Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   LFA_RS08725 Genome accession   NZ_LN614827
Coordinates   2155431..2156471 (-) Length   346 a.a.
NCBI ID   WP_045095853.1    Uniprot ID   A0A098G755
Organism   Legionella fallonii LLAP-10     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2150431..2161471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LFA_RS08700 (LFA_1939) - 2150646..2151086 (+) 441 WP_045095848.1 Hsp20/alpha crystallin family protein -
  LFA_RS08705 (LFA_1940) - 2151301..2151498 (-) 198 WP_045095849.1 Thivi_2564 family membrane protein -
  LFA_RS08710 (LFA_1941) mscL 2151683..2152072 (-) 390 WP_045095850.1 large-conductance mechanosensitive channel protein MscL -
  LFA_RS08715 (LFA_1942) alaS 2152350..2154932 (-) 2583 WP_045095851.1 alanine--tRNA ligase -
  LFA_RS08720 (LFA_1943) recX 2154994..2155431 (-) 438 WP_045095852.1 recombination regulator RecX -
  LFA_RS08725 (LFA_1944) recA 2155431..2156471 (-) 1041 WP_045095853.1 recombinase RecA Machinery gene
  LFA_RS08730 (LFA_1945) - 2156537..2157031 (-) 495 WP_045095854.1 CinA family protein -
  LFA_RS19840 - 2157211..2157366 (-) 156 WP_157010329.1 hypothetical protein -
  LFA_RS08735 (LFA_1947) mutS 2157572..2160109 (+) 2538 WP_045095855.1 DNA mismatch repair protein MutS -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37818.43 Da        Isoelectric Point: 4.9736

>NTDB_id=1113618 LFA_RS08725 WP_045095853.1 2155431..2156471(-) (recA) [Legionella fallonii LLAP-10]
MEENKQKALAAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQVI
AECQKMGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQALEITDMLVRSSAVDVIIIDSVAALTPKAEIEGEMG
DSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGEEILGS
ETRVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGKDNVRLYLKENPQVAETLE
RQIRSELLENKLPMLATTDEEDLETM

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=1113618 LFA_RS08725 WP_045095853.1 2155431..2156471(-) (recA) [Legionella fallonii LLAP-10]
ATGGAAGAGAATAAACAAAAAGCACTAGCAGCGGCTCTTTCGCAAATCGAACGCCAATTTGGCAAAGGTTCGGTAATGCG
TATGGGTGATAGTACAGTATCTCGTGATATAGAAGCTATTTCTACGGGGTCATTAGGTCTTGATATCGCACTAGGCATTG
GCGGTTTACCTAAAGGGCGTGTCGTTGAAATATATGGTCCTGAATCCTCTGGTAAAACTACATTAACACTTCAAGTCATT
GCTGAATGCCAAAAAATGGGTGGGACAGCAGCATTTATTGATGCGGAACATGCTTTAGATCCAAGCTATGCGCAAAAGCT
AGGGGTGAATGTTGATGAGTTGTTGGTTTCTCAGCCTGATACAGGGGAGCAAGCTCTGGAAATCACTGATATGCTGGTGC
GTTCTTCTGCCGTTGATGTAATCATCATTGACTCGGTCGCTGCTTTAACACCTAAGGCTGAAATTGAAGGGGAAATGGGT
GACTCTCATGTTGGTTTACAAGCCCGATTGATGTCACAGGCTTTACGTAAATTAACAGCAAATATTAAACGTTCTAATAC
TTTGGTTATTTTTATTAACCAAATTAGGATGAAAATTGGTGTTATGTTTGGTAGCCCAGAAACAACAACAGGCGGTAATG
CACTTAAGTTTTATGCATCGGTTCGTTTGGATATTCGCCGCATAGGATCAATTAAGAAGGGTGAAGAAATATTAGGTAGT
GAGACACGTGTGAAAGTAGTTAAAAATAAAGTGGCTCCTCCTTTCAAGATGACTGAATTTGATATTTTATATAATGAAGG
TATTTCCCGCGAAAGTGAGATCATCAATTTAGGTGTTCAATTGAATCTGATTGAAAAATCAGGAGCTTGGTATAGTTACA
AGCAAGAAAAAATTGGTCAAGGTAAAGATAATGTCCGCCTTTATCTCAAAGAAAACCCACAAGTGGCAGAAACACTTGAG
CGGCAGATTAGGAGTGAATTGCTAGAAAATAAATTACCTATGCTAGCTACTACAGATGAAGAAGACTTAGAGACTATGTA
A

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A098G755

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Pseudomonas stutzeri DSM 10701

76.385

99.133

0.757
  recA Acinetobacter baylyi ADP1

72.384

99.422

0.72
  recA Acinetobacter baumannii D1279779

75

94.798

0.711
  recA Glaesserella parasuis strain SC1401

70.893

100

0.711
  recA Vibrio cholerae strain A1552

73.171

94.798

0.694
  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.171

94.798

0.694
  recA Ralstonia pseudosolanacearum GMI1000

72.948

95.087

0.694
  recA Neisseria gonorrhoeae MS11

72.308

93.931

0.679
  recA Neisseria gonorrhoeae MS11

72.308

93.931

0.679
  recA Neisseria gonorrhoeae strain FA1090

72.308

93.931

0.679
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

65.455

95.376

0.624
  recA Helicobacter pylori strain NCTC11637

61.032

100

0.616
  recA Helicobacter pylori 26695

61.032

100

0.616
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

64.634

94.798

0.613
  recA Bacillus subtilis subsp. subtilis str. 168

64.798

92.775

0.601
  recA Latilactobacillus sakei subsp. sakei 23K

57.714

100

0.584
  recA Streptococcus pneumoniae D39

59.939

94.509

0.566
  recA Streptococcus pneumoniae R6

59.939

94.509

0.566
  recA Streptococcus pneumoniae TIGR4

59.939

94.509

0.566
  recA Streptococcus pneumoniae Rx1

59.939

94.509

0.566
  recA Streptococcus mitis SK321

59.633

94.509

0.564
  recA Streptococcus mitis NCTC 12261

59.327

94.509

0.561
  recA Lactococcus lactis subsp. cremoris KW2

59.385

93.931

0.558
  recA Streptococcus pyogenes NZ131

59.202

94.22

0.558
  recA Streptococcus mutans UA159

59.202

94.22

0.558
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

58.41

94.509

0.552

Multiple sequence alignment