Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | CCOS191_RS20685 | Genome accession | NZ_LN847264 |
| Coordinates | 4646822..4647898 (-) | Length | 358 a.a. |
| NCBI ID | WP_028690616.1 | Uniprot ID | A0A1H9AD33 |
| Organism | Pseudomonas sp. CCOS 191 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 4641017..4681169 | 4646822..4647898 | within | 0 |
Gene organization within MGE regions
Location: 4641017..4681169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCOS191_RS20645 (CCOS191_4099) | finR | 4641017..4641943 (+) | 927 | WP_023631043.1 | LysR family transcriptional regulator FinR | - |
| CCOS191_RS20650 (CCOS191_4100) | - | 4641947..4642312 (-) | 366 | WP_023631044.1 | diacylglycerol kinase | - |
| CCOS191_RS20655 (CCOS191_4101) | erdR | 4642389..4643039 (-) | 651 | WP_023631045.1 | response regulator transcription factor ErdR | - |
| CCOS191_RS20660 (CCOS191_4102) | - | 4643297..4644007 (-) | 711 | WP_046856782.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| CCOS191_RS20665 (CCOS191_4103) | - | 4644222..4644641 (+) | 420 | WP_046856783.1 | quorum-sensing-regulated virulence factor family protein | - |
| CCOS191_RS20670 (CCOS191_4104) | - | 4644643..4644849 (-) | 207 | WP_046857890.1 | hypothetical protein | - |
| CCOS191_RS20675 (CCOS191_4105) | - | 4645154..4646272 (+) | 1119 | WP_046856784.1 | LOG family protein | - |
| CCOS191_RS20680 (CCOS191_4106) | recX | 4646342..4646812 (-) | 471 | WP_046856785.1 | recombination regulator RecX | - |
| CCOS191_RS20685 (CCOS191_4107) | recA | 4646822..4647898 (-) | 1077 | WP_028690616.1 | recombinase RecA | Machinery gene |
| CCOS191_RS20690 (CCOS191_4108) | - | 4648003..4648485 (-) | 483 | WP_046856786.1 | nicotinamide-nucleotide amidohydrolase family protein | - |
| CCOS191_RS20695 (CCOS191_4109) | - | 4648545..4649006 (-) | 462 | WP_046857891.1 | lysis system i-spanin subunit Rz | - |
| CCOS191_RS20700 (CCOS191_4110) | - | 4649039..4649590 (-) | 552 | WP_046856787.1 | glycoside hydrolase family 19 protein | - |
| CCOS191_RS20705 (CCOS191_4111) | - | 4649577..4649786 (-) | 210 | WP_046856788.1 | Com family DNA-binding transcriptional regulator | - |
| CCOS191_RS20710 (CCOS191_4112) | - | 4649879..4650913 (-) | 1035 | WP_046856789.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| CCOS191_RS20715 (CCOS191_4113) | - | 4650930..4651136 (-) | 207 | WP_046856790.1 | tail protein X | - |
| CCOS191_RS20720 (CCOS191_4114) | - | 4651111..4651956 (-) | 846 | WP_046856791.1 | phage tail protein | - |
| CCOS191_RS28065 (CCOS191_4115) | - | 4651966..4654260 (-) | 2295 | WP_046856792.1 | hypothetical protein | - |
| CCOS191_RS20730 (CCOS191_4116) | - | 4654386..4654688 (-) | 303 | WP_046856793.1 | phage tail assembly protein | - |
| CCOS191_RS20735 (CCOS191_4117) | - | 4654701..4655210 (-) | 510 | WP_023628885.1 | phage major tail tube protein | - |
| CCOS191_RS20740 (CCOS191_4118) | - | 4655224..4656390 (-) | 1167 | WP_046856794.1 | phage tail sheath family protein | - |
| CCOS191_RS27665 | - | 4656469..4656897 (-) | 429 | WP_046856795.1 | phage tail assembly chaperone | - |
| CCOS191_RS28480 | - | 4658262..4659353 (-) | 1092 | Protein_4173 | phage tail protein | - |
| CCOS191_RS20755 (CCOS191_4120) | - | 4659346..4659954 (-) | 609 | WP_046856796.1 | phage tail protein I | - |
| CCOS191_RS20760 (CCOS191_4121) | - | 4659956..4660837 (-) | 882 | WP_046856797.1 | baseplate J/gp47 family protein | - |
| CCOS191_RS20765 (CCOS191_4122) | - | 4660834..4661160 (-) | 327 | WP_046856798.1 | GPW/gp25 family protein | - |
| CCOS191_RS20770 (CCOS191_4123) | - | 4661265..4662017 (-) | 753 | WP_046856799.1 | hypothetical protein | - |
| CCOS191_RS20775 (CCOS191_4124) | - | 4662019..4662420 (-) | 402 | WP_046856800.1 | hypothetical protein | - |
| CCOS191_RS20780 (CCOS191_4125) | - | 4662472..4663686 (-) | 1215 | WP_046856801.1 | tail fiber assembly protein | - |
| CCOS191_RS20785 (CCOS191_4126) | - | 4663816..4664523 (-) | 708 | WP_046856802.1 | hypothetical protein | - |
| CCOS191_RS20790 (CCOS191_4127) | - | 4664523..4664819 (-) | 297 | WP_156177672.1 | hypothetical protein | - |
| CCOS191_RS20795 (CCOS191_4128) | - | 4664864..4665421 (-) | 558 | WP_046856804.1 | phage baseplate assembly protein V | - |
| CCOS191_RS20800 (CCOS191_4129) | - | 4665418..4665915 (-) | 498 | WP_046856805.1 | hypothetical protein | - |
| CCOS191_RS20805 (CCOS191_4130) | - | 4665945..4666487 (-) | 543 | WP_046856806.1 | tail fiber assembly protein | - |
| CCOS191_RS20810 (CCOS191_4131) | - | 4666490..4667101 (-) | 612 | WP_046856807.1 | hypothetical protein | - |
| CCOS191_RS20815 (CCOS191_4132) | - | 4667188..4667865 (-) | 678 | WP_046856808.1 | hypothetical protein | - |
| CCOS191_RS20820 (CCOS191_4133) | - | 4667865..4668188 (-) | 324 | WP_156177675.1 | hypothetical protein | - |
| CCOS191_RS20825 (CCOS191_4134) | - | 4668204..4672541 (-) | 4338 | WP_082120474.1 | phage tail protein | - |
| CCOS191_RS20830 (CCOS191_4135) | - | 4672646..4673260 (-) | 615 | WP_046856810.1 | tail assembly protein | - |
| CCOS191_RS20835 (CCOS191_4136) | - | 4673325..4673915 (-) | 591 | WP_046856811.1 | tail assembly protein | - |
| CCOS191_RS20840 (CCOS191_4137) | - | 4673956..4674720 (-) | 765 | WP_046856812.1 | C40 family peptidase | - |
| CCOS191_RS20845 (CCOS191_4138) | - | 4674724..4675461 (-) | 738 | WP_046856813.1 | phage minor tail protein L | - |
| CCOS191_RS20850 (CCOS191_4139) | - | 4675477..4675809 (-) | 333 | WP_046856814.1 | phage tail protein | - |
| CCOS191_RS20855 (CCOS191_4140) | - | 4675826..4677091 (-) | 1266 | WP_046856815.1 | phage tail tape measure protein | - |
| CCOS191_RS20860 (CCOS191_4141) | - | 4677158..4677412 (-) | 255 | WP_046856816.1 | hypothetical protein | - |
| CCOS191_RS20865 (CCOS191_4142) | - | 4677442..4677792 (-) | 351 | WP_046856817.1 | phage tail assembly chaperone family protein, TAC | - |
| CCOS191_RS20870 (CCOS191_4143) | - | 4677807..4678298 (-) | 492 | WP_046856818.1 | phage tail tube protein | - |
| CCOS191_RS20875 (CCOS191_4144) | - | 4678383..4678565 (-) | 183 | WP_046856819.1 | hypothetical protein | - |
| CCOS191_RS20880 (CCOS191_4145) | - | 4678580..4678933 (-) | 354 | WP_046856820.1 | phage holin family protein | - |
| CCOS191_RS20885 (CCOS191_4146) | - | 4678963..4679301 (-) | 339 | WP_052752653.1 | hypothetical protein | - |
| CCOS191_RS20890 (CCOS191_4147) | - | 4679302..4679955 (-) | 654 | WP_046856821.1 | hypothetical protein | - |
| CCOS191_RS20895 (CCOS191_4149) | - | 4680423..4681169 (-) | 747 | WP_046856822.1 | XRE family transcriptional regulator | - |
Sequence
Protein
Download Length: 358 a.a. Molecular weight: 37744.04 Da Isoelectric Point: 5.3078
>NTDB_id=1114534 CCOS191_RS20685 WP_028690616.1 4646822..4647898(-) (recA) [Pseudomonas sp. CCOS 191]
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYSYQGNKIGQGKANAAKYLQENPAIGSEIEK
QIRDKLLTAGAAAAAAAAAKAGAAEADADDLADADAGY
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYSYQGNKIGQGKANAAKYLQENPAIGSEIEK
QIRDKLLTAGAAAAAAAAAKAGAAEADADDLADADAGY
Nucleotide
Download Length: 1077 bp
>NTDB_id=1114534 CCOS191_RS20685 WP_028690616.1 4646822..4647898(-) (recA) [Pseudomonas sp. CCOS 191]
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGCAAAGGCGCGGTCATGCG
CATGGGCGACCACGAGCGCCAGGCGATCCCCGCCATCTCCACCGGTTCGCTGGGCCTGGACATCGCCCTGGGCATTGGCG
GCCTGCCCAAGGGCCGTATCGTCGAGATCTACGGCCCGGAATCCTCGGGTAAAACCACGCTGACCCTGTCGGTCATCGCC
GAAGCCCAGAAGAACGGCGCCACCTGCGCCTTCGTCGACGCCGAGCACGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGACGACCTGCTGGTCTCGCAGCCGGACACCGGCGAGCAGGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCGTCGACGTGATCATCGTCGACTCCGTGGCCGCGCTGGTGCCCAAGGCCGAGATCGAAGGCGAGATGGGCGAC
ATGCACGTCGGCCTGCAGGCCCGTCTGATGTCCCAGGCGCTGCGCAAGATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGCGTGATGTTCGGTAGCCCGGAAACCACCACCGGCGGTAACGCCT
TGAAGTTCTACGCCTCCGTGCGCCTGGACATTCGCCGTACCGGCGCGGTCAAGGAAGGCGATGAGGTGGTCGGTAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCGCCGTTCCGTCAGGCCGAGTTCCAGATCCTCTACGGCAAGGGCAT
CTACCGCAACGGCGAAATCATCGACCTGGGTGTTTCCCAGGGCCTGGTTGAAAAGTCCGGTGCCTGGTACAGCTACCAGG
GCAACAAGATCGGTCAGGGCAAGGCCAACGCCGCCAAGTACCTGCAAGAGAACCCGGCCATTGGTAGCGAGATCGAGAAG
CAGATTCGCGACAAGCTGCTGACCGCCGGTGCCGCCGCCGCTGCAGCAGCGGCCGCCAAGGCCGGTGCCGCCGAAGCCGA
TGCCGATGATCTGGCTGACGCCGACGCCGGTTATTGA
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGCAAAGGCGCGGTCATGCG
CATGGGCGACCACGAGCGCCAGGCGATCCCCGCCATCTCCACCGGTTCGCTGGGCCTGGACATCGCCCTGGGCATTGGCG
GCCTGCCCAAGGGCCGTATCGTCGAGATCTACGGCCCGGAATCCTCGGGTAAAACCACGCTGACCCTGTCGGTCATCGCC
GAAGCCCAGAAGAACGGCGCCACCTGCGCCTTCGTCGACGCCGAGCACGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGACGACCTGCTGGTCTCGCAGCCGGACACCGGCGAGCAGGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCGTCGACGTGATCATCGTCGACTCCGTGGCCGCGCTGGTGCCCAAGGCCGAGATCGAAGGCGAGATGGGCGAC
ATGCACGTCGGCCTGCAGGCCCGTCTGATGTCCCAGGCGCTGCGCAAGATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGCGTGATGTTCGGTAGCCCGGAAACCACCACCGGCGGTAACGCCT
TGAAGTTCTACGCCTCCGTGCGCCTGGACATTCGCCGTACCGGCGCGGTCAAGGAAGGCGATGAGGTGGTCGGTAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCGCCGTTCCGTCAGGCCGAGTTCCAGATCCTCTACGGCAAGGGCAT
CTACCGCAACGGCGAAATCATCGACCTGGGTGTTTCCCAGGGCCTGGTTGAAAAGTCCGGTGCCTGGTACAGCTACCAGG
GCAACAAGATCGGTCAGGGCAAGGCCAACGCCGCCAAGTACCTGCAAGAGAACCCGGCCATTGGTAGCGAGATCGAGAAG
CAGATTCGCGACAAGCTGCTGACCGCCGGTGCCGCCGCCGCTGCAGCAGCGGCCGCCAAGGCCGGTGCCGCCGAAGCCGA
TGCCGATGATCTGGCTGACGCCGACGCCGGTTATTGA
Similar proteins
Only experimentally validated proteins are listed.