Detailed information NTG1106270

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACN6I1_RS03545
• Genome accession: NZ_CP183813
• Coordinates: 799882..800934 (+)
• Length: 350 a.a.
• NCBI ID: WP_419742730.1
• Uniprot ID: -
• Organism: Paraclostridium dentum strain IIB4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 794882..805934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN6I1_RS03530	mnmH	796697..797746 (+)	1050	WP_419742728.1	tRNA 2-selenouridine(34) synthase MnmH	-
ACN6I1_RS03535	rimO	797747..799081 (+)	1335	WP_419742729.1	30S ribosomal protein S12 methylthiotransferase RimO	-
ACN6I1_RS03540	pgsA	799068..799610 (+)	543	WP_021428714.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ACN6I1_RS03545	recA	799882..800934 (+)	1053	WP_419742730.1	recombinase RecA	Machinery gene
ACN6I1_RS03550	rny	801088..802611 (+)	1524	WP_207737825.1	ribonuclease Y	-
ACN6I1_RS03555	-	802747..803670 (+)	924	WP_419742731.1	DUF523 and DUF1722 domain-containing protein	-
ACN6I1_RS03560	-	803735..804013 (+)	279	WP_021432255.1	hypothetical protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37727.19 Da
• Isoelectric Point: 5.0897

>NTDB_id=1106270 ACN6I1_RS03545 WP_419742730.1 799882..800934(+) (recA) [Paraclostridium dentum strain IIB4]
MAGIQDEKLKALNSALSQIEKDFGKGSVMKLGEAKGMAIDVIPTGSIGLDIAIGIGGLPKGRIVEIYGPESSGKTTVTLH
AVAEAQKQGGIAAFIDAEHALDPVYAKALGVDVDNLIVSQPDTGEQALEIAEALIRSGAIDIIVVDSVAALVPKAEIEGD
MGDSHIGLQARLMSQALRKLTGSIKKSNCVAIFINQLREKVGVMFGSPETTTGGRALKFYSSVRLDVRKIDTIKQGDKVM
GSRTRVKVVKNKVAPPFKQCEFDIMYGEGISKVGDLLDIAADLDIIKKSGAWYSYNETRLGQGRENVKKFLEDNKDLTEE
VEGLVRKYYKLDENRDSAEKNEDSVENIGE

Nucleotide

• Length: 1053 bp

>NTDB_id=1106270 ACN6I1_RS03545 WP_419742730.1 799882..800934(+) (recA) [Paraclostridium dentum strain IIB4]
ATGGCAGGAATACAAGATGAAAAATTAAAAGCGCTGAACTCAGCGTTATCTCAGATAGAAAAAGATTTTGGTAAAGGATC
TGTAATGAAACTTGGAGAAGCTAAGGGTATGGCTATAGATGTTATACCAACAGGTTCTATTGGACTTGATATAGCTATAG
GTATAGGAGGTCTTCCGAAGGGTAGAATAGTTGAAATATATGGACCAGAATCTTCTGGTAAGACTACAGTTACTTTACAT
GCAGTAGCAGAAGCTCAAAAACAAGGTGGAATAGCAGCATTTATAGATGCTGAACATGCATTAGATCCAGTATATGCAAA
AGCATTAGGCGTAGATGTTGATAACTTAATAGTTTCACAACCAGATACAGGAGAACAAGCGTTAGAAATAGCAGAAGCAC
TTATAAGAAGTGGTGCTATAGATATAATAGTAGTTGACTCAGTAGCAGCATTAGTTCCAAAAGCGGAAATAGAAGGGGAC
ATGGGAGATTCTCATATTGGTCTTCAAGCAAGACTTATGTCGCAAGCTTTAAGAAAGCTAACAGGATCTATAAAAAAATC
TAATTGTGTAGCAATATTTATAAACCAGTTAAGAGAGAAAGTTGGAGTTATGTTTGGTAGCCCAGAAACTACAACAGGTG
GTCGTGCTCTTAAATTCTACTCTTCAGTAAGACTAGATGTTAGAAAAATAGACACTATAAAACAAGGCGATAAAGTTATG
GGAAGTAGAACAAGAGTAAAAGTTGTTAAAAACAAGGTTGCACCTCCATTTAAACAATGTGAATTTGACATAATGTATGG
AGAAGGTATATCAAAGGTTGGGGACCTATTAGATATAGCTGCAGATTTAGACATAATTAAAAAATCAGGAGCTTGGTATA
GTTATAACGAGACTAGATTAGGACAAGGTAGAGAAAATGTTAAAAAGTTCTTAGAAGATAATAAGGATTTAACAGAAGAA
GTAGAAGGTTTAGTAAGAAAATATTACAAATTAGATGAAAATAGAGACAGCGCAGAGAAAAATGAAGATTCAGTAGAAAA
TATTGGAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (10-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	70.988	92.571	0.657
recA	Streptococcus mitis SK321	65.896	98.857	0.651
recA	Streptococcus mitis NCTC 12261	65.607	98.857	0.649
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	68.389	94	0.643
recA	Streptococcus mutans UA159	66.176	97.143	0.643
recA	Streptococcus pneumoniae D39	64.912	97.714	0.634
recA	Streptococcus pneumoniae Rx1	64.912	97.714	0.634
recA	Streptococcus pneumoniae R6	64.912	97.714	0.634
recA	Streptococcus pneumoniae TIGR4	64.912	97.714	0.634
recA	Streptococcus pyogenes NZ131	67.385	92.857	0.626
recA	Acinetobacter baylyi ADP1	63.93	97.429	0.623
recA	Neisseria gonorrhoeae strain FA1090	66.975	92.571	0.62
recA	Neisseria gonorrhoeae MS11	66.975	92.571	0.62
recA	Neisseria gonorrhoeae MS11	66.975	92.571	0.62
recA	Latilactobacillus sakei subsp. sakei 23K	66.154	92.857	0.614
recA	Lactococcus lactis subsp. cremoris KW2	63.988	96	0.614
recA	Acinetobacter baumannii D1279779	66.77	92	0.614
recA	Glaesserella parasuis strain SC1401	64.134	94	0.603
recA	Pseudomonas stutzeri DSM 10701	65.015	92.286	0.6
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.517	91.143	0.597
recA	Ralstonia pseudosolanacearum GMI1000	66.774	88.571	0.591
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.934	94.571	0.586
recA	Vibrio cholerae strain A1552	61.934	94.571	0.586
recA	Helicobacter pylori 26695	64.263	91.143	0.586
recA	Helicobacter pylori strain NCTC11637	64.263	91.143	0.586
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.342	90.286	0.563