Detailed information NTG1108635

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACOCJZ_RS06680
• Genome accession: NZ_CP184513
• Coordinates: 1315833..1316879 (-)
• Length: 348 a.a.
• NCBI ID: WP_003732286.1
• Uniprot ID: A0A3Q0NEE0
• Organism: Listeria monocytogenes strain 396044
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1310833..1321879

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCJZ_RS06660	-	1312171..1312533 (-)	363	WP_003744056.1	RicAFT regulatory complex protein RicA family protein	-
ACOCJZ_RS06665	-	1312550..1313353 (-)	804	WP_003732288.1	TIGR00282 family metallophosphoesterase	-
ACOCJZ_RS06670	-	1313359..1313856 (-)	498	WP_010990112.1	GNAT family N-acetyltransferase	-
ACOCJZ_RS06675	rny	1313970..1315532 (-)	1563	WP_003721904.1	ribonuclease Y	-
ACOCJZ_RS06680	recA	1315833..1316879 (-)	1047	WP_003732286.1	recombinase RecA	Machinery gene
ACOCJZ_RS06685	cinA	1317152..1318396 (-)	1245	WP_012951603.1	competence/damage-inducible protein A	Machinery gene
ACOCJZ_RS06690	pgsA	1318465..1319043 (-)	579	WP_003723921.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ACOCJZ_RS06695	-	1319133..1320062 (-)	930	WP_003723920.1	helix-turn-helix domain-containing protein	-
ACOCJZ_RS06700	ymfI	1320113..1320844 (-)	732	WP_015454687.1	elongation factor P 5-aminopentanone reductase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37994.08 Da
• Isoelectric Point: 4.8079

>NTDB_id=1108635 ACOCJZ_RS06680 WP_003732286.1 1315833..1316879(-) (recA) [Listeria monocytogenes strain 396044]
MNDRQAALDQALKQIEKQFGKGSIMKLGEHSDQNISTISSGSLALDIALGVGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQAQGGTAAFIDAEHALDPAYAKNLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDA
HVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEITPGGRALKFYSTVRLEVRRAEQLKQGTDVMGNKT
KIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMAAEVDVINKSGSWYSYKEERIGQGRENAKQYLKEHTDIRDEISKR
VREEYEIDGSSKEPLDEKEETLSLLDDE

Nucleotide

• Length: 1047 bp

>NTDB_id=1108635 ACOCJZ_RS06680 WP_003732286.1 1315833..1316879(-) (recA) [Listeria monocytogenes strain 396044]
GTGAATGATCGTCAAGCGGCATTAGACCAAGCTTTAAAACAAATTGAAAAACAATTCGGTAAAGGCTCCATTATGAAATT
AGGGGAACATTCAGATCAAAATATATCTACTATTTCTAGTGGTTCATTAGCGTTAGATATTGCTTTAGGAGTTGGCGGAT
ACCCTCGTGGACGTATTATCGAAGTATACGGACCAGAGAGTTCCGGTAAAACAACTGTTGCGCTTCATGCAATTGCGGAA
GTACAAGCACAAGGCGGAACAGCAGCATTTATCGATGCTGAGCATGCGTTGGATCCGGCTTATGCTAAAAACCTAGGTGT
AAATATTGATGAATTATTACTATCTCAACCAGATACAGGAGAACAAGCTTTAGAGATTGCTGAAGCTTTAGTTAGAAGTG
GTGCAGTTGATATGTTAGTAATTGACTCCGTTGCAGCACTTGTACCACGTGCTGAAATCGAAGGCGAGATGGGCGATGCT
CATGTTGGATTACAAGCACGTTTAATGTCCCAAGCATTGCGTAAACTTTCTGGTGTTATTAATAAATCAAAAACCATTGC
TATTTTCATTAACCAAATTCGTGAAAAAGTTGGTGTTATGTTTGGTAACCCAGAAATCACACCAGGTGGACGTGCGCTTA
AATTCTATTCTACTGTACGTTTAGAAGTAAGACGTGCGGAACAACTGAAGCAAGGTACAGATGTAATGGGTAACAAAACA
AAAATCAAAGTTGTAAAAAATAAAGTAGCGCCACCATTCCGTATTGCCGAAGTAGATATTATGTATGGTGAAGGTATTTC
GCGTGAAGGTGAGCTTGTTGATATGGCTGCTGAAGTGGATGTAATCAATAAGAGTGGTTCGTGGTATTCTTATAAAGAAG
AACGCATCGGTCAAGGCCGTGAGAATGCAAAACAATATCTGAAAGAACACACAGATATTCGTGATGAGATTTCTAAGCGC
GTTCGTGAAGAATATGAAATTGATGGAAGCAGCAAAGAGCCTCTTGACGAAAAAGAAGAAACATTAAGTTTACTAGATGA
TGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A3Q0NEE0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	84.146	94.253	0.793
recA	Latilactobacillus sakei subsp. sakei 23K	77.011	100	0.77
recA	Streptococcus pneumoniae D39	70.783	95.402	0.675
recA	Streptococcus pneumoniae R6	70.783	95.402	0.675
recA	Streptococcus pneumoniae TIGR4	70.783	95.402	0.675
recA	Streptococcus pneumoniae Rx1	70.783	95.402	0.675
recA	Streptococcus mitis SK321	66.762	100	0.67
recA	Streptococcus mitis NCTC 12261	69.88	95.402	0.667
recA	Streptococcus pyogenes NZ131	69.817	94.253	0.658
recA	Streptococcus mutans UA159	68.902	94.253	0.649
recA	Lactococcus lactis subsp. cremoris KW2	68.502	93.966	0.644
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.29	97.989	0.601
recA	Neisseria gonorrhoeae strain FA1090	64.596	92.529	0.598
recA	Neisseria gonorrhoeae MS11	64.596	92.529	0.598
recA	Neisseria gonorrhoeae MS11	64.596	92.529	0.598
recA	Helicobacter pylori 26695	59.942	98.276	0.589
recA	Helicobacter pylori strain NCTC11637	59.942	98.276	0.589
recA	Acinetobacter baylyi ADP1	59.249	99.425	0.589
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.863	92.241	0.589
recA	Vibrio cholerae strain A1552	63.863	92.241	0.589
recA	Acinetobacter baumannii D1279779	59.475	98.563	0.586
recA	Ralstonia pseudosolanacearum GMI1000	66.019	88.793	0.586
recA	Pseudomonas stutzeri DSM 10701	62.813	91.954	0.578
recA	Glaesserella parasuis strain SC1401	63.009	91.667	0.578
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.5	91.954	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.912	95.115	0.56