Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ACOAJ7_RS19380 | Genome accession | NZ_CP184249 |
| Coordinates | 4265133..4266206 (-) | Length | 357 a.a. |
| NCBI ID | WP_010285348.1 | Uniprot ID | A0A0M2EVF8 |
| Organism | Pectobacterium brasiliense strain CSR3 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 4261317..4289875 | 4265133..4266206 | within | 0 |
Gene organization within MGE regions
Location: 4261317..4289875
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOAJ7_RS19365 (ACOAJ7_19365) | csrA | 4261317..4261502 (-) | 186 | WP_005972168.1 | carbon storage regulator CsrA | - |
| ACOAJ7_RS19370 (ACOAJ7_19370) | alaS | 4261827..4264454 (-) | 2628 | WP_420064885.1 | alanine--tRNA ligase | - |
| ACOAJ7_RS19375 (ACOAJ7_19375) | recX | 4264593..4265087 (-) | 495 | WP_420064886.1 | recombination regulator RecX | - |
| ACOAJ7_RS19380 (ACOAJ7_19380) | recA | 4265133..4266206 (-) | 1074 | WP_010285348.1 | recombinase RecA | Machinery gene |
| ACOAJ7_RS19385 (ACOAJ7_19385) | pncC | 4266314..4266808 (-) | 495 | WP_180743984.1 | nicotinamide-nucleotide amidase | - |
| ACOAJ7_RS19390 (ACOAJ7_19390) | - | 4267035..4267370 (-) | 336 | WP_180743884.1 | hypothetical protein | - |
| ACOAJ7_RS19395 (ACOAJ7_19395) | - | 4267854..4268342 (+) | 489 | WP_180743885.1 | SRPBCC family protein | - |
| ACOAJ7_RS19400 (ACOAJ7_19400) | - | 4268426..4269100 (+) | 675 | WP_180743886.1 | MarC family NAAT transporter | - |
| ACOAJ7_RS19405 (ACOAJ7_19405) | - | 4269277..4270875 (+) | 1599 | WP_420064887.1 | sensor domain-containing diguanylate cyclase | - |
| ACOAJ7_RS19410 (ACOAJ7_19410) | - | 4271141..4272337 (-) | 1197 | WP_420064888.1 | MFS transporter | - |
| ACOAJ7_RS19415 (ACOAJ7_19415) | - | 4272453..4273334 (-) | 882 | WP_420064889.1 | LysR family transcriptional regulator | - |
| ACOAJ7_RS19420 (ACOAJ7_19420) | grxB | 4273550..4274185 (+) | 636 | WP_180743890.1 | glutaredoxin 2 | - |
| ACOAJ7_RS19425 (ACOAJ7_19425) | - | 4274281..4274550 (-) | 270 | WP_255434029.1 | hypothetical protein | - |
| ACOAJ7_RS19430 (ACOAJ7_19430) | - | 4274810..4274959 (-) | 150 | WP_420064890.1 | hypothetical protein | - |
| ACOAJ7_RS19435 (ACOAJ7_19435) | pvcA | 4275039..4276004 (-) | 966 | WP_420064891.1 | L-tyrosine isonitrile synthase | - |
| ACOAJ7_RS19440 (ACOAJ7_19440) | - | 4276295..4276366 (+) | 72 | WP_420066066.1 | SymE family type I addiction module toxin | - |
| ACOAJ7_RS19445 (ACOAJ7_19445) | - | 4276363..4276728 (+) | 366 | WP_420064892.1 | helix-turn-helix domain-containing protein | - |
| ACOAJ7_RS19450 (ACOAJ7_19450) | - | 4276804..4277028 (+) | 225 | WP_180746391.1 | SymE family type I addiction module toxin | - |
| ACOAJ7_RS19455 (ACOAJ7_19455) | - | 4277109..4277414 (-) | 306 | WP_420064893.1 | hypothetical protein | - |
| ACOAJ7_RS19460 (ACOAJ7_19460) | - | 4277421..4277819 (-) | 399 | WP_420064894.1 | EndoU domain-containing protein | - |
| ACOAJ7_RS19465 (ACOAJ7_19465) | - | 4278340..4278561 (-) | 222 | WP_420064895.1 | hypothetical protein | - |
| ACOAJ7_RS19470 (ACOAJ7_19470) | xerC | 4278801..4279844 (-) | 1044 | WP_420064896.1 | site-specific tyrosine recombinase XerC | - |
| ACOAJ7_RS19475 (ACOAJ7_19475) | - | 4279878..4282781 (-) | 2904 | WP_420064897.1 | CHC2 zinc finger domain-containing protein | - |
| ACOAJ7_RS19480 (ACOAJ7_19480) | - | 4282934..4283305 (+) | 372 | WP_420064898.1 | helix-turn-helix domain-containing protein | - |
| ACOAJ7_RS19485 (ACOAJ7_19485) | - | 4283385..4283609 (+) | 225 | WP_420064899.1 | SymE family type I addiction module toxin | - |
| ACOAJ7_RS19490 (ACOAJ7_19490) | - | 4283671..4283934 (-) | 264 | WP_400412058.1 | hypothetical protein | - |
| ACOAJ7_RS19495 (ACOAJ7_19495) | - | 4284910..4285131 (-) | 222 | WP_420064895.1 | hypothetical protein | - |
| ACOAJ7_RS19500 (ACOAJ7_19500) | xerC | 4285371..4286414 (-) | 1044 | WP_420064896.1 | site-specific tyrosine recombinase XerC | - |
| ACOAJ7_RS19505 (ACOAJ7_19505) | - | 4286448..4289351 (-) | 2904 | WP_420064897.1 | CHC2 zinc finger domain-containing protein | - |
| ACOAJ7_RS19510 (ACOAJ7_19510) | - | 4289504..4289875 (+) | 372 | WP_420064898.1 | helix-turn-helix domain-containing protein | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 38230.71 Da Isoelectric Point: 5.0716
>NTDB_id=1108067 ACOAJ7_RS19380 WP_010285348.1 4265133..4266206(-) (recA) [Pectobacterium brasiliense strain CSR3]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVG
SETRVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQGKANACNFLKENPAIAAEL
DKKLREMLLHKGNELTPAAAGNSHDEDEFAGEGNEEF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVG
SETRVKVVKNKVAAPFKQAEFQILYGEGINIHGELVDLGVKHKLIEKAGAWYSYNGDKIGQGKANACNFLKENPAIAAEL
DKKLREMLLHKGNELTPAAAGNSHDEDEFAGEGNEEF
Nucleotide
Download Length: 1074 bp
>NTDB_id=1108067 ACOAJ7_RS19380 WP_010285348.1 4265133..4266206(-) (recA) [Pectobacterium brasiliense strain CSR3]
ATGGCTATTGATGAGAACAAACAAAAGGCACTTGCGGCAGCACTGGGCCAAATCGAAAAGCAATTTGGTAAAGGTTCTAT
CATGCGGTTGGGCGAAGATCGCTCAATGGATGTTGAAACTATTTCTACAGGCTCCTTGTCTCTTGATATTGCTCTGGGCG
CTGGTGGTTTGCCGATGGGCCGTATCGTTGAGATTTATGGCCCGGAATCTTCCGGTAAAACAACGCTGACCTTACAGGTT
ATTGCTGCCGCTCAGCGTGAAGGCAAAACGTGTGCGTTCATTGATGCTGAGCACGCGTTGGATCCGATTTATGCGAAAAA
GCTTGGCGTAGATATCGATAATCTGCTGTGTTCTCAGCCGGATACCGGCGAGCAAGCGCTGGAAATCTGTGATGCATTAA
CGCGCTCTGGCGCGGTTGACGTTATCATCGTCGACTCCGTTGCGGCACTGACACCGAAAGCAGAAATTGAAGGTGAAATC
GGCGACTCCCACATGGGGCTGGCCGCACGTATGATGAGCCAGGCTATGCGTAAACTGGCGGGTAACCTGAAACAAGCCAA
TACGCTGCTGATTTTCATTAACCAGATTCGTATGAAAATCGGTGTGATGTTCGGTAACCCTGAAACCACTACCGGTGGTA
ACGCTCTGAAGTTTTATGCTTCTGTTCGCCTGGATATTCGTCGTACTGGTGCAATCAAGGAAGGCGAAGAGGTTGTCGGC
AGCGAAACCCGTGTGAAAGTTGTGAAGAATAAAGTGGCAGCACCGTTCAAACAGGCTGAATTCCAAATTCTGTACGGTGA
AGGTATCAATATCCACGGTGAGCTGGTCGATCTGGGTGTGAAACACAAGCTGATCGAAAAAGCGGGTGCCTGGTATAGCT
ATAACGGCGACAAGATCGGTCAGGGTAAAGCAAATGCCTGTAATTTCCTGAAAGAGAACCCGGCTATTGCTGCGGAACTG
GATAAGAAATTGCGTGAAATGCTGCTGCATAAAGGCAATGAGCTGACGCCAGCCGCCGCTGGAAATAGCCATGACGAAGA
TGAATTTGCTGGTGAAGGCAACGAAGAGTTTTAA
ATGGCTATTGATGAGAACAAACAAAAGGCACTTGCGGCAGCACTGGGCCAAATCGAAAAGCAATTTGGTAAAGGTTCTAT
CATGCGGTTGGGCGAAGATCGCTCAATGGATGTTGAAACTATTTCTACAGGCTCCTTGTCTCTTGATATTGCTCTGGGCG
CTGGTGGTTTGCCGATGGGCCGTATCGTTGAGATTTATGGCCCGGAATCTTCCGGTAAAACAACGCTGACCTTACAGGTT
ATTGCTGCCGCTCAGCGTGAAGGCAAAACGTGTGCGTTCATTGATGCTGAGCACGCGTTGGATCCGATTTATGCGAAAAA
GCTTGGCGTAGATATCGATAATCTGCTGTGTTCTCAGCCGGATACCGGCGAGCAAGCGCTGGAAATCTGTGATGCATTAA
CGCGCTCTGGCGCGGTTGACGTTATCATCGTCGACTCCGTTGCGGCACTGACACCGAAAGCAGAAATTGAAGGTGAAATC
GGCGACTCCCACATGGGGCTGGCCGCACGTATGATGAGCCAGGCTATGCGTAAACTGGCGGGTAACCTGAAACAAGCCAA
TACGCTGCTGATTTTCATTAACCAGATTCGTATGAAAATCGGTGTGATGTTCGGTAACCCTGAAACCACTACCGGTGGTA
ACGCTCTGAAGTTTTATGCTTCTGTTCGCCTGGATATTCGTCGTACTGGTGCAATCAAGGAAGGCGAAGAGGTTGTCGGC
AGCGAAACCCGTGTGAAAGTTGTGAAGAATAAAGTGGCAGCACCGTTCAAACAGGCTGAATTCCAAATTCTGTACGGTGA
AGGTATCAATATCCACGGTGAGCTGGTCGATCTGGGTGTGAAACACAAGCTGATCGAAAAAGCGGGTGCCTGGTATAGCT
ATAACGGCGACAAGATCGGTCAGGGTAAAGCAAATGCCTGTAATTTCCTGAAAGAGAACCCGGCTATTGCTGCGGAACTG
GATAAGAAATTGCGTGAAATGCTGCTGCATAAAGGCAATGAGCTGACGCCAGCCGCCGCTGGAAATAGCCATGACGAAGA
TGAATTTGCTGGTGAAGGCAACGAAGAGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.