Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   FGK97_RS09180 Genome accession   NZ_LR594037
Coordinates   1812914..1814059 (-) Length   381 a.a.
NCBI ID   WP_021002199.1    Uniprot ID   A0AAP6BQJ6
Organism   Streptococcus anginosus strain NCTC11064     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1807914..1819059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK97_RS09145 (NCTC11064_01882) - 1808378..1809619 (-) 1242 WP_021002196.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  FGK97_RS09150 (NCTC11064_01883) - 1809819..1810130 (-) 312 WP_003027765.1 DUF1292 domain-containing protein -
  FGK97_RS09155 (NCTC11064_01884) ruvX 1810147..1810566 (-) 420 WP_003026628.1 Holliday junction resolvase RuvX -
  FGK97_RS09160 - 1810566..1810832 (-) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  FGK97_RS09165 (NCTC11064_01886) - 1811113..1811670 (-) 558 WP_003026633.1 SP0191 family lipoprotein -
  FGK97_RS09170 (NCTC11064_01887) - 1811774..1812343 (-) 570 WP_003026634.1 SP0191 family lipoprotein -
  FGK97_RS09175 (NCTC11064_01888) spx 1812429..1812827 (-) 399 WP_003026638.1 transcriptional regulator Spx -
  FGK97_RS09180 (NCTC11064_01889) recA 1812914..1814059 (-) 1146 WP_021002199.1 recombinase RecA Machinery gene
  FGK97_RS09185 (NCTC11064_01890) cinA 1814104..1815375 (-) 1272 WP_021002200.1 competence/damage-inducible protein A Machinery gene
  FGK97_RS09195 - 1815976..1816396 (+) 421 Protein_1771 EamA family transporter -
  FGK97_RS09200 (NCTC11064_01892) - 1816499..1817077 (-) 579 WP_021002201.1 DNA-3-methyladenine glycosylase I -
  FGK97_RS09205 (NCTC11064_01893) ruvA 1817088..1817678 (-) 591 WP_021002202.1 Holliday junction branch migration protein RuvA -
  FGK97_RS09210 (NCTC11064_01894) - 1817840..1818349 (+) 510 WP_003026648.1 helix-turn-helix domain-containing protein -

Sequence


Protein


Download         Length: 381 a.a.        Molecular weight: 41297.94 Da        Isoelectric Point: 4.9241

>NTDB_id=1127444 FGK97_RS09180 WP_021002199.1 1812914..1814059(-) (recA) [Streptococcus anginosus strain NCTC11064]
MAKKQKKLEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAIDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNAEATKSTNKVEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1146 bp        

>NTDB_id=1127444 FGK97_RS09180 WP_021002199.1 1812914..1814059(-) (recA) [Streptococcus anginosus strain NCTC11064]
ATGGCGAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCGCTAGACACTGCACT
TAAAAATATTGAAAAAGATTTTGGTAAGGGAGCAATTATGCGCCTAGGTGAGCGTGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGTTTGGCATTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCGGTGGCGCAGGCTCAAAAAGAAGGCGGTATTGCAGCTTTTATTGA
TGCAGAACACGCTCTTGATCCAGCTTATGCGCAGGCTCTTGGGGTTAATATTGATGAACTCTTACTTTCTCAACCTGACT
CAGGCGAGCAAGGCCTTGAAATTGCTGGTAAATTGATTGACTCTGGTGCGATAGATTTGGTAGTTATTGACTCCGTGGCC
GCCCTCGTACCGCGTGCTGAAATTGACGGAGACATTGGAGATAGCCACGTTGGCTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATTAACAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCGTCTGTTCGTTTGGATGTTCGCGGA
AATACCCAAATCAAGGGAACTGGTGATGAAAAAGATACCAATGTTGGTAAGGAAACTAAGATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGTGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTACGGTTTGAT
TGAGGATGATGCTGAAGATGAAAAAAATGCAGAAGCAACCAAATCAACAAACAAAGTAGAGGAAGTCACACTAGATTTGG
ATGACGCGATTGAGATTGAGGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

89.267

100

0.895

  recA Streptococcus pneumoniae R6

87.565

100

0.887

  recA Streptococcus pneumoniae Rx1

87.565

100

0.887

  recA Streptococcus pneumoniae D39

87.565

100

0.887

  recA Streptococcus pneumoniae TIGR4

87.565

100

0.887

  recA Streptococcus mitis SK321

88.189

100

0.882

  recA Streptococcus mutans UA159

86.423

100

0.869

  recA Streptococcus pyogenes NZ131

86.089

100

0.861

  recA Lactococcus lactis subsp. cremoris KW2

77.874

91.339

0.711

  recA Latilactobacillus sakei subsp. sakei 23K

65.746

95.013

0.625

  recA Bacillus subtilis subsp. subtilis str. 168

69.605

86.352

0.601

  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551

  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551

  recA Neisseria gonorrhoeae strain FA1090

60.694

90.814

0.551

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.889

85.039

0.543

  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.462

85.302

0.533

  recA Vibrio cholerae strain A1552

62.462

85.302

0.533

  recA Acinetobacter baumannii D1279779

61.846

85.302

0.528

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.79

86.352

0.525

  recA Glaesserella parasuis strain SC1401

60.923

85.302

0.52

  recA Acinetobacter baylyi ADP1

60.923

85.302

0.52

  recA Helicobacter pylori 26695

58.788

86.614

0.509

  recA Helicobacter pylori strain NCTC11637

58.788

86.614

0.509

  recA Ralstonia pseudosolanacearum GMI1000

60.568

83.202

0.504

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

57.704

86.877

0.501

  recA Pseudomonas stutzeri DSM 10701

58.462

85.302

0.499


Multiple sequence alignment