Detailed information NTG1106092

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACM592_RS09275
• Genome accession: NZ_CP183792
• Coordinates: 1968658..1969707 (-)
• Length: 349 a.a.
• NCBI ID: WP_029377444.1
• Uniprot ID: -
• Organism: Staphylococcus sp. Ze3
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1967388..1968529	1968658..1969707	flank	129

Gene organization within MGE regions

Location: 1967388..1969707

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM592_RS09270 (ACM592_09270)	-	1967388..1968529 (+)	1142	WP_107539410.1	IS3 family transposase	-
ACM592_RS09275 (ACM592_09275)	recA	1968658..1969707 (-)	1050	WP_029377444.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37689.63 Da
• Isoelectric Point: 5.0032

>NTDB_id=1106092 ACM592_RS09275 WP_029377444.1 1968658..1969707(-) (recA) [Staphylococcus sp. Ze3]
MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNEARKVSSVSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
EVQRNGGVAAFIDAEHALDPVYAEALGVDIQNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAVFINQIREKVGVMFGNPEVTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGKGISKEGELIDLGVENEIVDKSGAWYSYNGDRMGQGKENVKSYLKENPAVKAEIDR
KLREKLGIFDGDVEEPEANNTASLLDEEE

Nucleotide

• Length: 1050 bp

>NTDB_id=1106092 ACM592_RS09275 WP_029377444.1 1968658..1969707(-) (recA) [Staphylococcus sp. Ze3]
TTGGATAACGATCGTCAAAAGGCTTTAGATACAGTAATTAAAAATATGGAGAAATCATTTGGTAAAGGCGCGGTAATGAA
ATTGGGTGATAACGAGGCACGCAAAGTTTCAAGTGTTTCAAGTGGTTCTGTAACATTAGATAATGCTTTAGGAGTAGGTG
GTTACCCTAAGGGTAGAATCATAGAAATTTATGGTCCAGAAAGTTCTGGTAAAACGACTGTGGCTCTTCATGCCATTGCG
GAAGTTCAAAGAAATGGAGGCGTGGCAGCTTTTATTGACGCTGAACACGCATTAGACCCAGTTTACGCAGAAGCATTGGG
TGTTGATATTCAAAATTTATACCTATCTCAACCTGACCATGGGGAACAAGGTTTAGAGATTGCAGAAGCTTTTGTTAGAA
GTGGAGCTGTAGACATAGTTGTTGTTGATTCCGTTGCAGCATTAACACCTAAAGCAGAAATTGAAGGTGAAATGGGAGAT
ACACACGTTGGTTTACAAGCGCGTTTGATGTCACAAGCCCTAAGAAAACTTTCAGGAGCGATATCTAAATCAAATACGAC
AGCCGTATTTATTAACCAAATTCGTGAGAAAGTCGGTGTTATGTTCGGTAATCCTGAAGTTACACCAGGTGGCCGTGCAC
TGAAATTCTACAGTTCTGTTCGTTTAGAAGTACGCCGTGCAGAACAATTAAAACAAGGACAAGATATTGTCGGTAATAGA
ACTAAAATTAAAGTTGTTAAGAATAAAGTGGCACCACCATTTAGAGTTGCTGAAGTCGATATTATGTATGGTAAAGGTAT
CTCTAAAGAGGGAGAATTGATCGATTTAGGTGTTGAAAATGAAATCGTTGATAAGTCAGGTGCTTGGTATTCTTATAATG
GCGACAGAATGGGACAAGGTAAAGAAAACGTAAAATCTTACCTTAAAGAAAACCCTGCTGTCAAAGCAGAAATAGATAGA
AAACTAAGAGAAAAATTAGGAATATTTGATGGAGATGTTGAAGAGCCAGAAGCTAACAATACAGCGTCACTTTTGGATGA
AGAAGAATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	76.074	93.41	0.711
recA	Latilactobacillus sakei subsp. sakei 23K	71.037	93.983	0.668
recA	Streptococcus pneumoniae D39	63.793	99.713	0.636
recA	Streptococcus pneumoniae Rx1	63.793	99.713	0.636
recA	Streptococcus pneumoniae R6	63.793	99.713	0.636
recA	Streptococcus pneumoniae TIGR4	63.793	99.713	0.636
recA	Streptococcus pyogenes NZ131	67.173	94.269	0.633
recA	Streptococcus mutans UA159	62.857	100	0.63
recA	Streptococcus mitis SK321	65.465	95.415	0.625
recA	Lactococcus lactis subsp. cremoris KW2	65.257	94.842	0.619
recA	Streptococcus mitis NCTC 12261	64.865	95.415	0.619
recA	Neisseria gonorrhoeae MS11	65.35	94.269	0.616
recA	Neisseria gonorrhoeae MS11	65.35	94.269	0.616
recA	Neisseria gonorrhoeae strain FA1090	65.35	94.269	0.616
recA	Helicobacter pylori 26695	64.939	93.983	0.61
recA	Acinetobacter baylyi ADP1	65.031	93.41	0.607
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.438	94.269	0.607
recA	Helicobacter pylori strain NCTC11637	64.634	93.983	0.607
recA	Acinetobacter baumannii D1279779	64.724	93.41	0.605
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.417	93.41	0.602
recA	Vibrio cholerae strain A1552	64.417	93.41	0.602
recA	Ralstonia pseudosolanacearum GMI1000	64.856	89.685	0.582
recA	Glaesserella parasuis strain SC1401	58.261	98.854	0.576
recA	Pseudomonas stutzeri DSM 10701	61.656	93.41	0.576
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.121	94.842	0.57
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.502	91.404	0.553