Detailed information NTG1122350

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: EL158_RS03070
• Genome accession: NZ_LR134372
• Coordinates: 614010..614249 (+)
• Length: 79 a.a.
• NCBI ID: WP_004277072.1
• Uniprot ID: A0A381DUK5
• Organism: Campylobacter upsaliensis strain NCTC11541
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 609010..619249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL158_RS03050 (NCTC11541_00627)	-	611729..612412 (+)	684	WP_027304326.1	3-methyladenine DNA glycosylase	-
EL158_RS03055 (NCTC11541_00628)	-	612409..612819 (-)	411	WP_027304325.1	PepSY-like domain-containing protein	-
EL158_RS03060 (NCTC11541_00629)	-	612913..613449 (+)	537	WP_027304324.1	rhomboid family intramembrane serine protease	-
EL158_RS03065 (NCTC11541_00630)	sixA	613446..613937 (+)	492	WP_027304323.1	phosphohistidine phosphatase SixA	-
EL158_RS03070 (NCTC11541_00631)	Cj0011c	614010..614249 (+)	240	WP_004277072.1	ComEA family DNA-binding protein	Machinery gene
EL158_RS03075 (NCTC11541_00632)	-	614295..617303 (-)	3009	WP_027304322.1	efflux RND transporter permease subunit	-
EL158_RS03080 (NCTC11541_00633)	-	617304..618047 (-)	744	WP_027304321.1	efflux RND transporter periplasmic adaptor subunit	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8974.56 Da
• Isoelectric Point: 8.5316

>NTDB_id=1122350 EL158_RS03070 WP_004277072.1 614010..614249(+) (Cj0011c) [Campylobacter upsaliensis strain NCTC11541]
MKKIFFLMFALASFLFAAVNLNTATLEELKSLKGIGETKARAILDYRKEQNFTSIEELKKVKGIGEKTFEELKDSIVVE

Nucleotide

• Length: 240 bp

>NTDB_id=1122350 EL158_RS03070 WP_004277072.1 614010..614249(+) (Cj0011c) [Campylobacter upsaliensis strain NCTC11541]
ATGAAAAAAATATTTTTCTTAATGTTTGCTTTAGCGAGTTTTTTGTTTGCGGCTGTGAATTTAAATACTGCTACGCTTGA
AGAATTAAAAAGCTTAAAAGGCATAGGAGAAACCAAGGCGAGAGCGATTTTAGATTATAGAAAAGAACAAAATTTCACAA
GTATAGAAGAGCTTAAAAAGGTTAAGGGTATAGGCGAAAAAACTTTTGAAGAATTAAAAGATTCTATCGTTGTGGAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-76)

3D structure

• AlphaFold DB: A0A381DUK5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	70.886	100	0.709
comE	Neisseria gonorrhoeae MS11	46.914	100	0.481
comE	Neisseria gonorrhoeae MS11	46.914	100	0.481
comE	Neisseria gonorrhoeae MS11	46.914	100	0.481
comE	Neisseria gonorrhoeae MS11	46.914	100	0.481
comEA	Bacillus subtilis subsp. subtilis str. 168	57.143	79.747	0.456
comEA/celA/cilE	Streptococcus mitis NCTC 12261	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus pneumoniae Rx1	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus pneumoniae D39	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus pneumoniae R6	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	54.839	78.481	0.43
comEA	Lactococcus lactis subsp. cremoris KW2	53.226	78.481	0.418
comEA/celA/cilE	Streptococcus mitis SK321	53.226	78.481	0.418
comEA	Latilactobacillus sakei subsp. sakei 23K	50.794	79.747	0.405
comEA	Legionella pneumophila strain ERS1305867	48.485	83.544	0.405
comEA	Legionella pneumophila str. Paris	48.485	83.544	0.405
comEA	Staphylococcus aureus MW2	57.143	70.886	0.405
comEA	Staphylococcus aureus N315	57.143	70.886	0.405
comEA	Vibrio cholerae C6706	58.491	67.089	0.392
comEA	Vibrio cholerae strain A1552	58.491	67.089	0.392
comE1/comEA	Haemophilus influenzae Rd KW20	50.82	77.215	0.392
comEA	Vibrio parahaemolyticus RIMD 2210633	50	78.481	0.392
comEA/comE1	Glaesserella parasuis strain SC1401	49.206	79.747	0.392
comEA	Acinetobacter baumannii D1279779	46.032	79.747	0.367
comEA	Acinetobacter baylyi ADP1	47.541	77.215	0.367
comEA	Vibrio campbellii strain DS40M4	46.774	78.481	0.367