Detailed information NTG0110835

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ID09_RS02030
• Genome accession: NZ_CP008921
• Coordinates: 401493..403883 (+)
• Length: 796 a.a.
• NCBI ID: WP_024381717.1
• Uniprot ID: -
• Organism: Streptococcus suis 6407
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 396493..408883

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ID09_RS02010 (ID09_02035)	-	397800..398282 (-)	483	WP_004194159.1	S-ribosylhomocysteine lyase	-
ID09_RS02015 (ID09_02040)	-	398412..400025 (+)	1614	WP_011921986.1	ribonuclease Y	-
ID09_RS02020 (ID09_02045)	gmk	400185..400811 (+)	627	WP_004194155.1	guanylate kinase	-
ID09_RS02025 (ID09_02050)	rpoZ	400835..401149 (+)	315	WP_004194153.1	DNA-directed RNA polymerase subunit omega	-
ID09_RS02030 (ID09_02055)	priA	401493..403883 (+)	2391	WP_024381717.1	primosomal protein N'	Machinery gene
ID09_RS02035 (ID09_02060)	fmt	404015..404953 (+)	939	WP_011921989.1	methionyl-tRNA formyltransferase	-
ID09_RS02040 (ID09_02065)	rsmB	404940..406253 (+)	1314	WP_011921990.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
ID09_RS02045 (ID09_02070)	-	406291..407028 (+)	738	WP_004194145.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
ID09_RS02050 (ID09_02075)	pknB	407028..408680 (+)	1653	Protein_364	Stk1 family PASTA domain-containing Ser/Thr kinase	-

Sequence

Protein

• Length: 796 a.a.
• Molecular weight: 90951.86 Da
• Isoelectric Point: 6.1963

>NTDB_id=110835 ID09_RS02030 WP_024381717.1 401493..403883(+) (priA) [Streptococcus suis 6407]
MLAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGNRLIQGIVVDLIDEDDENSLQDLKELAEVLDYSPVLN
QEQFWLADQMRKSVFSYKITLLKSMLPSLLNSTYDKLLRPGLGLEMAEQISLFGDKEQIRFSDLDVTEQGKIMRLAQSGK
ILVDYVAKDKKQIKTEKWYRVCLEKLRDADISNRAKKRQQLREFLLEHSEDQLLSNLKSAYSADTLRYFQEKGYIEVWEE
EVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIGQESQTFLLQGVTGSGKTEVYLQVIDRVLKMGKTAIMLVPEISLT
PQMTNRFISRFGQQVAILHSGLSDGEKYDEWRKIEAGNAQVVVGARSAIFAPLTNLGVIIIDEEHEATYKQDSNPRYHAR
DVAKLRADYNRATLVLGSATPSLETRARASRGVYGRLTLNQRANPLARIPEVEVVDFRDYIGLQEASNFTPVLIEKIREK
LARKEQVVLMLNRRGYSSFVMCRDCGSVDQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQTCPNCQSRSIRYYGTGTQKA
YDELQELLPEARILRMDVDTTKKKGAHEDLLERFGRGEADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERT
FQLLTQVAGRAGRADKEGEVLIQTYNPNHYAIAFAKEQDYEGFYRYEMGIRKNLGYPPYYFTVGLTFSHKSEEFVVKKSY
ETVAFLRQHLTEAIQILGPTPKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQERENQDLRLIIDNEPQNMM

Nucleotide

• Length: 2391 bp

>NTDB_id=110835 ID09_RS02030 WP_024381717.1 401493..403883(+) (priA) [Streptococcus suis 6407]
ATGTTAGCACAGATTATTGTAGACGTCCCTTTGATGCAGACAGATCAAGCTTATTCTTATCGAGTTCCAGCTGAGTTGGA
AGAGGGACTCAAGGTTGGCGTGCGTGTCCATGTACCCTTTGGTAAGGGAAATCGGCTGATTCAAGGGATTGTAGTTGATT
TGATTGATGAAGATGATGAAAATAGCTTACAAGACTTGAAAGAGCTTGCCGAGGTTTTGGACTATAGTCCTGTTCTCAAT
CAAGAGCAATTTTGGTTGGCGGACCAGATGAGAAAGTCGGTCTTCTCCTATAAAATTACCCTCTTAAAATCCATGTTGCC
CAGCTTGCTCAATTCGACCTATGACAAATTGCTCCGTCCAGGGCTTGGTTTGGAAATGGCAGAGCAGATTAGTCTGTTTG
GTGATAAGGAGCAGATTCGTTTTTCTGACTTGGACGTGACAGAGCAAGGGAAAATCATGCGTCTGGCCCAGTCAGGAAAA
ATCTTGGTAGACTATGTGGCCAAGGATAAGAAGCAAATCAAGACAGAAAAATGGTACCGAGTTTGTCTGGAGAAATTACG
AGATGCAGACATTAGCAATCGAGCCAAGAAACGGCAGCAGTTAAGGGAATTTCTTCTGGAACACTCGGAAGACCAGCTTC
TTTCAAACCTAAAATCGGCCTATTCAGCTGATACGCTCCGCTATTTCCAAGAAAAAGGCTATATAGAAGTCTGGGAGGAG
GAAGTGTCGCGGACTCAGGGTGTTTTTGATAAGGTAGAAAAAACGCAGGCCTTGGATTTGAATCCAGAGCAGGCCATTGC
GGTTCGTGAGATTGTGGCCTCTATCGGTCAGGAAAGTCAGACATTTCTACTGCAAGGAGTGACTGGCTCTGGGAAGACGG
AAGTCTATCTCCAGGTTATTGATAGGGTCTTGAAAATGGGGAAAACGGCTATTATGCTAGTGCCTGAAATTTCCTTGACT
CCTCAGATGACCAATCGTTTTATTTCTCGTTTTGGCCAGCAGGTTGCGATTCTTCACTCCGGTCTGTCTGATGGAGAGAA
GTATGACGAGTGGAGAAAGATTGAGGCGGGGAATGCCCAGGTGGTTGTCGGGGCCCGTTCGGCCATTTTTGCCCCTTTGA
CAAACTTGGGTGTTATCATCATTGATGAGGAGCATGAGGCGACCTACAAGCAGGACAGCAATCCACGCTACCATGCGCGT
GATGTGGCAAAGTTGCGGGCTGATTATAATCGAGCGACCCTGGTCTTGGGGTCTGCTACGCCGAGTCTTGAAACACGGGC
TCGGGCTAGTCGAGGAGTCTATGGAAGACTGACTCTTAACCAGAGGGCCAATCCCTTAGCTCGTATTCCAGAAGTGGAAG
TTGTGGATTTCCGTGATTATATCGGTCTGCAGGAGGCTAGTAATTTTACCCCTGTTCTGATTGAAAAGATAAGAGAAAAA
TTGGCTCGTAAGGAACAGGTCGTTCTTATGTTGAATAGGCGTGGTTATTCTTCTTTTGTCATGTGTCGTGATTGTGGGAG
TGTGGACCAGTGTCCCAATTGTGATATTTCCCTTACGCTCCATATGGACACAAAAACGATGAATTGCCATTATTGTGGTT
TTCAAAAGGGGATTCCTCAGACCTGTCCAAACTGTCAAAGTCGTTCTATTCGCTATTATGGGACGGGTACGCAAAAGGCC
TACGATGAATTGCAGGAGCTTTTGCCAGAAGCTAGAATTTTGCGTATGGATGTGGATACTACCAAGAAAAAAGGTGCTCA
TGAGGACTTGCTCGAACGGTTTGGTCGAGGCGAGGCCGATATTCTTCTGGGAACTCAGATGATTGCCAAGGGCTTGGATT
TTCCAAATGTGACCCTAGTTGGGGTGCTCAATGCGGATACGGCTCTGAATTTGCCTGATTTTCGGTCTTCTGAGCGGACC
TTCCAGTTGCTAACTCAGGTAGCTGGTCGGGCTGGTCGAGCTGATAAGGAAGGGGAGGTCCTGATTCAGACCTATAACCC
CAATCATTATGCCATTGCTTTTGCCAAAGAGCAGGATTATGAAGGTTTCTATCGTTATGAGATGGGCATTCGGAAAAATC
TTGGTTATCCACCTTACTATTTTACGGTTGGTCTAACCTTTTCGCACAAGTCAGAAGAATTTGTCGTGAAAAAATCCTAT
GAAACTGTAGCCTTTCTCCGTCAACACTTAACGGAGGCTATCCAAATCTTGGGACCGACGCCCAAGCCTATTGCCAGAAC
TCATAATCTCTACCACTACCAGATCATCTTGAAATACCGGCATGAAGACCGTTTGGAAGAGGTATTGAATCAGATTTTGG
ATTGGACACAGGAGAGAGAAAATCAAGATTTGCGACTGATTATTGACAATGAACCGCAGAATATGATGTGA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (259-422)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (4-107)

• Primosomal protein N C-terminal domain (PriA_C) (698-792)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (511-536)

• Helicase conserved C-terminal domain (Helicase_C) (570-654)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	47.708	100	0.484