Detailed information NTG1115016

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BN2297_RS23080
• Genome accession: NZ_LN879547
• Coordinates: 5077755..5078864 (-)
• Length: 369 a.a.
• NCBI ID: WP_057094139.1
• Uniprot ID: A0A1Y1J6U0
• Organism: Comamonas thiooxydans isolate C19
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5072755..5083864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BN2297_RS23060	argC	5074220..5075152 (+)	933	WP_057094131.1	N-acetyl-gamma-glutamyl-phosphate reductase	-
BN2297_RS23065	yddG	5075353..5076273 (+)	921	WP_057094133.1	aromatic amino acid DMT transporter YddG	-
BN2297_RS23070	-	5076298..5077032 (-)	735	WP_057094135.1	hypothetical protein	-
BN2297_RS23075	recX	5077095..5077571 (-)	477	WP_057094137.1	recombination regulator RecX	-
BN2297_RS23080	recA	5077755..5078864 (-)	1110	WP_057094139.1	recombinase RecA	Machinery gene
BN2297_RS23085	-	5079003..5079494 (+)	492	WP_012840368.1	MarR family winged helix-turn-helix transcriptional regulator	-
BN2297_RS23090	-	5079621..5080298 (+)	678	WP_003064757.1	response regulator transcription factor	-
BN2297_RS23095	-	5080409..5081851 (+)	1443	WP_003064759.1	sensor histidine kinase	-
BN2297_RS23100	-	5082072..5083049 (+)	978	WP_057094141.1	Bug family tripartite tricarboxylate transporter substrate binding protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 39075.91 Da
• Isoelectric Point: 5.3847

>NTDB_id=1115016 BN2297_RS23080 WP_057094139.1 5077755..5078864(-) (recA) [Comamonas thiooxydans isolate C19]
MNAIAKTNDANSEKAKALAAALAQIEKQFGKGTIMKLGEGEAIEDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPESSG
KTTLTLQVIAEMQKQGGTCAFIDAEHALDTSYAQKLGVNLSDVLISQPDTGEQALEICDSLVRSGAVDLIVIDSVAALTP
KAEIEGEMGDALPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGTI
KKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEILDMGVNAKILEKSGAWYAYNGEKIGQGRDNSREFLRE
NPALAIEIENKVRDSLGIKLLPVDGAAAAEAKPAKGGKGKVDKDGVIEG

Nucleotide

• Length: 1110 bp

>NTDB_id=1115016 BN2297_RS23080 WP_057094139.1 5077755..5078864(-) (recA) [Comamonas thiooxydans isolate C19]
ATGAACGCCATCGCCAAGACCAACGACGCCAACAGCGAAAAAGCCAAAGCCTTGGCTGCCGCCCTGGCCCAGATCGAAAA
GCAGTTCGGCAAGGGCACCATCATGAAGCTCGGTGAAGGTGAAGCCATCGAAGACATTCAGGTCGTTTCCACCGGCTCCC
TGGGTCTGGACATCGCGCTGGGCGTAGGTGGTCTGCCCCGCGGCCGCGTGATCGAAATCTACGGTCCCGAATCCTCGGGC
AAGACCACGCTGACGCTGCAGGTCATTGCCGAGATGCAAAAGCAGGGCGGCACCTGCGCCTTTATCGACGCCGAACATGC
GCTGGACACCAGCTATGCCCAGAAGCTGGGCGTGAACCTCAGCGACGTGCTGATCAGCCAGCCCGACACCGGTGAGCAGG
CTCTGGAAATCTGCGACAGTCTGGTGCGTTCGGGTGCCGTGGACCTGATCGTCATTGACTCGGTGGCCGCATTGACGCCC
AAGGCCGAAATCGAAGGCGAGATGGGCGACGCCCTGCCCGGCCTGCAGGCCCGTCTGATGAGCCAGGCCCTGCGCAAGCT
GACGGCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCT
CGCCCGAGACCACCACCGGCGGCAATGCGTTGAAGTTCTATGCCTCCGTGCGTCTGGATATCCGCCGCACCGGCACCATC
AAGAAGGGCGACGAGGCCATCGGCAACGAAACCAAGGTCAAGGTCGTGAAGAACAAGGTCTCGCCCCCCTTCAAGACGGC
AGAGTTCGACATCCTGTTTGGCGAGGGCATCAGCCGCGAAGGCGAGATCCTGGACATGGGCGTGAATGCCAAGATTCTGG
AAAAGAGCGGTGCCTGGTATGCCTACAACGGCGAAAAAATCGGCCAGGGCCGCGACAACTCGCGCGAGTTCCTGCGCGAA
AACCCCGCGCTGGCCATCGAAATCGAAAACAAGGTGCGCGATAGCCTGGGCATCAAGCTGCTGCCTGTGGACGGTGCTGC
GGCTGCCGAAGCCAAGCCTGCCAAGGGCGGCAAGGGCAAGGTGGACAAGGACGGAGTGATTGAAGGCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (16-278)

3D structure

• AlphaFold DB: A0A1Y1J6U0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	83.758	85.095	0.713
recA	Neisseria gonorrhoeae strain FA1090	69.643	91.057	0.634
recA	Neisseria gonorrhoeae MS11	69.643	91.057	0.634
recA	Neisseria gonorrhoeae MS11	69.643	91.057	0.634
recA	Pseudomonas stutzeri DSM 10701	71.472	88.347	0.631
recA	Glaesserella parasuis strain SC1401	71.296	87.805	0.626
recA	Acinetobacter baylyi ADP1	69.632	88.347	0.615
recA	Acinetobacter baumannii D1279779	69.632	88.347	0.615
recA	Vibrio cholerae strain A1552	69.632	88.347	0.615
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.632	88.347	0.615
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.082	92.683	0.612
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.667	89.431	0.596
recA	Bacillus subtilis subsp. subtilis str. 168	64.22	88.618	0.569
recA	Helicobacter pylori strain NCTC11637	64.024	88.889	0.569
recA	Helicobacter pylori 26695	64.024	88.889	0.569
recA	Streptococcus mutans UA159	57.5	97.561	0.561
recA	Latilactobacillus sakei subsp. sakei 23K	62.162	90.244	0.561
recA	Streptococcus mitis SK321	59.42	93.496	0.556
recA	Lactococcus lactis subsp. cremoris KW2	60.714	91.057	0.553
recA	Streptococcus mitis NCTC 12261	59.13	93.496	0.553
recA	Streptococcus pneumoniae Rx1	59.184	92.954	0.55
recA	Streptococcus pneumoniae D39	59.184	92.954	0.55
recA	Streptococcus pneumoniae R6	59.184	92.954	0.55
recA	Streptococcus pneumoniae TIGR4	59.184	92.954	0.55
recA	Streptococcus pyogenes NZ131	60.597	90.786	0.55
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60	89.431	0.537