPTKKLEDITKKFGDERKKALDDALKSIEKDFGKGAVMRLGERAEQKVQVMSSGSLSIDIALGAGGYPKGRIIEIYG
PESSGKTTVALHAVAQAQKDGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSV
AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTVAIFINQLREKVGVMFGNPETTPGGRALKFYASVRMDVR
GNTQIKGTGDKKDQNVGKETKVKIVKNKVAPPFKEAVVEIMYGEGISRTGELIEIGSNLGIIQKAGAWYSYNGEKIGQGS
ENAKKFLADNPAIFDEIDRKIRVHYGLIEADGVEEVATEEAPVAEEIQDVILDLDGGIELED

Nucleotide

• Length: 1149 bp

>NTDB_id=1129469 STREPSUIS_RS00385 WP_023369045.1 66188..67336(+) (recA) [Streptococcus suis isolate 861160]
TTGGCTAAGAAACCAACTAAGAAATTAGAAGATATTACAAAGAAATTTGGCGATGAACGTAAAAAAGCGCTGGATGATGC
CCTAAAATCAATTGAAAAAGATTTTGGTAAGGGCGCTGTCATGCGTCTTGGTGAGCGTGCTGAGCAAAAAGTTCAAGTCA
TGAGTTCAGGTAGCTTGTCAATCGACATTGCGCTTGGAGCGGGTGGCTATCCGAAAGGTCGTATCATTGAGATTTACGGT
CCTGAGAGCTCGGGTAAGACAACTGTTGCTCTACACGCAGTAGCTCAAGCCCAGAAAGATGGTGGTATTGCTGCCTTTAT
CGATGCGGAGCATGCCTTGGATCCAGCCTATGCAGCAGCTCTTGGTGTCAATATTGATGAGTTGCTCTTGTCCCAGCCAG
ACTCAGGGGAACAAGGTCTTGAAATTGCAGGCAAGCTGATCGACTCTGGTGCGGTTGACTTGGTTGTTGTTGACTCGGTT
GCAGCCCTTGTACCACGTGCAGAAATCGATGGCGATATTGGTGATAGTCATGTTGGCTTGCAGGCTCGCATGATGAGTCA
GGCCATGCGCAAACTCGGTGCATCCATCAACAAAACAAAAACAGTAGCTATTTTCATTAACCAATTACGTGAAAAAGTCG
GTGTCATGTTTGGTAACCCTGAAACAACACCTGGTGGTCGTGCGCTAAAATTCTATGCATCTGTCCGTATGGATGTTCGT
GGAAACACACAAATCAAAGGAACAGGCGACAAGAAAGATCAAAACGTTGGTAAGGAAACCAAGGTGAAGATTGTGAAGAA
CAAGGTGGCGCCACCATTTAAAGAAGCTGTTGTTGAAATCATGTACGGTGAAGGAATTTCTCGCACAGGTGAATTGATTG
AGATTGGTAGCAACCTCGGCATCATCCAAAAAGCAGGTGCTTGGTATTCATATAATGGAGAAAAAATTGGCCAAGGTTCT
GAAAATGCTAAGAAATTCTTAGCAGATAATCCAGCAATCTTTGATGAAATTGACCGCAAGATACGTGTTCATTATGGATT
GATTGAAGCAGATGGAGTTGAAGAAGTTGCGACCGAAGAAGCTCCTGTTGCGGAAGAAATCCAAGATGTTATCCTAGATC
TTGATGGCGGTATTGAATTAGAAGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (22-287)

3D structure

• AlphaFold DB: A0A822VL11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mutans UA159	86.198	100	0.866
recA	Streptococcus pyogenes NZ131	85.34	100	0.853
recA	Streptococcus pneumoniae D39	83.854	100	0.843
recA	Streptococcus pneumoniae R6	83.854	100	0.843
recA	Streptococcus pneumoniae TIGR4	83.854	100	0.843
recA	Streptococcus pneumoniae Rx1	83.854	100	0.843
recA	Streptococcus mitis NCTC 12261	83.508	100	0.835
recA	Streptococcus mitis SK321	82.723	100	0.827
recA	Lactococcus lactis subsp. cremoris KW2	75.143	91.623	0.688
recA	Latilactobacillus sakei subsp. sakei 23K	64.507	92.932	0.599
recA	Bacillus subtilis subsp. subtilis str. 168	68.085	86.126	0.586
recA	Acinetobacter baumannii D1279779	60.116	90.576	0.545
recA	Neisseria gonorrhoeae MS11	62.236	86.649	0.539
recA	Neisseria gonorrhoeae MS11	62.236	86.649	0.539
recA	Neisseria gonorrhoeae strain FA1090	62.236	86.649	0.539
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.479	87.435	0.529
recA	Pseudomonas stutzeri DSM 10701	57.386	92.147	0.529
recA	Glaesserella parasuis strain SC1401	59.118	89.005	0.526
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.944	89.267	0.526
recA	Acinetobacter baylyi ADP1	61.538	85.079	0.524
recA	Vibrio cholerae strain A1552	61.538	85.079	0.524
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.538	85.079	0.524
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.61	86.649	0.508
recA	Ralstonia pseudosolanacearum GMI1000	60.568	82.984	0.503
recA	Helicobacter pylori strain NCTC11637	57.879	86.387	0.5
recA	Helicobacter pylori 26695	57.879	86.387	0.5