Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   ACN23B_RS16455 Genome accession   NZ_CP183817
Coordinates   3943042..3944115 (-) Length   357 a.a.
NCBI ID   WP_010997423.1    Uniprot ID   P58552
Organism   Anabaena sp. FACHB-709     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3938042..3949115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN23B_RS16440 (ACN23B_16425) - 3939513..3940193 (+) 681 WP_044523126.1 FHA domain-containing protein -
  ACN23B_RS16445 (ACN23B_16430) - 3940337..3941338 (-) 1002 WP_010997421.1 hypothetical protein -
  ACN23B_RS16450 (ACN23B_16435) - 3941578..3942696 (-) 1119 WP_010997422.1 polysaccharide pyruvyl transferase family protein -
  ACN23B_RS16455 (ACN23B_16440) recA 3943042..3944115 (-) 1074 WP_010997423.1 recombinase RecA Machinery gene
  ACN23B_RS16460 (ACN23B_16445) - 3944539..3945645 (+) 1107 WP_010997424.1 S66 peptidase family protein -
  ACN23B_RS16465 (ACN23B_16450) - 3945741..3946622 (-) 882 WP_010997425.1 UTP--glucose-1-phosphate uridylyltransferase -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 38392.60 Da        Isoelectric Point: 4.8913

>NTDB_id=1106292 ACN23B_RS16455 WP_010997423.1 3943042..3944115(-) (recA) [Anabaena sp. FACHB-709]
MAINTDTSGKQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYGPESSGKTTVAL
HAIAEVQKEGGIAAFVDAEHALDPTYASALGVDIQNLLVSQPDTGESALEIVDQLVRSAAVDIVVIDSVAALVPRAEIEG
DMGDAHVGLQARLMSQALRKITGNIGKSGCTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLKKGTDE
FGNRVKVKVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILIRKGAWYSYNGDNISQGRDNAIKYLEEKPEFSE
QIKQQVREKLDKGAVVSANSVAKNNEDDEDEDVEEEE

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=1106292 ACN23B_RS16455 WP_010997423.1 3943042..3944115(-) (recA) [Anabaena sp. FACHB-709]
ATGGCTATCAATACCGATACTTCTGGCAAGCAAAAAGCGCTGACAATGGTACTCAACCAGATTGAGCGCAGCTTCGGTAA
AGGAGCAATCATGCGCCTGGGCGATGCTACCCGGATGCGGGTAGAAACAATCTCTACTGGCGCGCTCACCTTGGATTTAG
CATTGGGAGGCGGTTTACCCAAGGGGCGGGTGATTGAGATTTATGGCCCGGAAAGTTCCGGTAAAACAACAGTAGCACTC
CACGCGATCGCAGAAGTGCAAAAAGAAGGTGGAATAGCTGCCTTCGTCGATGCTGAACACGCCCTTGACCCCACCTACGC
CTCAGCTTTAGGTGTAGATATTCAAAACTTGCTGGTTTCCCAACCAGACACAGGTGAATCCGCATTGGAAATTGTTGATC
AACTTGTACGCTCCGCCGCCGTTGATATTGTAGTTATTGACTCTGTAGCAGCTTTGGTTCCCCGTGCAGAAATCGAAGGC
GATATGGGTGATGCCCACGTCGGTTTACAAGCGAGATTAATGAGCCAAGCTCTACGTAAAATTACTGGCAATATTGGTAA
ATCTGGTTGTACAGTAATTTTCATTAACCAGTTGCGGCAAAAAATTGGTGTTACCTACGGTAGCCCGGAAACGACAACTG
GCGGTAACGCATTAAAGTTCTATGCTTCAGTACGCTTAGATATTCGTCGGATTCAAACCTTGAAAAAAGGTACTGATGAA
TTTGGTAACCGAGTTAAAGTCAAAGTTGCGAAAAATAAAGTTGCACCGCCTTTTAGAATCGCAGAGTTTGACATTATTTT
TGGTAAAGGTGTTTCGACTCTAGGTTGTTTAGTAGATTTAGCGGAAGAAACTGGTATTCTCATCCGTAAAGGAGCTTGGT
ACAGTTACAACGGTGATAATATTTCTCAAGGTCGAGATAACGCTATCAAATACCTGGAAGAAAAACCAGAATTTAGTGAA
CAAATCAAACAACAGGTGCGTGAAAAATTAGATAAGGGAGCTGTTGTTTCTGCAAACTCGGTAGCTAAAAACAACGAAGA
CGATGAAGATGAAGATGTAGAAGAGGAAGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P58552

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

64.553

97.199

0.627

  recA Pseudomonas stutzeri DSM 10701

63.873

96.919

0.619

  recA Acinetobacter baumannii D1279779

63.768

96.639

0.616

  recA Ralstonia pseudosolanacearum GMI1000

64.329

91.877

0.591

  recA Bacillus subtilis subsp. subtilis str. 168

62.952

92.997

0.585

  recA Neisseria gonorrhoeae MS11

64.375

89.636

0.577

  recA Neisseria gonorrhoeae MS11

64.375

89.636

0.577

  recA Neisseria gonorrhoeae strain FA1090

64.375

89.636

0.577

  recA Glaesserella parasuis strain SC1401

58.857

98.039

0.577

  recA Streptococcus pneumoniae D39

57.465

99.44

0.571

  recA Streptococcus pneumoniae Rx1

57.465

99.44

0.571

  recA Streptococcus pneumoniae R6

57.465

99.44

0.571

  recA Streptococcus pneumoniae TIGR4

57.465

99.44

0.571

  recA Helicobacter pylori 26695

61.446

92.997

0.571

  recA Helicobacter pylori strain NCTC11637

61.446

92.997

0.571

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.551

96.639

0.566

  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.422

90.196

0.563

  recA Vibrio cholerae strain A1552

62.422

90.196

0.563

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.061

91.877

0.552

  recA Streptococcus mitis NCTC 12261

56.977

96.359

0.549

  recA Streptococcus mutans UA159

60.494

90.756

0.549

  recA Latilactobacillus sakei subsp. sakei 23K

61.442

89.356

0.549

  recA Streptococcus mitis SK321

60.062

90.476

0.543

  recA Streptococcus pyogenes NZ131

59.509

91.317

0.543

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

57.704

92.717

0.535

  recA Lactococcus lactis subsp. cremoris KW2

59.133

90.476

0.535


Multiple sequence alignment