Detailed information NTG1128989

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FX029_RS05105
• Genome accession: NZ_LR698988
• Coordinates: 961577..962638 (+)
• Length: 353 a.a.
• NCBI ID: WP_052915978.1
• Uniprot ID: -
• Organism: Lacticaseibacillus paracasei isolate MGYG-HGUT-02388
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 956577..967638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FX029_RS05080	ymfI	957528..958256 (+)	729	WP_003569514.1	elongation factor P 5-aminopentanone reductase	-
FX029_RS05085	-	958343..959272 (+)	930	WP_003569516.1	helix-turn-helix domain-containing protein	-
FX029_RS05090	pgsA	959269..959862 (+)	594	WP_003569518.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FX029_RS05100	cinA	960279..961520 (+)	1242	WP_003569520.1	competence/damage-inducible protein A	Machinery gene
FX029_RS05105	recA	961577..962638 (+)	1062	WP_052915978.1	recombinase RecA	Machinery gene
FX029_RS05110	rny	962933..964504 (+)	1572	WP_003657913.1	ribonuclease Y	-
FX029_RS05115	-	964598..965248 (-)	651	WP_003569527.1	YigZ family protein	-
FX029_RS05120	-	965472..966890 (+)	1419	WP_052915958.1	IS5-like element ISLrh3 family transposase	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37763.95 Da
• Isoelectric Point: 5.3299

>NTDB_id=1128989 FX029_RS05105 WP_052915978.1 961577..962638(+) (recA) [Lacticaseibacillus paracasei isolate MGYG-HGUT-02388]
MAGDERQKALDVALKKIEKNFGKDAIMRMGAKADTRVSVVSSGSLAVDDALGVGGFPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDELLLSQPDTGEQGLEIADELVASGAIDIVVIDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGIIFGSPETTPGGRALKFYATVRLEIRRSEQIKTGADVVGN
RTKIKVVKNKVAPPFRTAIVDIMYGQGISQTGELVDMAVERDIVEKAGSWYAYQGERIGQGRENAKTYLDNHADLQQTIK
QQVRVAYGMAAAPGRETASVSEDQPEIPQQAEV

Nucleotide

• Length: 1062 bp

>NTDB_id=1128989 FX029_RS05105 WP_052915978.1 961577..962638(+) (recA) [Lacticaseibacillus paracasei isolate MGYG-HGUT-02388]
ATGGCAGGAGACGAACGCCAGAAAGCATTGGATGTTGCACTGAAAAAGATTGAAAAAAATTTTGGTAAAGACGCGATTAT
GCGAATGGGTGCTAAGGCGGACACGCGCGTTTCCGTTGTCTCTAGCGGCTCACTTGCCGTTGATGATGCACTTGGTGTTG
GGGGCTTTCCGCGCGGACGAATTGTCGAAATTTATGGACCGGAAAGTTCCGGCAAAACAACCGTCGCGCTGCATGCTGTT
GCTGAAGTGCAGAAGCAAGGCGGTACTGCCGCCTATATTGATGCCGAGAATGCGATGGATCCCAAGTACGCAACTGCTTT
GGGCGTCAATATTGACGAATTATTGCTCTCCCAGCCAGACACAGGCGAACAAGGGCTGGAGATTGCTGATGAACTAGTCG
CGTCTGGTGCCATTGATATTGTGGTGATTGATTCAGTTGCTGCTTTGGTGCCGCGGGCTGAGATTGAGGGCGATATGGGG
GATGCCCATGTTGGCTTGCAAGCCCGATTAATGTCACAGGCGTTACGTAAGTTATCCGGTTCCATCAATAAGACAAAAAC
GATTGCTTTATTCATTAATCAGATTCGTGAGAAAGTCGGGATCATTTTTGGGAGTCCGGAAACGACACCAGGTGGTCGTG
CCTTGAAGTTTTATGCGACTGTTCGGTTAGAGATCCGGCGGTCGGAACAAATCAAGACAGGCGCAGATGTCGTCGGCAAT
CGCACTAAAATCAAAGTGGTCAAGAATAAGGTTGCACCGCCTTTTCGAACAGCAATTGTGGATATCATGTATGGCCAAGG
CATTTCGCAAACTGGCGAACTTGTCGACATGGCCGTTGAGAGAGATATTGTTGAAAAAGCAGGGTCATGGTACGCGTATC
AAGGTGAACGCATCGGCCAAGGTCGCGAAAACGCTAAGACATATCTTGATAACCACGCTGATCTTCAGCAGACGATTAAA
CAACAGGTTCGCGTGGCTTATGGTATGGCAGCCGCACCTGGTCGGGAGACGGCTTCGGTCAGTGAAGATCAACCCGAAAT
ACCTCAACAGGCTGAAGTATGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	78.674	98.3	0.773
recA	Bacillus subtilis subsp. subtilis str. 168	73.846	92.068	0.68
recA	Streptococcus mutans UA159	67.63	98.017	0.663
recA	Streptococcus mitis NCTC 12261	67.63	98.017	0.663
recA	Streptococcus mitis SK321	67.63	98.017	0.663
recA	Streptococcus pyogenes NZ131	70.303	93.484	0.657
recA	Streptococcus pneumoniae Rx1	69.184	93.768	0.649
recA	Streptococcus pneumoniae D39	69.184	93.768	0.649
recA	Streptococcus pneumoniae R6	69.184	93.768	0.649
recA	Streptococcus pneumoniae TIGR4	69.184	93.768	0.649
recA	Lactococcus lactis subsp. cremoris KW2	68.58	93.768	0.643
recA	Ralstonia pseudosolanacearum GMI1000	65.176	88.669	0.578
recA	Neisseria gonorrhoeae MS11	62.08	92.635	0.575
recA	Neisseria gonorrhoeae MS11	62.08	92.635	0.575
recA	Neisseria gonorrhoeae strain FA1090	62.08	92.635	0.575
recA	Acinetobacter baylyi ADP1	58.43	97.45	0.569
recA	Pseudomonas stutzeri DSM 10701	58.235	96.317	0.561
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.991	91.501	0.558
recA	Acinetobacter baumannii D1279779	61.059	90.935	0.555
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.716	92.635	0.544
recA	Glaesserella parasuis strain SC1401	54.545	99.717	0.544
recA	Helicobacter pylori 26695	57.879	93.484	0.541
recA	Helicobacter pylori strain NCTC11637	57.879	93.484	0.541
recA	Vibrio cholerae O1 biovar El Tor strain E7946	58.879	90.935	0.535
recA	Vibrio cholerae strain A1552	58.879	90.935	0.535
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.963	92.635	0.518